RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 C5orf38Q86SI9 138 aa5.99□□□□□ -1.45
RAPGEF1-205ENST00000419442 MRAP2Q96G30 205 aa5.99□□□□□ -1.45
RAPGEF1-205ENST00000419442 CNFNQ9BYD5 112 aa5.99□□□□□ -1.45
RAPGEF1-205ENST00000419442 C6orf48Q9UBA6 75 aa5.99□□□□□ -1.45
RAPGEF1-205ENST00000419442 TRBV6-5A0A0K0K1A5 114 aa5.98□□□□□ -1.45
RAPGEF1-205ENST00000419442 NDUFA1O15239 70 aa5.98□□□□□ -1.45
RAPGEF1-205ENST00000419442 CTRLP40313 264 aa5.98□□□□□ -1.45
RAPGEF1-205ENST00000419442 SEC61BP60468 96 aaKnown RBP5.98□□□□□ -1.45
RAPGEF1-205ENST00000419442 KRTAP13-3Q3SY46 172 aa5.98□□□□□ -1.45
RAPGEF1-205ENST00000419442 GAGE2EQ4V326 116 aa5.98□□□□□ -1.45
RAPGEF1-205ENST00000419442 C10orf91Q5T1B1 145 aa5.98□□□□□ -1.45
RAPGEF1-205ENST00000419442 RPL7L1Q6DKI1 246 aaKnown RBP5.98□□□□□ -1.45
RAPGEF1-205ENST00000419442 LYZL1Q6UWQ5 148 aa5.98□□□□□ -1.45
RAPGEF1-205ENST00000419442 CYTL1Q9NRR1 136 aa5.98□□□□□ -1.45
RAPGEF1-205ENST00000419442 GAGE2DQ9UEU5 116 aa5.98□□□□□ -1.45
RAPGEF1-205ENST00000419442 LOC105371267A0A1B0GV96 52 aa5.97□□□□□ -1.45
RAPGEF1-205ENST00000419442 PMCHP20382 165 aa5.97□□□□□ -1.45
RAPGEF1-205ENST00000419442 RPL28P46779 137 aaKnown RBP5.97□□□□□ -1.45
RAPGEF1-205ENST00000419442 BLOC1S1P78537 153 aa5.97□□□□□ -1.45
RAPGEF1-205ENST00000419442 FAM229BQ4G0N7 80 aa5.97□□□□□ -1.45
RAPGEF1-205ENST00000419442 C9orf129Q5T035 196 aaKnown RBP5.97□□□□□ -1.45
RAPGEF1-205ENST00000419442 AKR1C8PQ5T2L2 129 aa5.97□□□□□ -1.45
RAPGEF1-205ENST00000419442 FP248Q71RG6 208 aaPredicted RBP5.97□□□□□ -1.45
RAPGEF1-205ENST00000419442 CTDSP1Q9GZU7 261 aa5.97□□□□□ -1.45
RAPGEF1-205ENST00000419442 CSDC2Q9Y534 153 aaKnown RBP5.97□□□□□ -1.45
RAPGEF1-205ENST00000419442 KRTAP10-6P60371 365 aaPredicted RBP5.96□□□□□ -1.46
RAPGEF1-205ENST00000419442 UNQ6190/PRO20217Q6UXQ8 127 aa5.96□□□□□ -1.46
RAPGEF1-205ENST00000419442 ANAPC11Q9NYG5 84 aa5.96□□□□□ -1.46
RAPGEF1-205ENST00000419442 TMEM218A2RU14 115 aa5.95□□□□□ -1.46
RAPGEF1-205ENST00000419442 XKRY2A2RUG3 117 aa5.95□□□□□ -1.46
RAPGEF1-205ENST00000419442 RPL35P42766 123 aaKnown RBP5.95□□□□□ -1.46
RAPGEF1-205ENST00000419442 LINC00337Q8N6G1 96 aa5.95□□□□□ -1.46
RAPGEF1-205ENST00000419442 ORAOV1Q8WV07 137 aa5.95□□□□□ -1.46
RAPGEF1-205ENST00000419442 TMEM242Q9NWH2 141 aa5.95□□□□□ -1.46
RAPGEF1-205ENST00000419442 BORCS7-ASMTA0A0B4J1R7 106 aa5.94□□□□□ -1.46
RAPGEF1-205ENST00000419442 TRAV13-1A0A0B4J241 112 aa5.94□□□□□ -1.46
RAPGEF1-205ENST00000419442 C7orf77A4D0Y5 90 aa5.94□□□□□ -1.46
RAPGEF1-205ENST00000419442 TRIAP1O43715 76 aa5.94□□□□□ -1.46
RAPGEF1-205ENST00000419442 BCE1O60756 84 aa5.94□□□□□ -1.46
RAPGEF1-205ENST00000419442 IFNA1P01562 189 aa5.94□□□□□ -1.46
RAPGEF1-205ENST00000419442 TWIST1Q15672 202 aa5.94□□□□□ -1.46
RAPGEF1-205ENST00000419442 SVBPQ8N300 66 aa5.94□□□□□ -1.46
RAPGEF1-205ENST00000419442 SEC11CQ9BY50 192 aa5.94□□□□□ -1.46
RAPGEF1-205ENST00000419442 RNASE7Q9H1E1 156 aaKnown RBP5.94□□□□□ -1.46
RAPGEF1-205ENST00000419442 IGHV3OR16-9A0A0B4J2B5 98 aa5.93□□□□□ -1.46
RAPGEF1-205ENST00000419442 NDUFC2-KCTD14E9PQ53 114 aa5.93□□□□□ -1.46
RAPGEF1-205ENST00000419442 POLR2KP53803 58 aaKnown RBP5.93□□□□□ -1.46
RAPGEF1-205ENST00000419442 C11orf52Q96A22 123 aa5.93□□□□□ -1.46
RAPGEF1-205ENST00000419442 UBE2D4Q9Y2X8 147 aa5.93□□□□□ -1.46
RAPGEF1-205ENST00000419442 TRBV27A0A0K0K1C4 114 aa5.92□□□□□ -1.46
RAPGEF1-205ENST00000419442 KIAA0087Q14695 138 aa5.92□□□□□ -1.46
RAPGEF1-205ENST00000419442 CENPWQ5EE01 88 aa5.92□□□□□ -1.46
RAPGEF1-205ENST00000419442 RNASE13Q5GAN3 156 aaKnown RBP5.92□□□□□ -1.46
RAPGEF1-205ENST00000419442 SMIM12Q96EX1 92 aa5.92□□□□□ -1.46
RAPGEF1-205ENST00000419442 C22orf24Q9Y442 160 aa5.92□□□□□ -1.46
RAPGEF1-205ENST00000419442 TRBV30A0A0K0K1B3 111 aa5.91□□□□□ -1.46
RAPGEF1-205ENST00000419442 SNAPINO95295 136 aa5.91□□□□□ -1.46
RAPGEF1-205ENST00000419442 FOXA3P55318 350 aaPredicted RBP5.91□□□□□ -1.46
RAPGEF1-205ENST00000419442 LBHQ53QV2 105 aaPredicted RBP5.91□□□□□ -1.46
RAPGEF1-205ENST00000419442 Q6ZUT4 128 aa5.91□□□□□ -1.46
RAPGEF1-205ENST00000419442 KRTAP13-1Q8IUC0 172 aa5.91□□□□□ -1.46
RAPGEF1-205ENST00000419442 MBD3L1Q8WWY6 194 aa5.91□□□□□ -1.46
RAPGEF1-205ENST00000419442 ST20Q9HBF5 79 aa5.91□□□□□ -1.46
RAPGEF1-205ENST00000419442 UMAD1C9J7I0 102 aa5.9□□□□□ -1.46
RAPGEF1-205ENST00000419442 SCO1O75880 301 aa5.9□□□□□ -1.46
RAPGEF1-205ENST00000419442 SCGB1D1O95968 90 aa5.9□□□□□ -1.46
RAPGEF1-205ENST00000419442 APOC3P02656 99 aa5.9□□□□□ -1.46
RAPGEF1-205ENST00000419442 TIMM21Q9BVV7 248 aa5.9□□□□□ -1.46
RAPGEF1-205ENST00000419442 TP73-AS1Q9UF72 201 aa5.9□□□□□ -1.46
RAPGEF1-205ENST00000419442 IGKV2D-26A0A0A0MRZ7 120 aa5.89□□□□□ -1.47
RAPGEF1-205ENST00000419442 SMAGPQ0VAQ4 97 aa5.89□□□□□ -1.47
RAPGEF1-205ENST00000419442 PEA15Q15121 130 aa5.89□□□□□ -1.47
RAPGEF1-205ENST00000419442 PACRGQ96M98 296 aaPredicted RBP5.89□□□□□ -1.47
RAPGEF1-205ENST00000419442 PCP4P48539 62 aa5.88□□□□□ -1.47
RAPGEF1-205ENST00000419442 LINC00310P59036 64 aa5.88□□□□□ -1.47
RAPGEF1-205ENST00000419442 CCL20P78556 96 aa5.88□□□□□ -1.47
RAPGEF1-205ENST00000419442 SPAG11AQ6PDA7 123 aa5.88□□□□□ -1.47
RAPGEF1-205ENST00000419442 SMIM15Q7Z3B0 74 aa5.88□□□□□ -1.47
RAPGEF1-205ENST00000419442 SFT2D1Q8WV19 159 aa5.88□□□□□ -1.47
RAPGEF1-205ENST00000419442 F8W036 122 aa5.87□□□□□ -1.47
RAPGEF1-205ENST00000419442 FAM104AQ969W3 186 aa5.87□□□□□ -1.47
RAPGEF1-205ENST00000419442 TRBV20OR9-2A0A075B6H5 130 aa5.86□□□□□ -1.47
RAPGEF1-205ENST00000419442 ADCYAP1P18509 176 aa5.86□□□□□ -1.47
RAPGEF1-205ENST00000419442 GNG4P50150 75 aa5.86□□□□□ -1.47
RAPGEF1-205ENST00000419442 XP32Q5T750 250 aa5.86□□□□□ -1.47
RAPGEF1-205ENST00000419442 C2orf82Q6UX34 121 aa5.86□□□□□ -1.47
RAPGEF1-205ENST00000419442 MRPL55Q7Z7F7 128 aaKnown RBP5.86□□□□□ -1.47
RAPGEF1-205ENST00000419442 BIN3Q9NQY0 253 aa5.86□□□□□ -1.47
RAPGEF1-205ENST00000419442 SMCO4Q9NRQ5 59 aa5.86□□□□□ -1.47
RAPGEF1-205ENST00000419442 A0A1B0GV50 99 aa5.85□□□□□ -1.47
RAPGEF1-205ENST00000419442 ZNF727A8MUV8 499 aa5.85□□□□□ -1.47
RAPGEF1-205ENST00000419442 VCYO14598 125 aa5.84□□□□□ -1.47
RAPGEF1-205ENST00000419442 FCER1GP30273 86 aa5.84□□□□□ -1.47
RAPGEF1-205ENST00000419442 RHEBQ15382 184 aa5.84□□□□□ -1.47
RAPGEF1-205ENST00000419442 FAM74A3Q4VXF1 159 aa5.84□□□□□ -1.47
RAPGEF1-205ENST00000419442 C3orf22Q8N5N4 141 aa5.84□□□□□ -1.47
RAPGEF1-205ENST00000419442 FAM213BQ8TBF2 198 aa5.84□□□□□ -1.47
RAPGEF1-205ENST00000419442 GAGE10A6NGK3 116 aa5.83□□□□□ -1.48
RAPGEF1-205ENST00000419442 MT-ND4LP03901 98 aa5.83□□□□□ -1.48
RAPGEF1-205ENST00000419442 TAGLN2P37802 199 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms