RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 PSMB8P28062 276 aa5.72□□□□□ -1.49
HMGXB4-202ENST00000418170 TRAV23DV6A0A075B6W5 121 aa5.71□□□□□ -1.49
HMGXB4-202ENST00000418170 MAP1AP78559 2803 aaPredicted RBP5.71□□□□□ -1.5
HMGXB4-202ENST00000418170 NCOR2Q9Y618 2525 aa5.71□□□□□ -1.5
HMGXB4-202ENST00000418170 ANK3Q12955 4377 aaKnown RBP5.71□□□□□ -1.5
HMGXB4-202ENST00000418170 LY6EQ16553 131 aa5.71□□□□□ -1.5
HMGXB4-202ENST00000418170 C20orf197Q8N268 126 aa5.71□□□□□ -1.5
HMGXB4-202ENST00000418170 SERP1Q9Y6X1 66 aa5.71□□□□□ -1.5
HMGXB4-202ENST00000418170 PTPRZ1P23471 2315 aaPredicted RBP5.71□□□□□ -1.5
HMGXB4-202ENST00000418170 PRM2P04554 102 aa5.71□□□□□ -1.5
HMGXB4-202ENST00000418170 BLCAPP62952 87 aa5.71□□□□□ -1.5
HMGXB4-202ENST00000418170 CFHR3Q02985 330 aa5.71□□□□□ -1.5
HMGXB4-202ENST00000418170 LYPD5Q6UWN5 251 aa5.71□□□□□ -1.5
HMGXB4-202ENST00000418170 XCL1P47992 114 aa5.7□□□□□ -1.5
HMGXB4-202ENST00000418170 BRD3OSQ6XYD6 125 aa5.7□□□□□ -1.5
HMGXB4-202ENST00000418170 LINC00336Q6ZUF6 198 aa5.7□□□□□ -1.5
HMGXB4-202ENST00000418170 Q96MF0 132 aa5.7□□□□□ -1.5
HMGXB4-202ENST00000418170 XCL2Q9UBD3 114 aa5.7□□□□□ -1.5
HMGXB4-202ENST00000418170 ZANQ9Y493 2812 aa5.7□□□□□ -1.5
HMGXB4-202ENST00000418170 MXRA5Q9NR99 2828 aa5.7□□□□□ -1.5
HMGXB4-202ENST00000418170 PKD1L2Q7Z442 2459 aa5.7□□□□□ -1.5
HMGXB4-202ENST00000418170 WFDC9Q8NEX5 89 aa5.7□□□□□ -1.5
HMGXB4-202ENST00000418170 ORMDL1Q9P0S3 153 aa5.7□□□□□ -1.5
HMGXB4-202ENST00000418170 RPL36AP83881 106 aaKnown RBP5.69□□□□□ -1.5
HMGXB4-202ENST00000418170 FAM19A1Q7Z5A9 133 aa5.69□□□□□ -1.5
HMGXB4-202ENST00000418170 RPL36ALQ969Q0 106 aaKnown RBP5.69□□□□□ -1.5
HMGXB4-202ENST00000418170 KMT2BQ9UMN6 2715 aaPredicted RBP5.69□□□□□ -1.5
HMGXB4-202ENST00000418170 TRBV10-3A0A0K0K1G6 114 aa5.69□□□□□ -1.5
HMGXB4-202ENST00000418170 A6NDX4 124 aa5.69□□□□□ -1.5
HMGXB4-202ENST00000418170 H7BZZ5 65 aa5.69□□□□□ -1.5
HMGXB4-202ENST00000418170 SLPIP03973 132 aa5.69□□□□□ -1.5
HMGXB4-202ENST00000418170 BPESC1Q9GZL8 116 aa5.69□□□□□ -1.5
HMGXB4-202ENST00000418170 CDC42SE2Q9NRR3 84 aa5.69□□□□□ -1.5
HMGXB4-202ENST00000418170 CCL18P55774 89 aa5.69□□□□□ -1.5
HMGXB4-202ENST00000418170 ABCA2Q9BZC7 2435 aa5.69□□□□□ -1.5
HMGXB4-202ENST00000418170 SPTAN1Q13813 2472 aaKnown RBP5.69□□□□□ -1.5
HMGXB4-202ENST00000418170 H3BUX3 64 aa5.69□□□□□ -1.5
HMGXB4-202ENST00000418170 CCL21O00585 134 aa5.69□□□□□ -1.5
HMGXB4-202ENST00000418170 ENHOQ6UWT2 76 aa5.69□□□□□ -1.5
HMGXB4-202ENST00000418170 C11orf72Q8NBR9 251 aa5.69□□□□□ -1.5
HMGXB4-202ENST00000418170 A8MTW9 85 aa5.68□□□□□ -1.5
HMGXB4-202ENST00000418170 JMJD7-PLA2G4BH0Y9G9 81 aa5.68□□□□□ -1.5
HMGXB4-202ENST00000418170 COX7B2Q8TF08 81 aa5.68□□□□□ -1.5
HMGXB4-202ENST00000418170 J3QLI3 93 aa5.67□□□□□ -1.5
HMGXB4-202ENST00000418170 LINC00158P58513 81 aa5.67□□□□□ -1.5
HMGXB4-202ENST00000418170 NTM-AS1Q6ZSK4 140 aa5.67□□□□□ -1.5
HMGXB4-202ENST00000418170 HIVEP3Q5T1R4 2406 aa5.67□□□□□ -1.5
HMGXB4-202ENST00000418170 A0A1W2PPR1 153 aa5.67□□□□□ -1.5
HMGXB4-202ENST00000418170 BCE1O60756 84 aa5.67□□□□□ -1.5
HMGXB4-202ENST00000418170 LINC00167Q96N53 147 aa5.67□□□□□ -1.5
HMGXB4-202ENST00000418170 TRAV7A0A075B6U4 112 aa5.66□□□□□ -1.5
HMGXB4-202ENST00000418170 LY6G6DO95868 133 aa5.66□□□□□ -1.5
HMGXB4-202ENST00000418170 C16orf95Q9H693 158 aa5.66□□□□□ -1.5
HMGXB4-202ENST00000418170 KLKP1Q107X0 134 aa5.66□□□□□ -1.5
HMGXB4-202ENST00000418170 C1orf43Q9BWL3 253 aa5.66□□□□□ -1.5
HMGXB4-202ENST00000418170 PDZD2O15018 2839 aa5.66□□□□□ -1.5
HMGXB4-202ENST00000418170 IBA57-AS1B1ANH7 110 aa5.66□□□□□ -1.5
HMGXB4-202ENST00000418170 UBL5Q9BZL1 73 aa5.66□□□□□ -1.5
HMGXB4-202ENST00000418170 CENPEQ02224 2701 aa5.65□□□□□ -1.5
HMGXB4-202ENST00000418170 AKAP6Q13023 2319 aa5.65□□□□□ -1.5
HMGXB4-202ENST00000418170 TMEM89A2RUT3 159 aa5.65□□□□□ -1.5
HMGXB4-202ENST00000418170 IGHV4-38-2P0DP08 117 aa5.65□□□□□ -1.5
HMGXB4-202ENST00000418170 TOMM7Q9P0U1 55 aa5.65□□□□□ -1.5
HMGXB4-202ENST00000418170 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.65□□□□□ -1.52e-6■■■■■ 33.4
HMGXB4-202ENST00000418170 SMIM26A0A096LP01 95 aa5.65□□□□□ -1.51
HMGXB4-202ENST00000418170 TRBV6-4A0A1B0GX49 114 aa5.65□□□□□ -1.51
HMGXB4-202ENST00000418170 PAX4O43316 350 aa5.65□□□□□ -1.51
HMGXB4-202ENST00000418170 DEFB131AP59861 70 aa5.65□□□□□ -1.51
HMGXB4-202ENST00000418170 ADORA2A-AS1P86434 159 aa5.65□□□□□ -1.51
HMGXB4-202ENST00000418170 FP248Q71RG6 208 aaPredicted RBP5.65□□□□□ -1.51
HMGXB4-202ENST00000418170 TMEM256-PLSCR3K7ERE1 68 aa5.64□□□□□ -1.51
HMGXB4-202ENST00000418170 SPTA1P02549 2419 aa5.64□□□□□ -1.51
HMGXB4-202ENST00000418170 TRBV10-1A0A0K0K1A3 114 aa5.64□□□□□ -1.51
HMGXB4-202ENST00000418170 F8WDY8 70 aa5.64□□□□□ -1.51
HMGXB4-202ENST00000418170 K7EQD1 137 aa5.64□□□□□ -1.51
HMGXB4-202ENST00000418170 USP9XQ93008 2570 aaPredicted RBP5.64□□□□□ -1.51
HMGXB4-202ENST00000418170 RPL35AP18077 110 aaKnown RBP5.63□□□□□ -1.51
HMGXB4-202ENST00000418170 C10orf99Q6UWK7 81 aa5.63□□□□□ -1.51
HMGXB4-202ENST00000418170 Q8N814 137 aa5.63□□□□□ -1.51
HMGXB4-202ENST00000418170 TMEM86BQ8N661 226 aa5.63□□□□□ -1.51
HMGXB4-202ENST00000418170 APCP25054 2843 aa5.63□□□□□ -1.51
HMGXB4-202ENST00000418170 UBE2L6O14933 153 aa5.62□□□□□ -1.51
HMGXB4-202ENST00000418170 AVPP01185 164 aa5.62□□□□□ -1.51
HMGXB4-202ENST00000418170 INSP01308 110 aa5.62□□□□□ -1.51
HMGXB4-202ENST00000418170 LINC00482Q8N8I6 264 aa5.62□□□□□ -1.51
HMGXB4-202ENST00000418170 IGHV3OR16-9A0A0B4J2B5 98 aa5.61□□□□□ -1.51
HMGXB4-202ENST00000418170 PKIGQ9Y2B9 76 aa5.61□□□□□ -1.51
HMGXB4-202ENST00000418170 CREBBPQ92793 2442 aa5.61□□□□□ -1.51
HMGXB4-202ENST00000418170 A0A096LNT2 108 aa5.61□□□□□ -1.51
HMGXB4-202ENST00000418170 Q6ZTI0 123 aa5.61□□□□□ -1.51
HMGXB4-202ENST00000418170 NBASA2RRP1 2371 aa5.61□□□□□ -1.51
HMGXB4-202ENST00000418170 F8WEM9 126 aa5.61□□□□□ -1.51
HMGXB4-202ENST00000418170 NANOS2P60321 138 aaKnown RBP5.61□□□□□ -1.51
HMGXB4-202ENST00000418170 SNURFQ9Y675 71 aa5.61□□□□□ -1.51
HMGXB4-202ENST00000418170 WFDC11Q8NEX6 87 aa5.6□□□□□ -1.51
HMGXB4-202ENST00000418170 IL17DQ8TAD2 202 aa5.6□□□□□ -1.51
HMGXB4-202ENST00000418170 RMI2Q96E14 147 aa5.6□□□□□ -1.51
HMGXB4-202ENST00000418170 TRGV1A0A0A0MS02 117 aa5.6□□□□□ -1.51
HMGXB4-202ENST00000418170 A0A087WZ39 114 aa5.6□□□□□ -1.51
HMGXB4-202ENST00000418170 LINC01547P58512 204 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms