RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 TRBV6-8A0A0A6YYG3 113 aa3.96□□□□□ -1.78
NIFKP3-201ENST00000417799 IGHV1-24A0A0C4DH33 117 aa3.96□□□□□ -1.78
NIFKP3-201ENST00000417799 F8WDY8 70 aa3.96□□□□□ -1.78
NIFKP3-201ENST00000417799 NUPR1O60356 82 aa3.96□□□□□ -1.78
NIFKP3-201ENST00000417799 S100A6P06703 90 aa3.96□□□□□ -1.78
NIFKP3-201ENST00000417799 ESDP10768 282 aa3.96□□□□□ -1.78
NIFKP3-201ENST00000417799 ESRGQ1W209 222 aa3.96□□□□□ -1.78
NIFKP3-201ENST00000417799 LELP1Q5T871 98 aa3.96□□□□□ -1.78
NIFKP3-201ENST00000417799 CHCHD7Q9BUK0 85 aa3.96□□□□□ -1.78
NIFKP3-201ENST00000417799 TRAV8-6A0A0B4J262 113 aa3.95□□□□□ -1.78
NIFKP3-201ENST00000417799 C3orf84H3BNL1 204 aa3.95□□□□□ -1.78
NIFKP3-201ENST00000417799 HSBP1O75506 76 aa3.95□□□□□ -1.78
NIFKP3-201ENST00000417799 G0S2P27469 103 aa3.95□□□□□ -1.78
NIFKP3-201ENST00000417799 CCL18P55774 89 aa3.95□□□□□ -1.78
NIFKP3-201ENST00000417799 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
NIFKP3-201ENST00000417799 C2orf66Q6UXQ4 117 aa3.95□□□□□ -1.78
NIFKP3-201ENST00000417799 C20orf203Q8NBC4 194 aa3.95□□□□□ -1.78
NIFKP3-201ENST00000417799 TMEM243Q9BU79 118 aa3.95□□□□□ -1.78
NIFKP3-201ENST00000417799 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.94□□□□□ -1.78
NIFKP3-201ENST00000417799 A0A096LNJ9 63 aa3.94□□□□□ -1.78
NIFKP3-201ENST00000417799 IGKV2-29A2NJV5 120 aaPredicted RBP3.94□□□□□ -1.78
NIFKP3-201ENST00000417799 LINC01549A6NIU2 74 aa3.94□□□□□ -1.78
NIFKP3-201ENST00000417799 UBE2L6O14933 153 aa3.94□□□□□ -1.78
NIFKP3-201ENST00000417799 HBDP02042 147 aa3.94□□□□□ -1.78
NIFKP3-201ENST00000417799 RPL39P62891 51 aaKnown RBP3.94□□□□□ -1.78
NIFKP3-201ENST00000417799 SMAGPQ0VAQ4 97 aa3.94□□□□□ -1.78
NIFKP3-201ENST00000417799 PMCHL1Q16048 86 aa3.94□□□□□ -1.78
NIFKP3-201ENST00000417799 CASC10Q5T4H9 136 aa3.94□□□□□ -1.78
NIFKP3-201ENST00000417799 FAM19A2Q8N3H0 131 aa3.94□□□□□ -1.78
NIFKP3-201ENST00000417799 TOMM6Q96B49 74 aa3.94□□□□□ -1.78
NIFKP3-201ENST00000417799 CYSLTR1Q9Y271 337 aa3.94□□□□□ -1.78
NIFKP3-201ENST00000417799 MRPS16Q9Y3D3 137 aaKnown RBP3.94□□□□□ -1.78
NIFKP3-201ENST00000417799 LINC00588Q9Y4M8 146 aa3.94□□□□□ -1.78
NIFKP3-201ENST00000417799 DNAH7Q8WXX0 4024 aa3.94□□□□□ -1.78
NIFKP3-201ENST00000417799 TMEM262E9PQX1 116 aa3.93□□□□□ -1.78
NIFKP3-201ENST00000417799 FGF6P10767 208 aa3.93□□□□□ -1.78
NIFKP3-201ENST00000417799 DSCR10P59022 87 aa3.93□□□□□ -1.78
NIFKP3-201ENST00000417799 PKIAP61925 76 aa3.93□□□□□ -1.78
NIFKP3-201ENST00000417799 PDZD11Q5EBL8 140 aa3.93□□□□□ -1.78
NIFKP3-201ENST00000417799 AMMECR1LQ6DCA0 310 aa3.93□□□□□ -1.78
NIFKP3-201ENST00000417799 ERASQ7Z444 233 aa3.93□□□□□ -1.78
NIFKP3-201ENST00000417799 MRPL52Q86TS9 123 aaKnown RBP3.93□□□□□ -1.78
NIFKP3-201ENST00000417799 UBE2DNLQ8IWF7 75 aa3.93□□□□□ -1.78
NIFKP3-201ENST00000417799 HIST3H2BBQ8N257 126 aa3.93□□□□□ -1.78
NIFKP3-201ENST00000417799 SCGB3A1Q96QR1 104 aa3.93□□□□□ -1.78
NIFKP3-201ENST00000417799 UPK3BQ9BT76 320 aa3.93□□□□□ -1.78
NIFKP3-201ENST00000417799 TIMM21Q9BVV7 248 aa3.93□□□□□ -1.78
NIFKP3-201ENST00000417799 SPANXA1Q9NS26 97 aa3.93□□□□□ -1.78
NIFKP3-201ENST00000417799 UBE2D4Q9Y2X8 147 aa3.93□□□□□ -1.78
NIFKP3-201ENST00000417799 A0A087WX48 190 aa3.92□□□□□ -1.78
NIFKP3-201ENST00000417799 IGIPA6NJ69 53 aa3.92□□□□□ -1.78
NIFKP3-201ENST00000417799 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.92□□□□□ -1.78
NIFKP3-201ENST00000417799 SIVA1O15304 175 aa3.92□□□□□ -1.78
NIFKP3-201ENST00000417799 LEPROTL1O95214 131 aa3.92□□□□□ -1.78
NIFKP3-201ENST00000417799 FABP4P15090 132 aa3.92□□□□□ -1.78
NIFKP3-201ENST00000417799 ZNF25P17030 456 aaPredicted RBP3.92□□□□□ -1.78
NIFKP3-201ENST00000417799 S100A2P29034 98 aa3.92□□□□□ -1.78
NIFKP3-201ENST00000417799 RBX1P62877 108 aa3.92□□□□□ -1.78
NIFKP3-201ENST00000417799 WFDC10BQ8IUB3 73 aa3.92□□□□□ -1.78
NIFKP3-201ENST00000417799 OR5A1Q8NGJ0 315 aa3.92□□□□□ -1.78
NIFKP3-201ENST00000417799 TMEM141Q96I45 108 aa3.92□□□□□ -1.78
NIFKP3-201ENST00000417799 TMEM101Q96IK0 257 aa3.92□□□□□ -1.78
NIFKP3-201ENST00000417799 PACRGQ96M98 296 aaPredicted RBP3.92□□□□□ -1.78
NIFKP3-201ENST00000417799 TIMM17AQ99595 171 aa3.92□□□□□ -1.78
NIFKP3-201ENST00000417799 CSDC2Q9Y534 153 aaKnown RBP3.92□□□□□ -1.78
NIFKP3-201ENST00000417799 CSMD3Q7Z407 3707 aa3.91□□□□□ -1.78
NIFKP3-201ENST00000417799 IGLV4-60A0A075B6I1 120 aa3.91□□□□□ -1.78
NIFKP3-201ENST00000417799 ATP5LO75964 103 aa3.91□□□□□ -1.78
NIFKP3-201ENST00000417799 IGHV3-30P01768 117 aa3.91□□□□□ -1.78
NIFKP3-201ENST00000417799 IGHV3-33P01772 117 aa3.91□□□□□ -1.78
NIFKP3-201ENST00000417799 DNAH10OSP0CZ25 163 aa3.91□□□□□ -1.78
NIFKP3-201ENST00000417799 IGHV3-30-3P0DP02 117 aa3.91□□□□□ -1.78
NIFKP3-201ENST00000417799 IGHV3-30-5P0DP03 117 aa3.91□□□□□ -1.78
NIFKP3-201ENST00000417799 MRPS36P82909 103 aaKnown RBP3.91□□□□□ -1.78
NIFKP3-201ENST00000417799 MPV17L2Q567V2 206 aa3.91□□□□□ -1.78
NIFKP3-201ENST00000417799 LINC01556Q5JQF7 62 aa3.91□□□□□ -1.78
NIFKP3-201ENST00000417799 LGALS9CQ6DKI2 356 aa3.91□□□□□ -1.78
NIFKP3-201ENST00000417799 LINC00173Q6ZV60 143 aa3.91□□□□□ -1.78
NIFKP3-201ENST00000417799 ZNF664Q8N3J9 261 aa3.91□□□□□ -1.78
NIFKP3-201ENST00000417799 Q8N976 141 aa3.91□□□□□ -1.78
NIFKP3-201ENST00000417799 FAM104AQ969W3 186 aa3.91□□□□□ -1.78
NIFKP3-201ENST00000417799 IFI27L1Q96BM0 104 aa3.91□□□□□ -1.78
NIFKP3-201ENST00000417799 HIST1H2BLQ99880 126 aa3.91□□□□□ -1.78
NIFKP3-201ENST00000417799 CDC42SE2Q9NRR3 84 aa3.91□□□□□ -1.78
NIFKP3-201ENST00000417799 HSPB8Q9UJY1 196 aa3.91□□□□□ -1.78
NIFKP3-201ENST00000417799 DYNC2H1Q8NCM8 4307 aaKnown RBP3.91□□□□□ -1.78
NIFKP3-201ENST00000417799 Q6ZN92 141 aa3.9□□□□□ -1.79
NIFKP3-201ENST00000417799 Q6ZUT4 128 aa3.9□□□□□ -1.79
NIFKP3-201ENST00000417799 TYMSOSQ8TAI1 123 aa3.9□□□□□ -1.79
NIFKP3-201ENST00000417799 AMELXQ99217 191 aa3.9□□□□□ -1.79
NIFKP3-201ENST00000417799 VCX2Q9H322 139 aa3.9□□□□□ -1.79
NIFKP3-201ENST00000417799 K7EP13 123 aa3.89□□□□□ -1.79
NIFKP3-201ENST00000417799 ANGP03950 147 aaKnown RBP3.89□□□□□ -1.79
NIFKP3-201ENST00000417799 PMVKQ15126 192 aa3.89□□□□□ -1.79
NIFKP3-201ENST00000417799 Q1RN00 199 aa3.89□□□□□ -1.79
NIFKP3-201ENST00000417799 RNASE13Q5GAN3 156 aaKnown RBP3.89□□□□□ -1.79
NIFKP3-201ENST00000417799 TEX43Q6ZNM6 134 aa3.89□□□□□ -1.79
NIFKP3-201ENST00000417799 LINC00269Q8N2A0 174 aa3.89□□□□□ -1.79
NIFKP3-201ENST00000417799 C10orf126Q8N4M7 172 aa3.89□□□□□ -1.79
NIFKP3-201ENST00000417799 BAALCQ8WXS3 180 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms