RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 Q6ZTC4 211 aa7.41□□□□□ -1.22
SMPD4P1-201ENST00000416717 SIGMAR1Q99720 223 aa7.41□□□□□ -1.22
SMPD4P1-201ENST00000416717 CDKN2A-AS1Q9UH64 79 aa7.41□□□□□ -1.22
SMPD4P1-201ENST00000416717 LGALS3P17931 250 aaKnown RBP7.41□□□□□ -1.22
SMPD4P1-201ENST00000416717 GCSHP23434 173 aa7.41□□□□□ -1.22
SMPD4P1-201ENST00000416717 HSD52Q0P140 79 aa7.41□□□□□ -1.22
SMPD4P1-201ENST00000416717 LINC00242Q5T6M2 205 aa7.41□□□□□ -1.22
SMPD4P1-201ENST00000416717 A6NDN8 102 aa7.4□□□□□ -1.22
SMPD4P1-201ENST00000416717 NANOS2P60321 138 aaKnown RBP7.4□□□□□ -1.22
SMPD4P1-201ENST00000416717 RPL24P83731 157 aaKnown RBP7.4□□□□□ -1.22
SMPD4P1-201ENST00000416717 RAB37Q96AX2 223 aa7.4□□□□□ -1.22
SMPD4P1-201ENST00000416717 F8WDY8 70 aa7.4□□□□□ -1.23
SMPD4P1-201ENST00000416717 H7C423 109 aa7.4□□□□□ -1.23
SMPD4P1-201ENST00000416717 LEPROTO15243 131 aa7.4□□□□□ -1.23
SMPD4P1-201ENST00000416717 CLPSL2Q6UWE3 100 aa7.4□□□□□ -1.23
SMPD4P1-201ENST00000416717 HIGD1BQ9P298 99 aa7.4□□□□□ -1.23
SMPD4P1-201ENST00000416717 IGHV3-30-3P0DP02 117 aa7.39□□□□□ -1.23
SMPD4P1-201ENST00000416717 Q8N3U1 123 aa7.39□□□□□ -1.23
SMPD4P1-201ENST00000416717 HIST1H4GQ99525 98 aa7.39□□□□□ -1.23
SMPD4P1-201ENST00000416717 SPCS1Q9Y6A9 102 aa7.39□□□□□ -1.23
SMPD4P1-201ENST00000416717 TEX48A0A1B0GUV7 120 aa7.39□□□□□ -1.23
SMPD4P1-201ENST00000416717 MRPL23Q16540 153 aaKnown RBP7.39□□□□□ -1.23
SMPD4P1-201ENST00000416717 ICOSQ9Y6W8 199 aa7.39□□□□□ -1.23
SMPD4P1-201ENST00000416717 A0A1W2PPM0 123 aa7.38□□□□□ -1.23
SMPD4P1-201ENST00000416717 FXYD2P54710 66 aa7.38□□□□□ -1.23
SMPD4P1-201ENST00000416717 TIRAPP58753 221 aa7.38□□□□□ -1.23
SMPD4P1-201ENST00000416717 HERVK_113P63121 156 aa7.38□□□□□ -1.23
SMPD4P1-201ENST00000416717 C11orf45Q8TAV5 145 aa7.38□□□□□ -1.23
SMPD4P1-201ENST00000416717 C11orf68Q9H3H3 251 aaKnown RBP7.38□□□□□ -1.23
SMPD4P1-201ENST00000416717 IGHV1-58A0A0C4DH39 117 aa7.37□□□□□ -1.23
SMPD4P1-201ENST00000416717 CKS1BP61024 79 aa7.36□□□□□ -1.23
SMPD4P1-201ENST00000416717 CEND1Q8N111 149 aa7.36□□□□□ -1.23
SMPD4P1-201ENST00000416717 SPATA25Q9BR10 227 aa7.36□□□□□ -1.23
SMPD4P1-201ENST00000416717 GAGE12HA6NDE8 117 aa7.36□□□□□ -1.23
SMPD4P1-201ENST00000416717 SRSF9Q13242 221 aaKnown RBP eCLIP7.36□□□□□ -1.23
SMPD4P1-201ENST00000416717 KPRPQ5T749 579 aaPredicted RBP7.36□□□□□ -1.23
SMPD4P1-201ENST00000416717 IGLV5-45A0A087WSX0 123 aa7.35□□□□□ -1.23
SMPD4P1-201ENST00000416717 FABP2P12104 132 aa7.35□□□□□ -1.23
SMPD4P1-201ENST00000416717 HUWE1Q7Z6Z7 4374 aaKnown RBP7.35□□□□□ -1.23
SMPD4P1-201ENST00000416717 K7ERJ3 54 aa7.35□□□□□ -1.23
SMPD4P1-201ENST00000416717 C10orf126Q8N4M7 172 aa7.35□□□□□ -1.23
SMPD4P1-201ENST00000416717 TM2D3Q9BRN9 247 aa7.35□□□□□ -1.23
SMPD4P1-201ENST00000416717 NHP2Q9NX24 153 aaKnown RBP7.35□□□□□ -1.23
SMPD4P1-201ENST00000416717 NDUFA12Q9UI09 145 aa7.35□□□□□ -1.23
SMPD4P1-201ENST00000416717 DEFB131BA0A096LNP1 70 aa7.34□□□□□ -1.23
SMPD4P1-201ENST00000416717 SMIM1B2RUZ4 78 aa7.34□□□□□ -1.23
SMPD4P1-201ENST00000416717 ANGP03950 147 aaKnown RBP7.34□□□□□ -1.23
SMPD4P1-201ENST00000416717 FAM19A3Q7Z5A8 133 aa7.34□□□□□ -1.23
SMPD4P1-201ENST00000416717 LINC00269Q8N2A0 174 aa7.34□□□□□ -1.23
SMPD4P1-201ENST00000416717 LINC00959A0A1B0GUT2 108 aa7.34□□□□□ -1.24
SMPD4P1-201ENST00000416717 XCL1P47992 114 aa7.34□□□□□ -1.24
SMPD4P1-201ENST00000416717 LYPD5Q6UWN5 251 aa7.34□□□□□ -1.24
SMPD4P1-201ENST00000416717 A0A1B0GUV1 79 aa7.33□□□□□ -1.24
SMPD4P1-201ENST00000416717 LELP1Q5T871 98 aa7.33□□□□□ -1.24
SMPD4P1-201ENST00000416717 C5orf38Q86SI9 138 aa7.33□□□□□ -1.24
SMPD4P1-201ENST00000416717 IGLV10-54A0A075B6I4 117 aa7.32□□□□□ -1.24
SMPD4P1-201ENST00000416717 A0A0J9YXY3 114 aa7.32□□□□□ -1.24
SMPD4P1-201ENST00000416717 TAL2Q16559 108 aa7.32□□□□□ -1.24
SMPD4P1-201ENST00000416717 C5orf47Q569G3 176 aa7.32□□□□□ -1.24
SMPD4P1-201ENST00000416717 ZNF625Q96I27 306 aaPredicted RBP7.32□□□□□ -1.24
SMPD4P1-201ENST00000416717 TM2D2Q9BX73 214 aa7.32□□□□□ -1.24
SMPD4P1-201ENST00000416717 COL7A1Q02388 2944 aa7.32□□□□□ -1.24
SMPD4P1-201ENST00000416717 SMIM13P0DJ93 91 aa7.32□□□□□ -1.24
SMPD4P1-201ENST00000416717 SH2D6Q7Z4S9 175 aa7.32□□□□□ -1.24
SMPD4P1-201ENST00000416717 MTURNQ8N3F0 131 aa7.32□□□□□ -1.24
SMPD4P1-201ENST00000416717 TOMM7Q9P0U1 55 aa7.32□□□□□ -1.24
SMPD4P1-201ENST00000416717 IGHV3-30P01768 117 aa7.31□□□□□ -1.24
SMPD4P1-201ENST00000416717 IGHV3-33P01772 117 aa7.31□□□□□ -1.24
SMPD4P1-201ENST00000416717 IGHV3-30-5P0DP03 117 aa7.31□□□□□ -1.24
SMPD4P1-201ENST00000416717 ZFAND6Q6FIF0 208 aa7.31□□□□□ -1.24
SMPD4P1-201ENST00000416717 IGLV5-39A0A0G2JS06 123 aa7.31□□□□□ -1.24
SMPD4P1-201ENST00000416717 A0A0U1RRA0 63 aa7.31□□□□□ -1.24
SMPD4P1-201ENST00000416717 NPC2P61916 151 aa7.31□□□□□ -1.24
SMPD4P1-201ENST00000416717 WFDC2Q14508 124 aa7.31□□□□□ -1.24
SMPD4P1-201ENST00000416717 SS18Q15532 418 aa7.31□□□□□ -1.24
SMPD4P1-201ENST00000416717 Q9H8V8 135 aa7.31□□□□□ -1.24
SMPD4P1-201ENST00000416717 IGHV3OR16-9A0A0B4J2B5 98 aa7.3□□□□□ -1.24
SMPD4P1-201ENST00000416717 REG3AQ06141 175 aa7.3□□□□□ -1.24
SMPD4P1-201ENST00000416717 WFDC10BQ8IUB3 73 aa7.3□□□□□ -1.24
SMPD4P1-201ENST00000416717 SPANXB1Q9NS25 103 aaPredicted RBP7.3□□□□□ -1.24
SMPD4P1-201ENST00000416717 KLK12Q9UKR0 248 aa7.3□□□□□ -1.24
SMPD4P1-201ENST00000416717 ADAMTSL4-AS1Q5T5F5 129 aa7.3□□□□□ -1.24
SMPD4P1-201ENST00000416717 DAND5Q8N907 189 aa7.3□□□□□ -1.24
SMPD4P1-201ENST00000416717 J3QR89 54 aa7.29□□□□□ -1.24
SMPD4P1-201ENST00000416717 PRSS2P07478 247 aa7.29□□□□□ -1.24
SMPD4P1-201ENST00000416717 ESRGQ1W209 222 aa7.29□□□□□ -1.24
SMPD4P1-201ENST00000416717 H3BNG1 76 aa7.29□□□□□ -1.24
SMPD4P1-201ENST00000416717 APOMO95445 188 aa7.29□□□□□ -1.24
SMPD4P1-201ENST00000416717 TSPAN13O95857 204 aa7.29□□□□□ -1.24
SMPD4P1-201ENST00000416717 NDUFA1O15239 70 aa7.28□□□□□ -1.24
SMPD4P1-201ENST00000416717 MUSTN1Q8IVN3 82 aa7.28□□□□□ -1.24
SMPD4P1-201ENST00000416717 LITAFQ99732 161 aa7.28□□□□□ -1.24
SMPD4P1-201ENST00000416717 A0A087WZ39 114 aa7.27□□□□□ -1.24
SMPD4P1-201ENST00000416717 F8W1H4 67 aa7.27□□□□□ -1.24
SMPD4P1-201ENST00000416717 COX7B2Q8TF08 81 aa7.27□□□□□ -1.24
SMPD4P1-201ENST00000416717 CHCHD10Q8WYQ3 142 aaPredicted RBP7.27□□□□□ -1.24
SMPD4P1-201ENST00000416717 STAB2Q8WWQ8 2551 aa7.27□□□□□ -1.25
SMPD4P1-201ENST00000416717 TRAV10A0A0B4J240 114 aa7.27□□□□□ -1.25
SMPD4P1-201ENST00000416717 M0QXV9 152 aa7.27□□□□□ -1.25
SMPD4P1-201ENST00000416717 ETDBQ3ZM63 59 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms