RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 PPBPP02775 128 aa5.4□□□□□ -1.54
UPF3AP1-201ENST00000413731 FGF6P10767 208 aa5.4□□□□□ -1.54
UPF3AP1-201ENST00000413731 S100PP25815 95 aa5.4□□□□□ -1.54
UPF3AP1-201ENST00000413731 ENHOQ6UWT2 76 aa5.4□□□□□ -1.54
UPF3AP1-201ENST00000413731 ORMDL3Q8N138 153 aa5.4□□□□□ -1.54
UPF3AP1-201ENST00000413731 C20orf203Q8NBC4 194 aa5.4□□□□□ -1.54
UPF3AP1-201ENST00000413731 IMMP2LQ96T52 175 aa5.4□□□□□ -1.54
UPF3AP1-201ENST00000413731 IGLV4-60A0A075B6I1 120 aa5.39□□□□□ -1.55
UPF3AP1-201ENST00000413731 IGLV10-54A0A075B6I4 117 aa5.39□□□□□ -1.55
UPF3AP1-201ENST00000413731 A0A1B0GUV1 79 aa5.39□□□□□ -1.55
UPF3AP1-201ENST00000413731 H7C423 109 aa5.39□□□□□ -1.55
UPF3AP1-201ENST00000413731 OXTP01178 125 aa5.39□□□□□ -1.55
UPF3AP1-201ENST00000413731 NPYP01303 97 aa5.39□□□□□ -1.55
UPF3AP1-201ENST00000413731 POLR2KP53803 58 aaKnown RBP5.39□□□□□ -1.55
UPF3AP1-201ENST00000413731 MAJINQ3KP22 176 aa5.39□□□□□ -1.55
UPF3AP1-201ENST00000413731 OR5A1Q8NGJ0 315 aa5.39□□□□□ -1.55
UPF3AP1-201ENST00000413731 BAALCQ8WXS3 180 aa5.39□□□□□ -1.55
UPF3AP1-201ENST00000413731 TMEM101Q96IK0 257 aa5.39□□□□□ -1.55
UPF3AP1-201ENST00000413731 PRELID3AQ96N28 172 aa5.39□□□□□ -1.55
UPF3AP1-201ENST00000413731 C20orf78Q9BR46 151 aa5.39□□□□□ -1.55
UPF3AP1-201ENST00000413731 SMIM2Q9BVW6 85 aa5.39□□□□□ -1.55
UPF3AP1-201ENST00000413731 TRAV9-1A0A075B6T8 112 aa5.38□□□□□ -1.55
UPF3AP1-201ENST00000413731 A0A0U1RRA0 63 aa5.38□□□□□ -1.55
UPF3AP1-201ENST00000413731 PHOX2AO14813 284 aa5.38□□□□□ -1.55
UPF3AP1-201ENST00000413731 ZNF25P17030 456 aaPredicted RBP5.38□□□□□ -1.55
UPF3AP1-201ENST00000413731 TMEM136Q6ZRR5 245 aa5.38□□□□□ -1.55
UPF3AP1-201ENST00000413731 PRR34Q9NV39 138 aa5.38□□□□□ -1.55
UPF3AP1-201ENST00000413731 TRBV24-1A0A075B6N3 115 aa5.37□□□□□ -1.55
UPF3AP1-201ENST00000413731 TGIF2-C20orf24A0A0A6YYL0 155 aa5.37□□□□□ -1.55
UPF3AP1-201ENST00000413731 TCAPO15273 167 aa5.37□□□□□ -1.55
UPF3AP1-201ENST00000413731 ESDP10768 282 aa5.37□□□□□ -1.55
UPF3AP1-201ENST00000413731 HERV-K104P63124 156 aa5.37□□□□□ -1.55
UPF3AP1-201ENST00000413731 SMAGPQ0VAQ4 97 aa5.37□□□□□ -1.55
UPF3AP1-201ENST00000413731 C14orf177Q52M58 125 aa5.37□□□□□ -1.55
UPF3AP1-201ENST00000413731 MAP1LC3AQ9H492 121 aa5.37□□□□□ -1.55
UPF3AP1-201ENST00000413731 LAMTOR2Q9Y2Q5 125 aa5.37□□□□□ -1.55
UPF3AP1-201ENST00000413731 TRAV8-4A0A0B4J246 113 aa5.36□□□□□ -1.55
UPF3AP1-201ENST00000413731 KRTAP4-8A0A0G2JLE6 195 aa5.36□□□□□ -1.55
UPF3AP1-201ENST00000413731 RAB5AP20339 215 aa5.36□□□□□ -1.55
UPF3AP1-201ENST00000413731 HNRNPA3P51991 378 aaKnown RBP5.36□□□□□ -1.55
UPF3AP1-201ENST00000413731 RPL32P62910 135 aaKnown RBP5.36□□□□□ -1.55
UPF3AP1-201ENST00000413731 RPL24P83731 157 aaKnown RBP5.36□□□□□ -1.55
UPF3AP1-201ENST00000413731 CBLN2Q8IUK8 224 aa5.36□□□□□ -1.55
UPF3AP1-201ENST00000413731 CIRBP-AS1Q8TBR5 109 aa5.36□□□□□ -1.55
UPF3AP1-201ENST00000413731 CHAC1Q9BUX1 264 aa5.36□□□□□ -1.55
UPF3AP1-201ENST00000413731 LOC389332A0A1B0GUA5 103 aa5.35□□□□□ -1.55
UPF3AP1-201ENST00000413731 MRPL52Q86TS9 123 aaKnown RBP5.35□□□□□ -1.55
UPF3AP1-201ENST00000413731 RNF213Q63HN8 5207 aa5.34□□□□□ -1.55
UPF3AP1-201ENST00000413731 XCL1P47992 114 aa5.34□□□□□ -1.55
UPF3AP1-201ENST00000413731 KIAA1644Q3SXP7 199 aa5.34□□□□□ -1.55
UPF3AP1-201ENST00000413731 COX19Q49B96 90 aa5.34□□□□□ -1.55
UPF3AP1-201ENST00000413731 RNASE13Q5GAN3 156 aaKnown RBP5.34□□□□□ -1.55
UPF3AP1-201ENST00000413731 Q6ZUT4 128 aa5.34□□□□□ -1.55
UPF3AP1-201ENST00000413731 CHCHD10Q8WYQ3 142 aaPredicted RBP5.34□□□□□ -1.55
UPF3AP1-201ENST00000413731 UBE2D4Q9Y2X8 147 aa5.34□□□□□ -1.55
UPF3AP1-201ENST00000413731 MT-ND6P03923 174 aa5.33□□□□□ -1.56
UPF3AP1-201ENST00000413731 RPL37AP61513 92 aaKnown RBP5.33□□□□□ -1.56
UPF3AP1-201ENST00000413731 RPL39P62891 51 aaKnown RBP5.33□□□□□ -1.56
UPF3AP1-201ENST00000413731 SS18Q15532 418 aa5.33□□□□□ -1.56
UPF3AP1-201ENST00000413731 ZNF664Q8N3J9 261 aa5.33□□□□□ -1.56
UPF3AP1-201ENST00000413731 YPEL4Q96NS1 127 aa5.33□□□□□ -1.56
UPF3AP1-201ENST00000413731 GNB1LQ9BYB4 327 aa5.33□□□□□ -1.56
UPF3AP1-201ENST00000413731 SMCO4Q9NRQ5 59 aa5.33□□□□□ -1.56
UPF3AP1-201ENST00000413731 CDC42SE2Q9NRR3 84 aa5.33□□□□□ -1.56
UPF3AP1-201ENST00000413731 SPANXA1Q9NS26 97 aa5.33□□□□□ -1.56
UPF3AP1-201ENST00000413731 LRP2P98164 4655 aa5.33□□□□□ -1.56
UPF3AP1-201ENST00000413731 IGLV5-45A0A087WSX0 123 aa5.32□□□□□ -1.56
UPF3AP1-201ENST00000413731 LINC00959A0A1B0GUT2 108 aa5.32□□□□□ -1.56
UPF3AP1-201ENST00000413731 CCL25O15444 150 aa5.32□□□□□ -1.56
UPF3AP1-201ENST00000413731 SCO1O75880 301 aa5.32□□□□□ -1.56
UPF3AP1-201ENST00000413731 MT1HL1P0DM35 61 aa5.32□□□□□ -1.56
UPF3AP1-201ENST00000413731 IFI27P40305 119 aaPredicted RBP5.32□□□□□ -1.56
UPF3AP1-201ENST00000413731 ORMDL2Q53FV1 153 aa5.32□□□□□ -1.56
UPF3AP1-201ENST00000413731 KRTAP26-1Q6PEX3 210 aa5.32□□□□□ -1.56
UPF3AP1-201ENST00000413731 Q8N8P6 123 aa5.32□□□□□ -1.56
UPF3AP1-201ENST00000413731 TIMM21Q9BVV7 248 aa5.32□□□□□ -1.56
UPF3AP1-201ENST00000413731 NXT2Q9NPJ8 142 aaKnown RBP5.32□□□□□ -1.56
UPF3AP1-201ENST00000413731 CSDC2Q9Y534 153 aaKnown RBP5.32□□□□□ -1.56
UPF3AP1-201ENST00000413731 TNXBP22105 4242 aa5.32□□□□□ -1.56
UPF3AP1-201ENST00000413731 TRAV13-1A0A0B4J241 112 aa5.31□□□□□ -1.56
UPF3AP1-201ENST00000413731 IFITM10A6NMD0 228 aa5.31□□□□□ -1.56
UPF3AP1-201ENST00000413731 FABP9Q0Z7S8 132 aa5.31□□□□□ -1.56
UPF3AP1-201ENST00000413731 ERASQ7Z444 233 aa5.31□□□□□ -1.56
UPF3AP1-201ENST00000413731 CYSLTR1Q9Y271 337 aa5.31□□□□□ -1.56
UPF3AP1-201ENST00000413731 TRAPPC1Q9Y5R8 145 aa5.31□□□□□ -1.56
UPF3AP1-201ENST00000413731 K7EMI3 77 aa5.3□□□□□ -1.56
UPF3AP1-201ENST00000413731 PRSS1P07477 247 aa5.3□□□□□ -1.56
UPF3AP1-201ENST00000413731 HIGD2BQ4VC39 106 aa5.3□□□□□ -1.56
UPF3AP1-201ENST00000413731 C2orf66Q6UXQ4 117 aa5.3□□□□□ -1.56
UPF3AP1-201ENST00000413731 C1orf196B1AJZ1 125 aa5.29□□□□□ -1.56
UPF3AP1-201ENST00000413731 Q6ZN92 141 aa5.29□□□□□ -1.56
UPF3AP1-201ENST00000413731 FA2HQ7L5A8 372 aa5.29□□□□□ -1.56
UPF3AP1-201ENST00000413731 C15orf56Q8N910 161 aa5.29□□□□□ -1.56
UPF3AP1-201ENST00000413731 OPRPNQ99935 248 aaPredicted RBP5.29□□□□□ -1.56
UPF3AP1-201ENST00000413731 IGLV4-3A0A075B6K6 122 aa5.28□□□□□ -1.56
UPF3AP1-201ENST00000413731 GVQW2A0A096LPI5 108 aaPredicted RBP5.28□□□□□ -1.56
UPF3AP1-201ENST00000413731 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.28□□□□□ -1.56
UPF3AP1-201ENST00000413731 IGLV9-49A0A0B4J1Y8 123 aa5.28□□□□□ -1.56
UPF3AP1-201ENST00000413731 IGHV1-58A0A0C4DH39 117 aa5.28□□□□□ -1.56
UPF3AP1-201ENST00000413731 COX7A2LO14548 114 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms