RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 H7C423 109 aa5.49□□□□□ -1.53
HERPUD2-203ENST00000413517 KRTAP10-4P60372 401 aaPredicted RBP5.49□□□□□ -1.53
HERPUD2-203ENST00000413517 C9orf163Q8N9P6 203 aa5.49□□□□□ -1.53
HERPUD2-203ENST00000413517 PRSS3P2Q8NHM4 247 aa5.49□□□□□ -1.53
HERPUD2-203ENST00000413517 CIRBP-AS1Q8TBR5 109 aa5.49□□□□□ -1.53
HERPUD2-203ENST00000413517 KRTAP4-12Q9BQ66 201 aa5.49□□□□□ -1.53
HERPUD2-203ENST00000413517 CHAC1Q9BUX1 264 aa5.49□□□□□ -1.53
HERPUD2-203ENST00000413517 CARHSP1Q9Y2V2 147 aaKnown RBP5.49□□□□□ -1.53
HERPUD2-203ENST00000413517 IGLV5-39A0A0G2JS06 123 aa5.48□□□□□ -1.53
HERPUD2-203ENST00000413517 TMEM218A2RU14 115 aa5.48□□□□□ -1.53
HERPUD2-203ENST00000413517 NPYP01303 97 aa5.48□□□□□ -1.53
HERPUD2-203ENST00000413517 INAFM2P0DMQ5 153 aa5.48□□□□□ -1.53
HERPUD2-203ENST00000413517 ADCYAP1P18509 176 aa5.48□□□□□ -1.53
HERPUD2-203ENST00000413517 HBBP68871 147 aa5.48□□□□□ -1.53
HERPUD2-203ENST00000413517 MRPL52Q86TS9 123 aaKnown RBP5.48□□□□□ -1.53
HERPUD2-203ENST00000413517 CHCHD10Q8WYQ3 142 aaPredicted RBP5.48□□□□□ -1.53
HERPUD2-203ENST00000413517 FAM104AQ969W3 186 aa5.48□□□□□ -1.53
HERPUD2-203ENST00000413517 TRBV24-1A0A075B6N3 115 aa5.47□□□□□ -1.53
HERPUD2-203ENST00000413517 LINC00959A0A1B0GUT2 108 aa5.47□□□□□ -1.53
HERPUD2-203ENST00000413517 A0A1B0GW15 77 aa5.47□□□□□ -1.53
HERPUD2-203ENST00000413517 C7orf77A4D0Y5 90 aa5.47□□□□□ -1.53
HERPUD2-203ENST00000413517 D6R8Y8 96 aa5.47□□□□□ -1.53
HERPUD2-203ENST00000413517 ZNF25P17030 456 aaPredicted RBP5.47□□□□□ -1.53
HERPUD2-203ENST00000413517 CNBPP62633 177 aaKnown RBP5.47□□□□□ -1.53
HERPUD2-203ENST00000413517 RNASE13Q5GAN3 156 aaKnown RBP5.47□□□□□ -1.53
HERPUD2-203ENST00000413517 SDIM1Q6ZPB5 146 aa5.47□□□□□ -1.53
HERPUD2-203ENST00000413517 OR5A1Q8NGJ0 315 aa5.47□□□□□ -1.53
HERPUD2-203ENST00000413517 SEC11CQ9BY50 192 aa5.47□□□□□ -1.53
HERPUD2-203ENST00000413517 SMCO4Q9NRQ5 59 aa5.47□□□□□ -1.53
HERPUD2-203ENST00000413517 CDC42SE2Q9NRR3 84 aa5.47□□□□□ -1.53
HERPUD2-203ENST00000413517 MYCBP2O75592 4640 aa5.47□□□□□ -1.53
HERPUD2-203ENST00000413517 CCL25O15444 150 aa5.46□□□□□ -1.54
HERPUD2-203ENST00000413517 CKS2P33552 79 aa5.46□□□□□ -1.54
HERPUD2-203ENST00000413517 RPL39P62891 51 aaKnown RBP5.46□□□□□ -1.54
HERPUD2-203ENST00000413517 RPL32P62910 135 aaKnown RBP5.46□□□□□ -1.54
HERPUD2-203ENST00000413517 HIGD2BQ4VC39 106 aa5.46□□□□□ -1.54
HERPUD2-203ENST00000413517 C10orf91Q5T1B1 145 aa5.46□□□□□ -1.54
HERPUD2-203ENST00000413517 SMIM2Q9BVW6 85 aa5.46□□□□□ -1.54
HERPUD2-203ENST00000413517 UBE2D4Q9Y2X8 147 aa5.46□□□□□ -1.54
HERPUD2-203ENST00000413517 GVQW2A0A096LPI5 108 aaPredicted RBP5.45□□□□□ -1.54
HERPUD2-203ENST00000413517 PPP1R2P9O14990 202 aa5.45□□□□□ -1.54
HERPUD2-203ENST00000413517 PPP1R17O96001 155 aa5.45□□□□□ -1.54
HERPUD2-203ENST00000413517 CHTF8P0CG12 524 aa5.45□□□□□ -1.54
HERPUD2-203ENST00000413517 FCER1GP30273 86 aa5.45□□□□□ -1.54
HERPUD2-203ENST00000413517 XCL1P47992 114 aa5.45□□□□□ -1.54
HERPUD2-203ENST00000413517 RPL24P83731 157 aaKnown RBP5.45□□□□□ -1.54
HERPUD2-203ENST00000413517 CIRBPQ14011 172 aaKnown RBP5.45□□□□□ -1.54
HERPUD2-203ENST00000413517 LCE3BQ5TA77 95 aa5.45□□□□□ -1.54
HERPUD2-203ENST00000413517 Q6ZUT4 128 aa5.45□□□□□ -1.54
HERPUD2-203ENST00000413517 ZNF664Q8N3J9 261 aa5.45□□□□□ -1.54
HERPUD2-203ENST00000413517 LINC00526Q96FQ7 95 aa5.45□□□□□ -1.54
HERPUD2-203ENST00000413517 BTF3L4Q96K17 158 aa5.45□□□□□ -1.54
HERPUD2-203ENST00000413517 C20orf78Q9BR46 151 aa5.45□□□□□ -1.54
HERPUD2-203ENST00000413517 LINC00587B1AMM8 73 aa5.44□□□□□ -1.54
HERPUD2-203ENST00000413517 TCAPO15273 167 aa5.44□□□□□ -1.54
HERPUD2-203ENST00000413517 ATP5L2Q7Z4Y8 100 aa5.44□□□□□ -1.54
HERPUD2-203ENST00000413517 PRR26Q8N8Z3 221 aa5.44□□□□□ -1.54
HERPUD2-203ENST00000413517 TMEM101Q96IK0 257 aa5.44□□□□□ -1.54
HERPUD2-203ENST00000413517 KIR2DL4Q99706 377 aa5.44□□□□□ -1.54
HERPUD2-203ENST00000413517 OPRPNQ99935 248 aaPredicted RBP5.44□□□□□ -1.54
HERPUD2-203ENST00000413517 CSDC2Q9Y534 153 aaKnown RBP5.44□□□□□ -1.54
HERPUD2-203ENST00000413517 IGLV5-37A0A075B6J1 123 aa5.43□□□□□ -1.54
HERPUD2-203ENST00000413517 PHOX2AO14813 284 aa5.43□□□□□ -1.54
HERPUD2-203ENST00000413517 MT-ND4LP03901 98 aa5.43□□□□□ -1.54
HERPUD2-203ENST00000413517 KRTAP19-4Q3LI73 84 aa5.43□□□□□ -1.54
HERPUD2-203ENST00000413517 KRTAP19-1Q8IUB9 90 aa5.43□□□□□ -1.54
HERPUD2-203ENST00000413517 PRELID3AQ96N28 172 aa5.43□□□□□ -1.54
HERPUD2-203ENST00000413517 TIMM21Q9BVV7 248 aa5.43□□□□□ -1.54
HERPUD2-203ENST00000413517 IGHV3-64A0A075B6Q5 118 aa5.42□□□□□ -1.54
HERPUD2-203ENST00000413517 PPBPP02775 128 aa5.42□□□□□ -1.54
HERPUD2-203ENST00000413517 HNRNPA3P51991 378 aaKnown RBP5.42□□□□□ -1.54
HERPUD2-203ENST00000413517 TMEM136Q6ZRR5 245 aa5.42□□□□□ -1.54
HERPUD2-203ENST00000413517 ORMDL3Q8N138 153 aa5.42□□□□□ -1.54
HERPUD2-203ENST00000413517 A0A087WYN8 130 aa5.41□□□□□ -1.54
HERPUD2-203ENST00000413517 TRAV13-1A0A0B4J241 112 aa5.41□□□□□ -1.54
HERPUD2-203ENST00000413517 S100A2P29034 98 aa5.41□□□□□ -1.54
HERPUD2-203ENST00000413517 SEC61GP60059 68 aa5.41□□□□□ -1.54
HERPUD2-203ENST00000413517 COX6A2Q02221 97 aa5.41□□□□□ -1.54
HERPUD2-203ENST00000413517 SS18Q15532 418 aa5.41□□□□□ -1.54
HERPUD2-203ENST00000413517 SPACA4Q8TDM5 124 aa5.41□□□□□ -1.54
HERPUD2-203ENST00000413517 A0A087WZ39 114 aa5.4□□□□□ -1.54
HERPUD2-203ENST00000413517 A0A096LNI7 61 aa5.4□□□□□ -1.54
HERPUD2-203ENST00000413517 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.4□□□□□ -1.54
HERPUD2-203ENST00000413517 IGHV1-58A0A0C4DH39 117 aa5.4□□□□□ -1.54
HERPUD2-203ENST00000413517 LOC389332A0A1B0GUA5 103 aa5.4□□□□□ -1.54
HERPUD2-203ENST00000413517 C5orf38Q86SI9 138 aa5.4□□□□□ -1.54
HERPUD2-203ENST00000413517 CBLN2Q8IUK8 224 aa5.4□□□□□ -1.54
HERPUD2-203ENST00000413517 SPANXA1Q9NS26 97 aa5.4□□□□□ -1.54
HERPUD2-203ENST00000413517 PKHD1L1Q86WI1 4243 aa5.4□□□□□ -1.55
HERPUD2-203ENST00000413517 COLCA2A8K830 154 aa5.39□□□□□ -1.55
HERPUD2-203ENST00000413517 MRPS36P82909 103 aaKnown RBP5.39□□□□□ -1.55
HERPUD2-203ENST00000413517 FABP9Q0Z7S8 132 aa5.39□□□□□ -1.55
HERPUD2-203ENST00000413517 SRSF9Q13242 221 aaKnown RBP eCLIP5.39□□□□□ -1.55
HERPUD2-203ENST00000413517 RHEBQ15382 184 aa5.39□□□□□ -1.55
HERPUD2-203ENST00000413517 LINC00173Q6ZV60 143 aa5.39□□□□□ -1.55
HERPUD2-203ENST00000413517 IGLV4-69A0A075B6H9 119 aa5.38□□□□□ -1.55
HERPUD2-203ENST00000413517 IGLV4-3A0A075B6K6 122 aa5.38□□□□□ -1.55
HERPUD2-203ENST00000413517 IGLV5-45A0A087WSX0 123 aa5.38□□□□□ -1.55
HERPUD2-203ENST00000413517 IGHV3OR16-9A0A0B4J2B5 98 aa5.38□□□□□ -1.55
HERPUD2-203ENST00000413517 IGKV2-24A0A0C4DH68 120 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms