RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 KIR2DL4Q99706 377 aa4.73□□□□□ -1.65
LSM8-202ENST00000411938 TNFRSF18Q9Y5U5 241 aa4.73□□□□□ -1.65
LSM8-202ENST00000411938 LRP1Q07954 4544 aaKnown RBP4.72□□□□□ -1.65
LSM8-202ENST00000411938 IGHV1OR15-1A0A075B7D0 117 aa4.72□□□□□ -1.65
LSM8-202ENST00000411938 A0A087WWL8 130 aa4.72□□□□□ -1.65
LSM8-202ENST00000411938 TRBV27A0A0K0K1C4 114 aa4.72□□□□□ -1.65
LSM8-202ENST00000411938 SDHAF1A6NFY7 115 aa4.72□□□□□ -1.65
LSM8-202ENST00000411938 IGIPA6NJ69 53 aa4.72□□□□□ -1.65
LSM8-202ENST00000411938 VCYO14598 125 aa4.72□□□□□ -1.65
LSM8-202ENST00000411938 TSHBP01222 138 aa4.72□□□□□ -1.65
LSM8-202ENST00000411938 PRM2P04554 102 aa4.72□□□□□ -1.65
LSM8-202ENST00000411938 FOXI2Q6ZQN5 318 aa4.72□□□□□ -1.65
LSM8-202ENST00000411938 LINC00528Q8N1L1 170 aa4.72□□□□□ -1.65
LSM8-202ENST00000411938 TRAV26-1A0A087WT03 109 aa4.71□□□□□ -1.66
LSM8-202ENST00000411938 IGLV5-52A0A0A0MRZ9 124 aa4.71□□□□□ -1.66
LSM8-202ENST00000411938 A0A0J9YY99 117 aa4.71□□□□□ -1.66
LSM8-202ENST00000411938 A8MTW9 85 aa4.71□□□□□ -1.66
LSM8-202ENST00000411938 F5H697 171 aa4.71□□□□□ -1.66
LSM8-202ENST00000411938 CRYGDP07320 174 aa4.71□□□□□ -1.66
LSM8-202ENST00000411938 FAM74A4Q5TZK3 123 aa4.71□□□□□ -1.66
LSM8-202ENST00000411938 LYRM7Q5U5X0 104 aa4.71□□□□□ -1.66
LSM8-202ENST00000411938 SCGB1D4Q6XE38 83 aa4.71□□□□□ -1.66
LSM8-202ENST00000411938 NFE4Q86UQ8 179 aa4.71□□□□□ -1.66
LSM8-202ENST00000411938 PLEKHB2Q96CS7 222 aa4.71□□□□□ -1.66
LSM8-202ENST00000411938 CLUHP3Q96NS8 147 aa4.71□□□□□ -1.66
LSM8-202ENST00000411938 JPT2Q9H910 190 aa4.71□□□□□ -1.66
LSM8-202ENST00000411938 SPANXB1Q9NS25 103 aaPredicted RBP4.71□□□□□ -1.66
LSM8-202ENST00000411938 M0QY20 66 aa4.7□□□□□ -1.66
LSM8-202ENST00000411938 UBE2D1P51668 147 aa4.7□□□□□ -1.66
LSM8-202ENST00000411938 RPL39P62891 51 aaKnown RBP4.7□□□□□ -1.66
LSM8-202ENST00000411938 SPINK13Q1W4C9 94 aa4.7□□□□□ -1.66
LSM8-202ENST00000411938 ZNF876PQ49A33 203 aa4.7□□□□□ -1.66
LSM8-202ENST00000411938 AMTNQ6UX39 209 aa4.7□□□□□ -1.66
LSM8-202ENST00000411938 FAM30AQ9NZY2 134 aa4.7□□□□□ -1.66
LSM8-202ENST00000411938 LRP2P98164 4655 aa4.7□□□□□ -1.66
LSM8-202ENST00000411938 TRAV12-2A0A075B6T6 113 aa4.69□□□□□ -1.66
LSM8-202ENST00000411938 F8W1H4 67 aa4.69□□□□□ -1.66
LSM8-202ENST00000411938 LGALS3P17931 250 aaKnown RBP4.69□□□□□ -1.66
LSM8-202ENST00000411938 AZU1P20160 251 aa4.69□□□□□ -1.66
LSM8-202ENST00000411938 TSPEAR-AS2P59090 65 aa4.69□□□□□ -1.66
LSM8-202ENST00000411938 I3L3M4 83 aa4.68□□□□□ -1.66
LSM8-202ENST00000411938 J3QR89 54 aa4.68□□□□□ -1.66
LSM8-202ENST00000411938 LEPROTO15243 131 aa4.68□□□□□ -1.66
LSM8-202ENST00000411938 TSPAN13O95857 204 aa4.68□□□□□ -1.66
LSM8-202ENST00000411938 INSP01308 110 aa4.68□□□□□ -1.66
LSM8-202ENST00000411938 RPL24P83731 157 aaKnown RBP4.68□□□□□ -1.66
LSM8-202ENST00000411938 ZNF415Q09FC8 603 aa4.68□□□□□ -1.66
LSM8-202ENST00000411938 SRSF9Q13242 221 aaKnown RBP eCLIP4.68□□□□□ -1.66
LSM8-202ENST00000411938 TMEM170BQ5T4T1 132 aa4.68□□□□□ -1.66
LSM8-202ENST00000411938 C20orf203Q8NBC4 194 aa4.68□□□□□ -1.66
LSM8-202ENST00000411938 ATP6V0E2Q8NHE4 81 aa4.68□□□□□ -1.66
LSM8-202ENST00000411938 AMELXQ99217 191 aa4.68□□□□□ -1.66
LSM8-202ENST00000411938 MRPL16Q9NX20 251 aaKnown RBP4.68□□□□□ -1.66
LSM8-202ENST00000411938 PRO0461Q9UI25 63 aa4.68□□□□□ -1.66
LSM8-202ENST00000411938 IGLV4-3A0A075B6K6 122 aa4.67□□□□□ -1.66
LSM8-202ENST00000411938 TMEM223A0PJW6 202 aa4.67□□□□□ -1.66
LSM8-202ENST00000411938 PLAC8L1A1L4L8 177 aa4.67□□□□□ -1.66
LSM8-202ENST00000411938 J3QQQ9 107 aa4.67□□□□□ -1.66
LSM8-202ENST00000411938 HTN1P15515 57 aa4.67□□□□□ -1.66
LSM8-202ENST00000411938 ZNF22P17026 224 aaPredicted RBP4.67□□□□□ -1.66
LSM8-202ENST00000411938 UBE2D3P61077 147 aa4.67□□□□□ -1.66
LSM8-202ENST00000411938 UBE2D2P62837 147 aa4.67□□□□□ -1.66
LSM8-202ENST00000411938 GAGE13Q4V321 117 aa4.67□□□□□ -1.66
LSM8-202ENST00000411938 PIK3CD-AS1Q5SR53 167 aa4.67□□□□□ -1.66
LSM8-202ENST00000411938 NTN5Q8WTR8 489 aaPredicted RBP4.67□□□□□ -1.66
LSM8-202ENST00000411938 PTH2Q96A98 100 aa4.67□□□□□ -1.66
LSM8-202ENST00000411938 NOP10Q9NPE3 64 aaKnown RBP4.67□□□□□ -1.66
LSM8-202ENST00000411938 A8MWV9 139 aa4.66□□□□□ -1.66
LSM8-202ENST00000411938 TMEM238C9JI98 176 aa4.66□□□□□ -1.66
LSM8-202ENST00000411938 H3BMG7 143 aa4.66□□□□□ -1.66
LSM8-202ENST00000411938 H3BNG1 76 aa4.66□□□□□ -1.66
LSM8-202ENST00000411938 RHODO00212 210 aa4.66□□□□□ -1.66
LSM8-202ENST00000411938 IGHV3-30P01768 117 aa4.66□□□□□ -1.66
LSM8-202ENST00000411938 IGHV3-30-5P0DP03 117 aa4.66□□□□□ -1.66
LSM8-202ENST00000411938 CRYBA4P53673 196 aa4.66□□□□□ -1.66
LSM8-202ENST00000411938 SLC25A29Q8N8R3 303 aa4.66□□□□□ -1.66
LSM8-202ENST00000411938 LINC01587Q99440 93 aa4.66□□□□□ -1.66
LSM8-202ENST00000411938 LINC00467Q9BRT7 94 aa4.66□□□□□ -1.66
LSM8-202ENST00000411938 KRTAP9-2Q9BYQ4 174 aa4.66□□□□□ -1.66
LSM8-202ENST00000411938 PYGO1Q9Y3Y4 419 aa4.66□□□□□ -1.66
LSM8-202ENST00000411938 A0A0B4J2C4 111 aa4.65□□□□□ -1.67
LSM8-202ENST00000411938 M0R2P5 195 aa4.65□□□□□ -1.67
LSM8-202ENST00000411938 APOMO95445 188 aa4.65□□□□□ -1.67
LSM8-202ENST00000411938 SCGB1A1P11684 91 aa4.65□□□□□ -1.67
LSM8-202ENST00000411938 WFDC2Q14508 124 aa4.65□□□□□ -1.67
LSM8-202ENST00000411938 CFAP126Q5VTH2 177 aa4.65□□□□□ -1.67
LSM8-202ENST00000411938 C10orf126Q8N4M7 172 aa4.65□□□□□ -1.67
LSM8-202ENST00000411938 C16orf74Q96GX8 76 aa4.65□□□□□ -1.67
LSM8-202ENST00000411938 SPANXA1Q9NS26 97 aa4.65□□□□□ -1.67
LSM8-202ENST00000411938 TRBV20-1A0A075B6N2 111 aa4.64□□□□□ -1.67
LSM8-202ENST00000411938 A0A096LPF7 62 aa4.64□□□□□ -1.67
LSM8-202ENST00000411938 LOC107984156A0A0G2JMH3 177 aa4.64□□□□□ -1.67
LSM8-202ENST00000411938 A0A0J9YXV3 536 aa4.64□□□□□ -1.67
LSM8-202ENST00000411938 KRTAP9-6A0A140TA67 174 aa4.64□□□□□ -1.67
LSM8-202ENST00000411938 PSCAO43653 123 aa4.64□□□□□ -1.67
LSM8-202ENST00000411938 GAGE7O76087 117 aa4.64□□□□□ -1.67
LSM8-202ENST00000411938 GAGE12FP0CL80 117 aa4.64□□□□□ -1.67
LSM8-202ENST00000411938 GAGE12GP0CL81 117 aa4.64□□□□□ -1.67
LSM8-202ENST00000411938 GAGE12IP0CL82 117 aa4.64□□□□□ -1.67
LSM8-202ENST00000411938 ETDBQ3ZM63 59 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms