RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 ZNF73O43830 326 aaPredicted RBP13.41□□□□□ -0.26
HCG11-201ENST00000411553 SMIM11BQ8TCY0 68 aa13.4□□□□□ -0.26
HCG11-201ENST00000411553 Q8IZM0 81 aa13.39□□□□□ -0.27
HCG11-201ENST00000411553 HIVEP3Q5T1R4 2406 aa13.39□□□□□ -0.27
HCG11-201ENST00000411553 MRPS12O15235 138 aaKnown RBP13.39□□□□□ -0.27
HCG11-201ENST00000411553 MUC7Q8TAX7 377 aa13.39□□□□□ -0.27
HCG11-201ENST00000411553 AVPP01185 164 aa13.38□□□□□ -0.27
HCG11-201ENST00000411553 CDC42SE2Q9NRR3 84 aa13.37□□□□□ -0.27
HCG11-201ENST00000411553 PCDH15Q96QU1 1955 aa13.37□□□□□ -0.27
HCG11-201ENST00000411553 CDSNQ15517 529 aa13.37□□□□□ -0.27
HCG11-201ENST00000411553 CYSRT1A8MQ03 144 aa13.37□□□□□ -0.27
HCG11-201ENST00000411553 SMR3AQ99954 134 aa13.37□□□□□ -0.27
HCG11-201ENST00000411553 NUPR2A6NF83 97 aa13.37□□□□□ -0.27
HCG11-201ENST00000411553 FAM19A3Q7Z5A8 133 aa13.37□□□□□ -0.27
HCG11-201ENST00000411553 COL4A4P53420 1690 aaPredicted RBP13.37□□□□□ -0.27
HCG11-201ENST00000411553 KIAA1549Q9HCM3 1950 aa13.36□□□□□ -0.27
HCG11-201ENST00000411553 NDUFC2-KCTD14E9PQ53 114 aa13.36□□□□□ -0.27
HCG11-201ENST00000411553 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.36□□□□□ -0.27
HCG11-201ENST00000411553 LST1O00453 97 aa13.35□□□□□ -0.27
HCG11-201ENST00000411553 Q8N9L7 120 aa13.35□□□□□ -0.27
HCG11-201ENST00000411553 NUP210LQ5VU65 1888 aa13.34□□□□□ -0.27
HCG11-201ENST00000411553 NAV3Q8IVL0 2385 aa13.34□□□□□ -0.27
HCG11-201ENST00000411553 ODF3L2Q3SX64 289 aa13.34□□□□□ -0.27
HCG11-201ENST00000411553 NAV2Q8IVL1 2488 aa13.33□□□□□ -0.28
HCG11-201ENST00000411553 FAM240AA0A1B0GVK7 77 aa13.33□□□□□ -0.28
HCG11-201ENST00000411553 SERP1Q9Y6X1 66 aa13.33□□□□□ -0.28
HCG11-201ENST00000411553 V9GYY9 64 aa13.33□□□□□ -0.28
HCG11-201ENST00000411553 C10orf25Q5T742 122 aa13.32□□□□□ -0.28
HCG11-201ENST00000411553 NDUFC1O43677 76 aa13.32□□□□□ -0.28
HCG11-201ENST00000411553 M0QXV9 152 aa13.31□□□□□ -0.28
HCG11-201ENST00000411553 MRPL55Q7Z7F7 128 aaKnown RBP13.31□□□□□ -0.28
HCG11-201ENST00000411553 POM121L12Q8N7R1 296 aa13.31□□□□□ -0.28
HCG11-201ENST00000411553 GAS8-AS1O95177 125 aa13.31□□□□□ -0.28
HCG11-201ENST00000411553 RPL28P46779 137 aaKnown RBP13.31□□□□□ -0.28
HCG11-201ENST00000411553 ATP5EP56381 51 aaPredicted RBP13.31□□□□□ -0.28
HCG11-201ENST00000411553 RETNQ9HD89 108 aa13.31□□□□□ -0.28
HCG11-201ENST00000411553 KRTAP10-9P60411 292 aa13.3□□□□□ -0.28
HCG11-201ENST00000411553 CHCHD7Q9BUK0 85 aa13.3□□□□□ -0.28
HCG11-201ENST00000411553 MYO18BQ8IUG5 2567 aa13.3□□□□□ -0.28
HCG11-201ENST00000411553 EGFEM1PQ0D2K5 195 aa13.3□□□□□ -0.28
HCG11-201ENST00000411553 YPEL4Q96NS1 127 aa13.3□□□□□ -0.28
HCG11-201ENST00000411553 EDN2P20800 178 aa13.29□□□□□ -0.28
HCG11-201ENST00000411553 SNURFQ9Y675 71 aa13.29□□□□□ -0.28
HCG11-201ENST00000411553 IGLV1-51P01701 117 aa13.29□□□□□ -0.28
HCG11-201ENST00000411553 SERP2Q8N6R1 65 aa13.29□□□□□ -0.28
HCG11-201ENST00000411553 UNQ6190/PRO20217Q6UXQ8 127 aa13.29□□□□□ -0.28
HCG11-201ENST00000411553 CNFNQ9BYD5 112 aa13.29□□□□□ -0.28
HCG11-201ENST00000411553 LINC00242Q5T6M2 205 aa13.27□□□□□ -0.28
HCG11-201ENST00000411553 C2orf91Q6ZV80 131 aa13.27□□□□□ -0.28
HCG11-201ENST00000411553 IMUPQ9GZP8 106 aa13.27□□□□□ -0.28
HCG11-201ENST00000411553 PCNX3Q9H6A9 2034 aa13.27□□□□□ -0.29
HCG11-201ENST00000411553 TANC2Q9HCD6 1990 aa13.27□□□□□ -0.29
HCG11-201ENST00000411553 IGIPA6NJ69 53 aa13.26□□□□□ -0.29
HCG11-201ENST00000411553 PLXNB1O43157 2135 aa13.26□□□□□ -0.29
HCG11-201ENST00000411553 BRI3O95415 125 aa13.25□□□□□ -0.29
HCG11-201ENST00000411553 PRR4Q16378 134 aa13.25□□□□□ -0.29
HCG11-201ENST00000411553 CCDC168Q8NDH2 2452 aa13.25□□□□□ -0.29
HCG11-201ENST00000411553 C6orf223Q8N319 242 aa13.24□□□□□ -0.29
HCG11-201ENST00000411553 IGLV5-52A0A0A0MRZ9 124 aa13.24□□□□□ -0.29
HCG11-201ENST00000411553 REG3GQ6UW15 175 aa13.24□□□□□ -0.29
HCG11-201ENST00000411553 FAM30AQ9NZY2 134 aa13.24□□□□□ -0.29
HCG11-201ENST00000411553 CRIP2P52943 208 aaPredicted RBP13.23□□□□□ -0.29
HCG11-201ENST00000411553 NTM-AS1Q6ZSK4 140 aa13.22□□□□□ -0.29
HCG11-201ENST00000411553 Q6ZTC4 211 aa13.22□□□□□ -0.29
HCG11-201ENST00000411553 C9orf116Q5BN46 136 aaPredicted RBP13.22□□□□□ -0.29
HCG11-201ENST00000411553 CIRBP-AS1Q8TBR5 109 aa13.22□□□□□ -0.29
HCG11-201ENST00000411553 C16orf95Q9H693 158 aa13.22□□□□□ -0.29
HCG11-201ENST00000411553 TRBV10-3A0A0K0K1G6 114 aa13.21□□□□□ -0.29
HCG11-201ENST00000411553 SMIM1B2RUZ4 78 aa13.21□□□□□ -0.29
HCG11-201ENST00000411553 PRRC2AP48634 2157 aaKnown RBP13.2□□□□□ -0.3
HCG11-201ENST00000411553 CEP192Q8TEP8 1941 aa13.2□□□□□ -0.3
HCG11-201ENST00000411553 FHL2Q14192 279 aa13.2□□□□□ -0.3
HCG11-201ENST00000411553 Q6ZVQ6 151 aa13.2□□□□□ -0.3
HCG11-201ENST00000411553 A6NED7 52 aa13.2□□□□□ -0.3
HCG11-201ENST00000411553 C1orf137Q5JT78 98 aa13.19□□□□□ -0.3
HCG11-201ENST00000411553 Q6JHZ5 121 aa13.19□□□□□ -0.3
HCG11-201ENST00000411553 IGLV4-60A0A075B6I1 120 aa13.19□□□□□ -0.3
HCG11-201ENST00000411553 ABCA2Q9BZC7 2435 aa13.18□□□□□ -0.3
HCG11-201ENST00000411553 ESRGQ1W209 222 aa13.18□□□□□ -0.3
HCG11-201ENST00000411553 A0A0U1RQV1 116 aa13.17□□□□□ -0.3
HCG11-201ENST00000411553 COX6A2Q02221 97 aa13.17□□□□□ -0.3
HCG11-201ENST00000411553 Q8N814 137 aa13.17□□□□□ -0.3
HCG11-201ENST00000411553 COX7CP15954 63 aa13.15□□□□□ -0.3
HCG11-201ENST00000411553 CELA1Q9UNI1 258 aa13.15□□□□□ -0.3
HCG11-201ENST00000411553 LINC00694P0DN24 101 aa13.15□□□□□ -0.3
HCG11-201ENST00000411553 HCFC1P51610 2035 aa13.14□□□□□ -0.31
HCG11-201ENST00000411553 LINC01556Q5JQF7 62 aa13.13□□□□□ -0.31
HCG11-201ENST00000411553 ZNF580Q9UK33 172 aa13.13□□□□□ -0.31
HCG11-201ENST00000411553 F8WDY8 70 aa13.12□□□□□ -0.31
HCG11-201ENST00000411553 PRR3P79522 188 aaKnown RBP13.12□□□□□ -0.31
HCG11-201ENST00000411553 C1orf134Q5TEV5 83 aa13.12□□□□□ -0.31
HCG11-201ENST00000411553 MUC22E2RYF6 1773 aaPredicted RBP13.12□□□□□ -0.31
HCG11-201ENST00000411553 IGHV6-1A0A0B4J1U7 121 aa13.12□□□□□ -0.31
HCG11-201ENST00000411553 CSDC2Q9Y534 153 aaKnown RBP13.12□□□□□ -0.31
HCG11-201ENST00000411553 FSHBP01225 129 aa13.12□□□□□ -0.31
HCG11-201ENST00000411553 C2CD3Q4AC94 2353 aa13.12□□□□□ -0.31
HCG11-201ENST00000411553 C10orf142B7Z368 130 aa13.11□□□□□ -0.31
HCG11-201ENST00000411553 NCOR2Q9Y618 2525 aa13.11□□□□□ -0.31
HCG11-201ENST00000411553 DOPEY1Q5JWR5 2465 aa13.11□□□□□ -0.31
HCG11-201ENST00000411553 A0A1W2PPR1 153 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms