RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 C5orf38Q86SI9 138 aa12.84□□□□□ -0.35
PDLIM2-207ENST00000409417 SCGB3A1Q96QR1 104 aa12.84□□□□□ -0.35
PDLIM2-207ENST00000409417 LINC00614P0C842 121 aa12.83□□□□□ -0.36
PDLIM2-207ENST00000409417 UBE2D1P51668 147 aa12.82□□□□□ -0.36
PDLIM2-207ENST00000409417 LINC00242Q5T6M2 205 aa12.82□□□□□ -0.36
PDLIM2-207ENST00000409417 URB1-AS1Q96HZ7 61 aa12.82□□□□□ -0.36
PDLIM2-207ENST00000409417 RAB5BP61020 215 aa12.81□□□□□ -0.36
PDLIM2-207ENST00000409417 ZC2HC1BQ5TFG8 222 aa12.81□□□□□ -0.36
PDLIM2-207ENST00000409417 ZNF561-AS1K7EIQ3 104 aa12.8□□□□□ -0.36
PDLIM2-207ENST00000409417 SDIM1Q6ZPB5 146 aa12.8□□□□□ -0.36
PDLIM2-207ENST00000409417 COLCA2A8K830 154 aa12.79□□□□□ -0.36
PDLIM2-207ENST00000409417 APOMO95445 188 aa12.79□□□□□ -0.36
PDLIM2-207ENST00000409417 TRGC2P03986 189 aa12.78□□□□□ -0.36
PDLIM2-207ENST00000409417 LINC00526Q96FQ7 95 aa12.78□□□□□ -0.36
PDLIM2-207ENST00000409417 DNAH8Q96JB1 4490 aa12.78□□□□□ -0.36
PDLIM2-207ENST00000409417 IGHV3-64A0A075B6Q5 118 aa12.78□□□□□ -0.36
PDLIM2-207ENST00000409417 HAMPP81172 84 aa12.78□□□□□ -0.36
PDLIM2-207ENST00000409417 COX6A2Q02221 97 aa12.78□□□□□ -0.36
PDLIM2-207ENST00000409417 Q8N1X5 172 aa12.78□□□□□ -0.36
PDLIM2-207ENST00000409417 A0A087WZ39 114 aa12.77□□□□□ -0.37
PDLIM2-207ENST00000409417 A0A096LNJ9 63 aa12.77□□□□□ -0.37
PDLIM2-207ENST00000409417 FAM19A3Q7Z5A8 133 aa12.77□□□□□ -0.37
PDLIM2-207ENST00000409417 KRTAP17-1Q9BYP8 105 aa12.77□□□□□ -0.37
PDLIM2-207ENST00000409417 HBDP02042 147 aa12.76□□□□□ -0.37
PDLIM2-207ENST00000409417 SEC11AP67812 179 aa12.76□□□□□ -0.37
PDLIM2-207ENST00000409417 OR10D4PQ8NGN7 298 aa12.76□□□□□ -0.37
PDLIM2-207ENST00000409417 CHAC1Q9BUX1 264 aa12.76□□□□□ -0.37
PDLIM2-207ENST00000409417 IGLV4-69A0A075B6H9 119 aa12.75□□□□□ -0.37
PDLIM2-207ENST00000409417 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.74□□□□□ -0.37
PDLIM2-207ENST00000409417 SYCNQ0VAF6 134 aa12.74□□□□□ -0.37
PDLIM2-207ENST00000409417 PMCHL1Q16048 86 aa12.74□□□□□ -0.37
PDLIM2-207ENST00000409417 CHCHD1Q96BP2 118 aaKnown RBP12.74□□□□□ -0.37
PDLIM2-207ENST00000409417 C2orf48Q96LS8 159 aa12.74□□□□□ -0.37
PDLIM2-207ENST00000409417 CST9LQ9H4G1 147 aa12.74□□□□□ -0.37
PDLIM2-207ENST00000409417 SCO1O75880 301 aa12.73□□□□□ -0.37
PDLIM2-207ENST00000409417 SPAG11BQ08648 103 aa12.73□□□□□ -0.37
PDLIM2-207ENST00000409417 SCXQ7RTU7 201 aa12.73□□□□□ -0.37
PDLIM2-207ENST00000409417 ORAOV1Q8WV07 137 aa12.73□□□□□ -0.37
PDLIM2-207ENST00000409417 CARD19Q96LW7 228 aa12.73□□□□□ -0.37
PDLIM2-207ENST00000409417 HERVK_113P63121 156 aa12.72□□□□□ -0.37
PDLIM2-207ENST00000409417 LINC01561Q8N1V8 128 aa12.72□□□□□ -0.37
PDLIM2-207ENST00000409417 PMVKQ15126 192 aa12.72□□□□□ -0.37
PDLIM2-207ENST00000409417 PDZD11Q5EBL8 140 aa12.72□□□□□ -0.37
PDLIM2-207ENST00000409417 BAGE3Q86Y29 109 aa12.72□□□□□ -0.37
PDLIM2-207ENST00000409417 GEMIN7Q9H840 131 aaKnown RBP12.72□□□□□ -0.37
PDLIM2-207ENST00000409417 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.72□□□□□ -0.37
PDLIM2-207ENST00000409417 A0A0J9YXV3 536 aa12.71□□□□□ -0.38
PDLIM2-207ENST00000409417 SMR3BP02814 79 aaPredicted RBP12.71□□□□□ -0.38
PDLIM2-207ENST00000409417 CIRBP-AS1Q8TBR5 109 aa12.71□□□□□ -0.38
PDLIM2-207ENST00000409417 CAMK2N2Q96S95 79 aa12.71□□□□□ -0.38
PDLIM2-207ENST00000409417 CIRBPQ14011 172 aaKnown RBP12.7□□□□□ -0.38
PDLIM2-207ENST00000409417 FAT1Q14517 4588 aa12.7□□□□□ -0.38
PDLIM2-207ENST00000409417 F8WDY8 70 aa12.69□□□□□ -0.38
PDLIM2-207ENST00000409417 PANO1I0J062 215 aa12.69□□□□□ -0.38
PDLIM2-207ENST00000409417 ATP5LO75964 103 aa12.69□□□□□ -0.38
PDLIM2-207ENST00000409417 KRTAP4-5Q9BYR2 181 aa12.69□□□□□ -0.38
PDLIM2-207ENST00000409417 PKIGQ9Y2B9 76 aa12.69□□□□□ -0.38
PDLIM2-207ENST00000409417 TINCRA0A1B0GVN0 87 aa12.68□□□□□ -0.38
PDLIM2-207ENST00000409417 Q6ZRU5 148 aa12.68□□□□□ -0.38
PDLIM2-207ENST00000409417 CDKN2A-AS1Q9UH64 79 aa12.68□□□□□ -0.38
PDLIM2-207ENST00000409417 EPM2AB3EWF7 344 aa12.66□□□□□ -0.38
PDLIM2-207ENST00000409417 KIAA0087Q14695 138 aa12.66□□□□□ -0.38
PDLIM2-207ENST00000409417 LINC00469Q8N7U9 141 aa12.66□□□□□ -0.38
PDLIM2-207ENST00000409417 IGLV5-45A0A087WSX0 123 aa12.65□□□□□ -0.38
PDLIM2-207ENST00000409417 HSBP1O75506 76 aa12.65□□□□□ -0.38
PDLIM2-207ENST00000409417 CHTF8P0CG12 524 aa12.65□□□□□ -0.38
PDLIM2-207ENST00000409417 NDUFA6P56556 154 aa12.65□□□□□ -0.38
PDLIM2-207ENST00000409417 SPACA4Q8TDM5 124 aa12.65□□□□□ -0.38
PDLIM2-207ENST00000409417 NDUFA1O15239 70 aa12.65□□□□□ -0.38
PDLIM2-207ENST00000409417 RNF151Q2KHN1 245 aa12.65□□□□□ -0.38
PDLIM2-207ENST00000409417 DPH3Q96FX2 82 aa12.65□□□□□ -0.38
PDLIM2-207ENST00000409417 MRPL35Q9NZE8 188 aaKnown RBP12.65□□□□□ -0.38
PDLIM2-207ENST00000409417 FAM229AH3BQW9 127 aa12.64□□□□□ -0.39
PDLIM2-207ENST00000409417 Q5VSD8 79 aa12.64□□□□□ -0.39
PDLIM2-207ENST00000409417 PACRGQ96M98 296 aaPredicted RBP12.64□□□□□ -0.39
PDLIM2-207ENST00000409417 PCLOQ9Y6V0 5065 aa12.63□□□□□ -0.39
PDLIM2-207ENST00000409417 ABCA13Q86UQ4 5058 aa12.63□□□□□ -0.39
PDLIM2-207ENST00000409417 A0A096LNI7 61 aa12.63□□□□□ -0.39
PDLIM2-207ENST00000409417 IGKV2-24A0A0C4DH68 120 aa12.63□□□□□ -0.39
PDLIM2-207ENST00000409417 SERF1AO75920 110 aa12.63□□□□□ -0.39
PDLIM2-207ENST00000409417 LINC00310P59036 64 aa12.63□□□□□ -0.39
PDLIM2-207ENST00000409417 FAM19A2Q8N3H0 131 aa12.63□□□□□ -0.39
PDLIM2-207ENST00000409417 LINC00474Q9P2X8 69 aa12.63□□□□□ -0.39
PDLIM2-207ENST00000409417 IGLC3P0DOY3 106 aa12.62□□□□□ -0.39
PDLIM2-207ENST00000409417 C10orf25Q5T742 122 aa12.62□□□□□ -0.39
PDLIM2-207ENST00000409417 UNQ6190/PRO20217Q6UXQ8 127 aa12.62□□□□□ -0.39
PDLIM2-207ENST00000409417 SRRM2Q9UQ35 2752 aaKnown RBP12.61□□□□□ -0.39
PDLIM2-207ENST00000409417 LOC107984640A0A0U1RRK4 108 aa12.61□□□□□ -0.39
PDLIM2-207ENST00000409417 PRSS2P07478 247 aa12.61□□□□□ -0.39
PDLIM2-207ENST00000409417 Q8IZM0 81 aa12.61□□□□□ -0.39
PDLIM2-207ENST00000409417 LINC00528Q8N1L1 170 aa12.61□□□□□ -0.39
PDLIM2-207ENST00000409417 A0A087WYN8 130 aa12.6□□□□□ -0.39
PDLIM2-207ENST00000409417 S100A1P23297 94 aa12.6□□□□□ -0.39
PDLIM2-207ENST00000409417 MAJINQ3KP22 176 aa12.6□□□□□ -0.39
PDLIM2-207ENST00000409417 IFI27L1Q96BM0 104 aa12.6□□□□□ -0.39
PDLIM2-207ENST00000409417 TOMM7Q9P0U1 55 aa12.6□□□□□ -0.39
PDLIM2-207ENST00000409417 SMIM1B2RUZ4 78 aa12.59□□□□□ -0.39
PDLIM2-207ENST00000409417 C6orf226Q5I0X4 101 aa12.59□□□□□ -0.39
PDLIM2-207ENST00000409417 C2orf82Q6UX34 121 aa12.59□□□□□ -0.39
PDLIM2-207ENST00000409417 PLAC8Q9NZF1 115 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms