RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 TMEM170BQ5T4T1 132 aa11.31□□□□□ -0.6
SSB-202ENST00000409333 CDKN2A-AS1Q9UH64 79 aa11.31□□□□□ -0.6
SSB-202ENST00000409333 MIAQ16674 131 aa11.31□□□□□ -0.6
SSB-202ENST00000409333 C10orf126Q8N4M7 172 aa11.31□□□□□ -0.6
SSB-202ENST00000409333 LINC00469Q8N7U9 141 aa11.31□□□□□ -0.6
SSB-202ENST00000409333 STPG4Q8N801 248 aa11.31□□□□□ -0.6
SSB-202ENST00000409333 SEC11AP67812 179 aa11.3□□□□□ -0.6
SSB-202ENST00000409333 Q9HAA7 133 aa11.3□□□□□ -0.6
SSB-202ENST00000409333 IGLV5-45A0A087WSX0 123 aa11.29□□□□□ -0.6
SSB-202ENST00000409333 TRAV9-2A0A087WT02 112 aa11.29□□□□□ -0.6
SSB-202ENST00000409333 IGHV3OR16-9A0A0B4J2B5 98 aa11.28□□□□□ -0.6
SSB-202ENST00000409333 C12orf57Q99622 126 aa11.28□□□□□ -0.6
SSB-202ENST00000409333 TRAV8-4A0A0B4J246 113 aa11.28□□□□□ -0.6
SSB-202ENST00000409333 LINC00476Q8WZB0 136 aa11.28□□□□□ -0.6
SSB-202ENST00000409333 VAMP8Q9BV40 100 aa11.28□□□□□ -0.6
SSB-202ENST00000409333 PAM16Q9Y3D7 125 aa11.28□□□□□ -0.6
SSB-202ENST00000409333 K7EP13 123 aa11.27□□□□□ -0.61
SSB-202ENST00000409333 LY6G6CO95867 125 aa11.27□□□□□ -0.61
SSB-202ENST00000409333 ANKRD39Q53RE8 183 aa11.27□□□□□ -0.61
SSB-202ENST00000409333 CD164L2Q6UWJ8 174 aa11.27□□□□□ -0.61
SSB-202ENST00000409333 LINC00518Q8N0U6 118 aa11.27□□□□□ -0.61
SSB-202ENST00000409333 NBDYA0A0U1RRE5 68 aa11.26□□□□□ -0.61
SSB-202ENST00000409333 TMEM223A0PJW6 202 aa11.26□□□□□ -0.61
SSB-202ENST00000409333 GAGE12HA6NDE8 117 aa11.26□□□□□ -0.61
SSB-202ENST00000409333 FOXI1Q12951 378 aa11.26□□□□□ -0.61
SSB-202ENST00000409333 C5orf38Q86SI9 138 aa11.26□□□□□ -0.61
SSB-202ENST00000409333 IGHV3-64A0A075B6Q5 118 aa11.26□□□□□ -0.61
SSB-202ENST00000409333 IGKV2D-24A0A075B6R9 120 aa11.26□□□□□ -0.61
SSB-202ENST00000409333 TRAV8-3A0A0A6YYJ7 113 aa11.26□□□□□ -0.61
SSB-202ENST00000409333 SPINK8P0C7L1 97 aa11.26□□□□□ -0.61
SSB-202ENST00000409333 KRTAP26-1Q6PEX3 210 aa11.26□□□□□ -0.61
SSB-202ENST00000409333 C1orf43Q9BWL3 253 aa11.26□□□□□ -0.61
SSB-202ENST00000409333 DNAH2Q9P225 4427 aa11.26□□□□□ -0.61
SSB-202ENST00000409333 HSBP1L1C9JCN9 74 aa11.25□□□□□ -0.61
SSB-202ENST00000409333 HYDINQ4G0P3 5121 aa11.24□□□□□ -0.61
SSB-202ENST00000409333 H3BRM9 83 aa11.24□□□□□ -0.61
SSB-202ENST00000409333 SPATA45Q537H7 98 aa11.24□□□□□ -0.61
SSB-202ENST00000409333 TTC32Q5I0X7 151 aa11.24□□□□□ -0.61
SSB-202ENST00000409333 SACSQ9NZJ4 4579 aa11.24□□□□□ -0.61
SSB-202ENST00000409333 A0A087WZ39 114 aa11.23□□□□□ -0.61
SSB-202ENST00000409333 IGKV2D-26A0A0A0MRZ7 120 aa11.23□□□□□ -0.61
SSB-202ENST00000409333 S100A12P80511 92 aa11.23□□□□□ -0.61
SSB-202ENST00000409333 SMIM1B2RUZ4 78 aa11.23□□□□□ -0.61
SSB-202ENST00000409333 M0R2N4 97 aa11.23□□□□□ -0.61
SSB-202ENST00000409333 COX7A2LO14548 114 aa11.22□□□□□ -0.61
SSB-202ENST00000409333 HERVK_113P61574 105 aa11.22□□□□□ -0.61
SSB-202ENST00000409333 E9PLD3 99 aa11.21□□□□□ -0.61
SSB-202ENST00000409333 IGHV1-58A0A0C4DH39 117 aa11.21□□□□□ -0.62
SSB-202ENST00000409333 NMUP48645 174 aa11.2□□□□□ -0.62
SSB-202ENST00000409333 TSPEAR-AS2P59090 65 aa11.2□□□□□ -0.62
SSB-202ENST00000409333 RMI2Q96E14 147 aa11.2□□□□□ -0.62
SSB-202ENST00000409333 IGLV5-39A0A0G2JS06 123 aa11.19□□□□□ -0.62
SSB-202ENST00000409333 Q6ZR54 194 aa11.19□□□□□ -0.62
SSB-202ENST00000409333 MALP21145 153 aa11.18□□□□□ -0.62
SSB-202ENST00000409333 MAPKAPK5-AS1Q8N8E1 139 aa11.18□□□□□ -0.62
SSB-202ENST00000409333 TTTY13Q9BZ97 58 aa11.18□□□□□ -0.62
SSB-202ENST00000409333 LEPROTO15243 131 aa11.18□□□□□ -0.62
SSB-202ENST00000409333 TP73-AS1Q9UF72 201 aa11.18□□□□□ -0.62
SSB-202ENST00000409333 PCP2Q8IVA1 136 aa11.17□□□□□ -0.62
SSB-202ENST00000409333 LINC01561Q8N1V8 128 aa11.17□□□□□ -0.62
SSB-202ENST00000409333 C14orf144Q96I85 54 aa11.16□□□□□ -0.62
SSB-202ENST00000409333 J3QQQ9 107 aa11.16□□□□□ -0.62
SSB-202ENST00000409333 ORAOV1Q8WV07 137 aa11.16□□□□□ -0.62
SSB-202ENST00000409333 PRO1933Q9H354 126 aa11.16□□□□□ -0.62
SSB-202ENST00000409333 TOMM7Q9P0U1 55 aa11.16□□□□□ -0.62
SSB-202ENST00000409333 FRAS1Q86XX4 4008 aa11.15□□□□□ -0.62
SSB-202ENST00000409333 PLEKHB2Q96CS7 222 aa11.15□□□□□ -0.62
SSB-202ENST00000409333 TM2D2Q9BX73 214 aa11.15□□□□□ -0.62
SSB-202ENST00000409333 COX11Q9Y6N1 276 aa11.15□□□□□ -0.62
SSB-202ENST00000409333 LGALS3P17931 250 aaKnown RBP11.14□□□□□ -0.63
SSB-202ENST00000409333 C15orf56Q8N910 161 aa11.14□□□□□ -0.63
SSB-202ENST00000409333 COX7B2Q8TF08 81 aa11.14□□□□□ -0.63
SSB-202ENST00000409333 APOMO95445 188 aa11.13□□□□□ -0.63
SSB-202ENST00000409333 Q6ZRN7 208 aaPredicted RBP11.13□□□□□ -0.63
SSB-202ENST00000409333 PSCAO43653 123 aa11.13□□□□□ -0.63
SSB-202ENST00000409333 COX8AP10176 69 aa11.13□□□□□ -0.63
SSB-202ENST00000409333 DNAH17Q9UFH2 4485 aa11.13□□□□□ -0.63
SSB-202ENST00000409333 LINC00526Q96FQ7 95 aa11.12□□□□□ -0.63
SSB-202ENST00000409333 LECT2O14960 151 aa11.11□□□□□ -0.63
SSB-202ENST00000409333 SPAG11BQ08648 103 aa11.11□□□□□ -0.63
SSB-202ENST00000409333 KIAA0087Q14695 138 aa11.11□□□□□ -0.63
SSB-202ENST00000409333 HIGD2BQ4VC39 106 aa11.11□□□□□ -0.63
SSB-202ENST00000409333 Q8IZM0 81 aa11.11□□□□□ -0.63
SSB-202ENST00000409333 C6orf223Q8N319 242 aa11.11□□□□□ -0.63
SSB-202ENST00000409333 ZNF815PA8K554 130 aa11.11□□□□□ -0.63
SSB-202ENST00000409333 BOD1L2Q8IYS8 172 aa11.11□□□□□ -0.63
SSB-202ENST00000409333 LCE6AA0A183 80 aa11.1□□□□□ -0.63
SSB-202ENST00000409333 USP17L23D6RBM5 183 aa11.1□□□□□ -0.63
SSB-202ENST00000409333 PRSS2P07478 247 aa11.1□□□□□ -0.63
SSB-202ENST00000409333 WFDC2Q14508 124 aa11.1□□□□□ -0.63
SSB-202ENST00000409333 NDUFA12Q9UI09 145 aa11.1□□□□□ -0.63
SSB-202ENST00000409333 C6orf226Q5I0X4 101 aa11.09□□□□□ -0.63
SSB-202ENST00000409333 MYMXA0A1B0GTQ4 84 aa11.08□□□□□ -0.64
SSB-202ENST00000409333 C1orf134Q5TEV5 83 aa11.08□□□□□ -0.64
SSB-202ENST00000409333 SLC25A34Q6PIV7 304 aa11.08□□□□□ -0.64
SSB-202ENST00000409333 C2orf82Q6UX34 121 aa11.08□□□□□ -0.64
SSB-202ENST00000409333 ZNF625Q96I27 306 aaPredicted RBP11.08□□□□□ -0.64
SSB-202ENST00000409333 KMT2CQ8NEZ4 4911 aaKnown RBP11.08□□□□□ -0.64
SSB-202ENST00000409333 GVQW2A0A096LPI5 108 aaPredicted RBP11.08□□□□□ -0.64
SSB-202ENST00000409333 NDUFA1O15239 70 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms