RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 OR10D4PQ8NGN7 298 aa4.72□□□□□ -1.65
LSM5-202ENST00000409292 BATF3Q9NR55 127 aa4.72□□□□□ -1.65
LSM5-202ENST00000409292 B5MCH6 92 aa4.71□□□□□ -1.66
LSM5-202ENST00000409292 G3V3Q6 166 aa4.71□□□□□ -1.66
LSM5-202ENST00000409292 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.71□□□□□ -1.66
LSM5-202ENST00000409292 TCAPO15273 167 aa4.71□□□□□ -1.66
LSM5-202ENST00000409292 TSHBP01222 138 aa4.71□□□□□ -1.66
LSM5-202ENST00000409292 BLOC1S1P78537 153 aa4.71□□□□□ -1.66
LSM5-202ENST00000409292 C5orf38Q86SI9 138 aa4.71□□□□□ -1.66
LSM5-202ENST00000409292 RNASE7Q9H1E1 156 aaKnown RBP4.71□□□□□ -1.66
LSM5-202ENST00000409292 MRPL35Q9NZE8 188 aaKnown RBP4.71□□□□□ -1.66
LSM5-202ENST00000409292 CSDC2Q9Y534 153 aaKnown RBP4.71□□□□□ -1.66
LSM5-202ENST00000409292 TRBV27A0A0K0K1C4 114 aa4.7□□□□□ -1.66
LSM5-202ENST00000409292 A0A1B0GUT8 65 aa4.7□□□□□ -1.66
LSM5-202ENST00000409292 PPP1R2P9O14990 202 aa4.7□□□□□ -1.66
LSM5-202ENST00000409292 CT83Q5H943 113 aa4.7□□□□□ -1.66
LSM5-202ENST00000409292 ORAOV1Q8WV07 137 aa4.7□□□□□ -1.66
LSM5-202ENST00000409292 OPRPNQ99935 248 aaPredicted RBP4.7□□□□□ -1.66
LSM5-202ENST00000409292 TMEM191AQ9H0A3 160 aa4.7□□□□□ -1.66
LSM5-202ENST00000409292 CARHSP1Q9Y2V2 147 aaKnown RBP4.7□□□□□ -1.66
LSM5-202ENST00000409292 TRBV20OR9-2A0A075B6H5 130 aa4.69□□□□□ -1.66
LSM5-202ENST00000409292 SMLR1H3BR10 107 aa4.69□□□□□ -1.66
LSM5-202ENST00000409292 POLR2KP53803 58 aaKnown RBP4.69□□□□□ -1.66
LSM5-202ENST00000409292 FAM19A5Q7Z5A7 132 aaPredicted RBP4.69□□□□□ -1.66
LSM5-202ENST00000409292 OCC1Q8TAD7 63 aa4.69□□□□□ -1.66
LSM5-202ENST00000409292 TGIF2-C20orf24A0A0A6YYL0 155 aa4.68□□□□□ -1.66
LSM5-202ENST00000409292 M0QXV9 152 aa4.68□□□□□ -1.66
LSM5-202ENST00000409292 FOXA3P55318 350 aaPredicted RBP4.68□□□□□ -1.66
LSM5-202ENST00000409292 RIGQ13278 110 aa4.68□□□□□ -1.66
LSM5-202ENST00000409292 GAGE2EQ4V326 116 aa4.68□□□□□ -1.66
LSM5-202ENST00000409292 FAM231DQ6ZW35 169 aa4.68□□□□□ -1.66
LSM5-202ENST00000409292 PACRGQ96M98 296 aaPredicted RBP4.68□□□□□ -1.66
LSM5-202ENST00000409292 TIMM21Q9BVV7 248 aa4.68□□□□□ -1.66
LSM5-202ENST00000409292 GAGE2DQ9UEU5 116 aa4.68□□□□□ -1.66
LSM5-202ENST00000409292 UBE2D4Q9Y2X8 147 aa4.68□□□□□ -1.66
LSM5-202ENST00000409292 TMEM250H0YL14 139 aa4.67□□□□□ -1.66
LSM5-202ENST00000409292 TLX1NBP0CAT3 122 aa4.67□□□□□ -1.66
LSM5-202ENST00000409292 CEBPGP53567 150 aa4.67□□□□□ -1.66
LSM5-202ENST00000409292 SUMO2P61956 95 aaKnown RBP4.67□□□□□ -1.66
LSM5-202ENST00000409292 HBBP68871 147 aa4.67□□□□□ -1.66
LSM5-202ENST00000409292 LBHQ53QV2 105 aaPredicted RBP4.67□□□□□ -1.66
LSM5-202ENST00000409292 RNASE13Q5GAN3 156 aaKnown RBP4.67□□□□□ -1.66
LSM5-202ENST00000409292 IFITM10A6NMD0 228 aa4.66□□□□□ -1.66
LSM5-202ENST00000409292 HIGD1CA8MV81 97 aa4.66□□□□□ -1.66
LSM5-202ENST00000409292 K7EN84 100 aa4.66□□□□□ -1.66
LSM5-202ENST00000409292 RAB4AP20338 218 aa4.66□□□□□ -1.66
LSM5-202ENST00000409292 Q6ZUT4 128 aa4.66□□□□□ -1.66
LSM5-202ENST00000409292 AMN1Q8IY45 258 aa4.66□□□□□ -1.66
LSM5-202ENST00000409292 SPANXA1Q9NS26 97 aa4.66□□□□□ -1.66
LSM5-202ENST00000409292 TRBV30A0A0K0K1B3 111 aa4.65□□□□□ -1.67
LSM5-202ENST00000409292 LINC00862A6NCI5 91 aa4.65□□□□□ -1.67
LSM5-202ENST00000409292 NUPR1O60356 82 aa4.65□□□□□ -1.67
LSM5-202ENST00000409292 TSPAN13O95857 204 aa4.65□□□□□ -1.67
LSM5-202ENST00000409292 PRSS2P07478 247 aa4.65□□□□□ -1.67
LSM5-202ENST00000409292 C21orf62-AS1Q17RA5 79 aa4.65□□□□□ -1.67
LSM5-202ENST00000409292 SLC51BQ86UW2 128 aa4.65□□□□□ -1.67
LSM5-202ENST00000409292 C20orf78Q9BR46 151 aa4.65□□□□□ -1.67
LSM5-202ENST00000409292 SMDT1Q9H4I9 107 aa4.65□□□□□ -1.67
LSM5-202ENST00000409292 FAM168BA1KXE4 195 aa4.64□□□□□ -1.67
LSM5-202ENST00000409292 NDUFC2-KCTD14E9PQ53 114 aa4.64□□□□□ -1.67
LSM5-202ENST00000409292 ZNF861PO60384 105 aa4.64□□□□□ -1.67
LSM5-202ENST00000409292 S100A8P05109 93 aa4.64□□□□□ -1.67
LSM5-202ENST00000409292 CRYGAP11844 174 aa4.64□□□□□ -1.67
LSM5-202ENST00000409292 RAB5AP20339 215 aa4.64□□□□□ -1.67
LSM5-202ENST00000409292 CKS2P33552 79 aa4.64□□□□□ -1.67
LSM5-202ENST00000409292 IFI27P40305 119 aaPredicted RBP4.64□□□□□ -1.67
LSM5-202ENST00000409292 RPL28P46779 137 aaKnown RBP4.64□□□□□ -1.67
LSM5-202ENST00000409292 UNQ6190/PRO20217Q6UXQ8 127 aa4.64□□□□□ -1.67
LSM5-202ENST00000409292 SMIM7Q9BQ49 75 aa4.64□□□□□ -1.67
LSM5-202ENST00000409292 TMA7Q9Y2S6 64 aaKnown RBP4.64□□□□□ -1.67
LSM5-202ENST00000409292 IGHV3OR16-9A0A0B4J2B5 98 aa4.63□□□□□ -1.67
LSM5-202ENST00000409292 A0A1B0GW15 77 aa4.63□□□□□ -1.67
LSM5-202ENST00000409292 SMKR1H3BMG3 65 aa4.63□□□□□ -1.67
LSM5-202ENST00000409292 KRTAP1-4P0C5Y4 121 aa4.63□□□□□ -1.67
LSM5-202ENST00000409292 CKS1BP61024 79 aa4.63□□□□□ -1.67
LSM5-202ENST00000409292 MRPS36P82909 103 aaKnown RBP4.63□□□□□ -1.67
LSM5-202ENST00000409292 TYMSOSQ8TAI1 123 aa4.63□□□□□ -1.67
LSM5-202ENST00000409292 C2orf88Q9BSF0 95 aa4.63□□□□□ -1.67
LSM5-202ENST00000409292 EIF5A2Q9GZV4 153 aaKnown RBP4.63□□□□□ -1.67
LSM5-202ENST00000409292 OSTCQ9NRP0 149 aa4.63□□□□□ -1.67
LSM5-202ENST00000409292 C6orf48Q9UBA6 75 aa4.63□□□□□ -1.67
LSM5-202ENST00000409292 NAT8BQ9UHF3 227 aa4.63□□□□□ -1.67
LSM5-202ENST00000409292 ZNF727A8MUV8 499 aa4.62□□□□□ -1.67
LSM5-202ENST00000409292 F8W036 122 aa4.62□□□□□ -1.67
LSM5-202ENST00000409292 RPL32P62910 135 aaKnown RBP4.62□□□□□ -1.67
LSM5-202ENST00000409292 Q6ZN92 141 aa4.62□□□□□ -1.67
LSM5-202ENST00000409292 C10orf25Q5T742 122 aa4.61□□□□□ -1.67
LSM5-202ENST00000409292 FAM104BQ5XKR9 115 aa4.61□□□□□ -1.67
LSM5-202ENST00000409292 NRACQ8N912 160 aa4.61□□□□□ -1.67
LSM5-202ENST00000409292 TRBV24-1A0A075B6N3 115 aa4.6□□□□□ -1.67
LSM5-202ENST00000409292 PPBPP02775 128 aa4.6□□□□□ -1.67
LSM5-202ENST00000409292 MRPL51Q4U2R6 128 aaKnown RBP4.6□□□□□ -1.67
LSM5-202ENST00000409292 C6orf226Q5I0X4 101 aa4.6□□□□□ -1.67
LSM5-202ENST00000409292 TEX43Q6ZNM6 134 aa4.6□□□□□ -1.67
LSM5-202ENST00000409292 LINC01551Q86U37 167 aa4.6□□□□□ -1.67
LSM5-202ENST00000409292 LINC01561Q8N1V8 128 aa4.6□□□□□ -1.67
LSM5-202ENST00000409292 SMIM2Q9BVW6 85 aa4.6□□□□□ -1.67
LSM5-202ENST00000409292 CTDSP1Q9GZU7 261 aa4.6□□□□□ -1.67
LSM5-202ENST00000409292 TOMM7Q9P0U1 55 aa4.6□□□□□ -1.67
LSM5-202ENST00000409292 TNFRSF6BO95407 300 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms