RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 PRR3P79522 188 aaKnown RBP8.12□□□□□ -1.11
SNORD88B-201ENST00000408454 ORMDL2Q53FV1 153 aa8.12□□□□□ -1.11
SNORD88B-201ENST00000408454 PRELID3AQ96N28 172 aa8.12□□□□□ -1.11
SNORD88B-201ENST00000408454 MRPL35Q9NZE8 188 aaKnown RBP8.12□□□□□ -1.11
SNORD88B-201ENST00000408454 RPL18AQ02543 176 aaKnown RBP8.11□□□□□ -1.11
SNORD88B-201ENST00000408454 GAGE2BQ13066 116 aa8.11□□□□□ -1.11
SNORD88B-201ENST00000408454 TEX43Q6ZNM6 134 aa8.11□□□□□ -1.11
SNORD88B-201ENST00000408454 Q6ZUT4 128 aa8.11□□□□□ -1.11
SNORD88B-201ENST00000408454 CYSLTR1Q9Y271 337 aa8.11□□□□□ -1.11
SNORD88B-201ENST00000408454 VPS13BQ7Z7G8 4022 aa8.11□□□□□ -1.11
SNORD88B-201ENST00000408454 A0A1B0GXF2 115 aa8.1□□□□□ -1.11
SNORD88B-201ENST00000408454 LINC01561Q8N1V8 128 aa8.1□□□□□ -1.11
SNORD88B-201ENST00000408454 ORAOV1Q8WV07 137 aa8.1□□□□□ -1.11
SNORD88B-201ENST00000408454 TMEM141Q96I45 108 aa8.1□□□□□ -1.11
SNORD88B-201ENST00000408454 PACRGQ96M98 296 aaPredicted RBP8.1□□□□□ -1.11
SNORD88B-201ENST00000408454 NXT2Q9NPJ8 142 aaKnown RBP8.1□□□□□ -1.11
SNORD88B-201ENST00000408454 FAT1Q14517 4588 aa8.09□□□□□ -1.11
SNORD88B-201ENST00000408454 GAS8-AS1O95177 125 aa8.09□□□□□ -1.11
SNORD88B-201ENST00000408454 C5orf38Q86SI9 138 aa8.09□□□□□ -1.11
SNORD88B-201ENST00000408454 MT-ND6P03923 174 aa8.08□□□□□ -1.12
SNORD88B-201ENST00000408454 PRSS2P07478 247 aa8.08□□□□□ -1.12
SNORD88B-201ENST00000408454 CTDSP1Q9GZU7 261 aa8.08□□□□□ -1.12
SNORD88B-201ENST00000408454 TRAV9-1A0A075B6T8 112 aa8.07□□□□□ -1.12
SNORD88B-201ENST00000408454 IGHV3OR16-9A0A0B4J2B5 98 aa8.07□□□□□ -1.12
SNORD88B-201ENST00000408454 TRBV30A0A0K0K1B3 111 aa8.07□□□□□ -1.12
SNORD88B-201ENST00000408454 PRSS47A8MTI9 375 aa8.07□□□□□ -1.12
SNORD88B-201ENST00000408454 NPYP01303 97 aa8.07□□□□□ -1.12
SNORD88B-201ENST00000408454 S100PP25815 95 aa8.07□□□□□ -1.12
SNORD88B-201ENST00000408454 COX19Q49B96 90 aa8.07□□□□□ -1.12
SNORD88B-201ENST00000408454 VCX2Q9H322 139 aa8.07□□□□□ -1.12
SNORD88B-201ENST00000408454 A0A087WZ39 114 aa8.06□□□□□ -1.12
SNORD88B-201ENST00000408454 TLX1NBP0CAT3 122 aa8.06□□□□□ -1.12
SNORD88B-201ENST00000408454 RNASE13Q5GAN3 156 aaKnown RBP8.06□□□□□ -1.12
SNORD88B-201ENST00000408454 UQCC3Q6UW78 93 aa8.06□□□□□ -1.12
SNORD88B-201ENST00000408454 LINC01600Q96MT4 127 aa8.06□□□□□ -1.12
SNORD88B-201ENST00000408454 C9JQL5 133 aa8.05□□□□□ -1.12
SNORD88B-201ENST00000408454 CKS1BP61024 79 aa8.05□□□□□ -1.12
SNORD88B-201ENST00000408454 RPL39P62891 51 aaKnown RBP8.05□□□□□ -1.12
SNORD88B-201ENST00000408454 Q8N8P6 123 aa8.05□□□□□ -1.12
SNORD88B-201ENST00000408454 LINC00526Q96FQ7 95 aa8.05□□□□□ -1.12
SNORD88B-201ENST00000408454 MYCBP2O75592 4640 aa8.05□□□□□ -1.12
SNORD88B-201ENST00000408454 HNRNPA3P51991 378 aaKnown RBP8.04□□□□□ -1.12
SNORD88B-201ENST00000408454 HERVK_113P63121 156 aa8.04□□□□□ -1.12
SNORD88B-201ENST00000408454 SRSF3P84103 164 aaKnown RBP8.04□□□□□ -1.12
SNORD88B-201ENST00000408454 C9orf116Q5BN46 136 aaPredicted RBP8.04□□□□□ -1.12
SNORD88B-201ENST00000408454 DIRC1Q969H9 104 aa8.04□□□□□ -1.12
SNORD88B-201ENST00000408454 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.03□□□□□ -1.12
SNORD88B-201ENST00000408454 CXCL5P42830 114 aa8.03□□□□□ -1.12
SNORD88B-201ENST00000408454 C2orf66Q6UXQ4 117 aa8.03□□□□□ -1.12
SNORD88B-201ENST00000408454 GEMIN7Q9H840 131 aaKnown RBP8.03□□□□□ -1.12
SNORD88B-201ENST00000408454 IGLV4-3A0A075B6K6 122 aa8.02□□□□□ -1.13
SNORD88B-201ENST00000408454 A0A0J9YXV3 536 aa8.02□□□□□ -1.13
SNORD88B-201ENST00000408454 A0A1B0GVG6 124 aa8.02□□□□□ -1.13
SNORD88B-201ENST00000408454 LOC389332A0A1B0GUA5 103 aa8.01□□□□□ -1.13
SNORD88B-201ENST00000408454 NDUFC2-KCTD14E9PQ53 114 aa8.01□□□□□ -1.13
SNORD88B-201ENST00000408454 ODF1Q14990 250 aa8.01□□□□□ -1.13
SNORD88B-201ENST00000408454 C6orf226Q5I0X4 101 aa8.01□□□□□ -1.13
SNORD88B-201ENST00000408454 CLLU1Q5K131 121 aa8.01□□□□□ -1.13
SNORD88B-201ENST00000408454 DNAH8Q96JB1 4490 aa8□□□□□ -1.13
SNORD88B-201ENST00000408454 UBE2BP63146 152 aa8□□□□□ -1.13
SNORD88B-201ENST00000408454 TIMM17AQ99595 171 aa8□□□□□ -1.13
SNORD88B-201ENST00000408454 UBE2D1P51668 147 aa7.99□□□□□ -1.13
SNORD88B-201ENST00000408454 LBHQ53QV2 105 aaPredicted RBP7.99□□□□□ -1.13
SNORD88B-201ENST00000408454 C1orf137Q5JT78 98 aa7.99□□□□□ -1.13
SNORD88B-201ENST00000408454 LINC00242Q5T6M2 205 aa7.99□□□□□ -1.13
SNORD88B-201ENST00000408454 Q8IZM0 81 aa7.99□□□□□ -1.13
SNORD88B-201ENST00000408454 ALKBH7Q9BT30 221 aaPredicted RBP7.99□□□□□ -1.13
SNORD88B-201ENST00000408454 HERC1Q15751 4861 aa7.98□□□□□ -1.13
SNORD88B-201ENST00000408454 OPRPNQ99935 248 aaPredicted RBP7.98□□□□□ -1.13
SNORD88B-201ENST00000408454 SMCO4Q9NRQ5 59 aa7.98□□□□□ -1.13
SNORD88B-201ENST00000408454 PSORS1C2Q9UIG4 136 aa7.98□□□□□ -1.13
SNORD88B-201ENST00000408454 MT1HL1P0DM35 61 aa7.97□□□□□ -1.13
SNORD88B-201ENST00000408454 RPL13AP40429 203 aaKnown RBP7.97□□□□□ -1.13
SNORD88B-201ENST00000408454 SRSF9Q13242 221 aaKnown RBP eCLIP7.97□□□□□ -1.13
SNORD88B-201ENST00000408454 GAGE2EQ4V326 116 aa7.97□□□□□ -1.13
SNORD88B-201ENST00000408454 ERASQ7Z444 233 aa7.97□□□□□ -1.13
SNORD88B-201ENST00000408454 FAM19A3Q7Z5A8 133 aa7.97□□□□□ -1.13
SNORD88B-201ENST00000408454 GAGE2DQ9UEU5 116 aa7.97□□□□□ -1.13
SNORD88B-201ENST00000408454 A0A1W2PNN7 141 aa7.96□□□□□ -1.14
SNORD88B-201ENST00000408454 F8VRH5 84 aa7.96□□□□□ -1.14
SNORD88B-201ENST00000408454 M0QXV9 152 aa7.96□□□□□ -1.14
SNORD88B-201ENST00000408454 UNQ6190/PRO20217Q6UXQ8 127 aa7.96□□□□□ -1.14
SNORD88B-201ENST00000408454 AMELXQ99217 191 aa7.96□□□□□ -1.14
SNORD88B-201ENST00000408454 SEC11CQ9BY50 192 aa7.96□□□□□ -1.14
SNORD88B-201ENST00000408454 GNB1LQ9BYB4 327 aa7.96□□□□□ -1.14
SNORD88B-201ENST00000408454 TOMM7Q9P0U1 55 aa7.96□□□□□ -1.14
SNORD88B-201ENST00000408454 H3BRM9 83 aa7.95□□□□□ -1.14
SNORD88B-201ENST00000408454 NUPR1O60356 82 aa7.95□□□□□ -1.14
SNORD88B-201ENST00000408454 IGLV7-43P04211 117 aa7.95□□□□□ -1.14
SNORD88B-201ENST00000408454 SFTA2Q6UW10 78 aa7.95□□□□□ -1.14
SNORD88B-201ENST00000408454 FAM19A5Q7Z5A7 132 aaPredicted RBP7.95□□□□□ -1.14
SNORD88B-201ENST00000408454 TOMM6Q96B49 74 aa7.95□□□□□ -1.14
SNORD88B-201ENST00000408454 SCGB3A1Q96QR1 104 aa7.95□□□□□ -1.14
SNORD88B-201ENST00000408454 MRPL18Q9H0U6 180 aaKnown RBP7.95□□□□□ -1.14
SNORD88B-201ENST00000408454 C6orf48Q9UBA6 75 aa7.95□□□□□ -1.14
SNORD88B-201ENST00000408454 IGIPA6NJ69 53 aa7.94□□□□□ -1.14
SNORD88B-201ENST00000408454 FA2HQ7L5A8 372 aa7.94□□□□□ -1.14
SNORD88B-201ENST00000408454 IGLV1-50A0A075B6I6 118 aa7.93□□□□□ -1.14
SNORD88B-201ENST00000408454 TMEM218A2RU14 115 aa7.93□□□□□ -1.14
SNORD88B-201ENST00000408454 RHEBQ15382 184 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms