RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 P0C879 139 aa8.94□□□□□ -0.98
SMCR8-201ENST00000406438 BBC3Q96PG8 261 aaPredicted RBP8.93□□□□□ -0.98
SMCR8-201ENST00000406438 U3KQK5 164 aa8.93□□□□□ -0.98
SMCR8-201ENST00000406438 ZNF843Q8N446 348 aa8.93□□□□□ -0.98
SMCR8-201ENST00000406438 Q8N976 141 aa8.93□□□□□ -0.98
SMCR8-201ENST00000406438 C11orf1Q9H5F2 150 aa8.93□□□□□ -0.98
SMCR8-201ENST00000406438 ZFAND3Q9H8U3 227 aa8.93□□□□□ -0.98
SMCR8-201ENST00000406438 PYGO1Q9Y3Y4 419 aa8.93□□□□□ -0.98
SMCR8-201ENST00000406438 IMUPQ9GZP8 106 aa8.93□□□□□ -0.98
SMCR8-201ENST00000406438 TRBV27A0A0K0K1C4 114 aa8.93□□□□□ -0.98
SMCR8-201ENST00000406438 PLAC8L1A1L4L8 177 aa8.93□□□□□ -0.98
SMCR8-201ENST00000406438 RPL37AP8A6NKH3 93 aa8.92□□□□□ -0.98
SMCR8-201ENST00000406438 PSMG3-AS1Q96PY0 264 aa8.92□□□□□ -0.98
SMCR8-201ENST00000406438 LY6G6DO95868 133 aa8.92□□□□□ -0.98
SMCR8-201ENST00000406438 IGLV2-8P01709 118 aa8.92□□□□□ -0.98
SMCR8-201ENST00000406438 SNURFQ9Y675 71 aa8.92□□□□□ -0.98
SMCR8-201ENST00000406438 C19orf84I3L1E1 186 aa8.92□□□□□ -0.98
SMCR8-201ENST00000406438 Q6ZSV7 163 aa8.92□□□□□ -0.98
SMCR8-201ENST00000406438 F8P00451 2351 aa8.92□□□□□ -0.98
SMCR8-201ENST00000406438 CLUHP3Q96NS8 147 aa8.91□□□□□ -0.98
SMCR8-201ENST00000406438 PROK1P58294 105 aa8.91□□□□□ -0.98
SMCR8-201ENST00000406438 WFDC13Q8IUB5 93 aa8.91□□□□□ -0.98
SMCR8-201ENST00000406438 RBX1P62877 108 aa8.91□□□□□ -0.98
SMCR8-201ENST00000406438 CRIP1P50238 77 aa8.9□□□□□ -0.98
SMCR8-201ENST00000406438 SERP2Q8N6R1 65 aa8.9□□□□□ -0.98
SMCR8-201ENST00000406438 JMJD1CQ15652 2540 aa8.9□□□□□ -0.98
SMCR8-201ENST00000406438 SMIM11BQ8TCY0 68 aa8.9□□□□□ -0.99
SMCR8-201ENST00000406438 MUC7Q8TAX7 377 aa8.89□□□□□ -0.99
SMCR8-201ENST00000406438 RNF185Q96GF1 192 aa8.89□□□□□ -0.99
SMCR8-201ENST00000406438 MRPS36P82909 103 aaKnown RBP8.89□□□□□ -0.99
SMCR8-201ENST00000406438 CIRBP-AS1Q8TBR5 109 aa8.89□□□□□ -0.99
SMCR8-201ENST00000406438 NUPR2A6NF83 97 aa8.88□□□□□ -0.99
SMCR8-201ENST00000406438 FAM30AQ9NZY2 134 aa8.88□□□□□ -0.99
SMCR8-201ENST00000406438 CENPFP49454 3210 aa8.88□□□□□ -0.99
SMCR8-201ENST00000406438 EBI3Q14213 229 aa8.88□□□□□ -0.99
SMCR8-201ENST00000406438 NRACQ8N912 160 aa8.88□□□□□ -0.99
SMCR8-201ENST00000406438 Q6ZQY7 126 aa8.88□□□□□ -0.99
SMCR8-201ENST00000406438 NCOR2Q9Y618 2525 aa8.88□□□□□ -0.99
SMCR8-201ENST00000406438 TSHBP01222 138 aa8.88□□□□□ -0.99
SMCR8-201ENST00000406438 RPL28P46779 137 aaKnown RBP8.87□□□□□ -0.99
SMCR8-201ENST00000406438 EP400Q96L91 3159 aa8.87□□□□□ -0.99
SMCR8-201ENST00000406438 NDUFA7O95182 113 aa8.87□□□□□ -0.99
SMCR8-201ENST00000406438 MAPKAPK5-AS1Q8N8E1 139 aa8.87□□□□□ -0.99
SMCR8-201ENST00000406438 LINC00959A0A1B0GUT2 108 aa8.87□□□□□ -0.99
SMCR8-201ENST00000406438 EIF4EBP1Q13541 118 aaPredicted RBP8.87□□□□□ -0.99
SMCR8-201ENST00000406438 C11orf71Q6IPW1 123 aa8.87□□□□□ -0.99
SMCR8-201ENST00000406438 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.86□□□□□ -0.99
SMCR8-201ENST00000406438 ZNF702PQ9H963 129 aa8.86□□□□□ -0.99
SMCR8-201ENST00000406438 NANOS2P60321 138 aaKnown RBP8.86□□□□□ -0.99
SMCR8-201ENST00000406438 LINC00526Q96FQ7 95 aa8.86□□□□□ -0.99
SMCR8-201ENST00000406438 ZNF73O43830 326 aaPredicted RBP8.86□□□□□ -0.99
SMCR8-201ENST00000406438 WISP2O76076 250 aa8.85□□□□□ -0.99
SMCR8-201ENST00000406438 ANKRD11Q6UB99 2663 aaPredicted RBP8.85□□□□□ -0.99
SMCR8-201ENST00000406438 Q8IZM0 81 aa8.85□□□□□ -0.99
SMCR8-201ENST00000406438 X6R8D5 127 aa8.85□□□□□ -0.99
SMCR8-201ENST00000406438 LOC100131303A0A0U1RQF7 123 aa8.85□□□□□ -0.99
SMCR8-201ENST00000406438 C22orf34Q6ZV56 151 aa8.85□□□□□ -0.99
SMCR8-201ENST00000406438 RNASE3P12724 160 aaKnown RBP8.84□□□□□ -0.99
SMCR8-201ENST00000406438 ESRGQ1W209 222 aa8.84□□□□□ -0.99
SMCR8-201ENST00000406438 TP73-AS1Q9UF72 201 aa8.84□□□□□ -0.99
SMCR8-201ENST00000406438 LST1O00453 97 aa8.84□□□□□ -0.99
SMCR8-201ENST00000406438 MRPS12O15235 138 aaKnown RBP8.84□□□□□ -0.99
SMCR8-201ENST00000406438 C10orf99Q6UWK7 81 aa8.84□□□□□ -0.99
SMCR8-201ENST00000406438 WFDC10AQ9H1F0 79 aa8.84□□□□□ -0.99
SMCR8-201ENST00000406438 RETNQ9HD89 108 aa8.83□□□□□ -1
SMCR8-201ENST00000406438 REG3GQ6UW15 175 aa8.83□□□□□ -1
SMCR8-201ENST00000406438 LINC01006Q8NI28 216 aa8.83□□□□□ -1
SMCR8-201ENST00000406438 IGLV5-52A0A0A0MRZ9 124 aa8.83□□□□□ -1
SMCR8-201ENST00000406438 MBD6Q96DN6 1003 aa8.83□□□□□ -1
SMCR8-201ENST00000406438 KLLNB2CW77 178 aa8.83□□□□□ -1
SMCR8-201ENST00000406438 M0QXV9 152 aa8.83□□□□□ -1
SMCR8-201ENST00000406438 BRWD1-AS2P59051 145 aa8.82□□□□□ -1
SMCR8-201ENST00000406438 PKD1L2Q7Z442 2459 aa8.82□□□□□ -1
SMCR8-201ENST00000406438 MRGPRG-AS1Q2M3A8 158 aa8.82□□□□□ -1
SMCR8-201ENST00000406438 A8MZ25 164 aa8.82□□□□□ -1
SMCR8-201ENST00000406438 SPTBN4Q9H254 2564 aa8.82□□□□□ -1
SMCR8-201ENST00000406438 FSHBP01225 129 aa8.82□□□□□ -1
SMCR8-201ENST00000406438 IGLV2-11P01706 119 aa8.82□□□□□ -1
SMCR8-201ENST00000406438 PRR4Q16378 134 aa8.82□□□□□ -1
SMCR8-201ENST00000406438 C1orf229Q6ZS94 237 aaPredicted RBP8.81□□□□□ -1
SMCR8-201ENST00000406438 C18orf65Q6ZTR6 163 aa8.81□□□□□ -1
SMCR8-201ENST00000406438 USP9XQ93008 2570 aaPredicted RBP8.8□□□□□ -1
SMCR8-201ENST00000406438 COX7CP15954 63 aa8.8□□□□□ -1
SMCR8-201ENST00000406438 CYSRT1A8MQ03 144 aa8.8□□□□□ -1
SMCR8-201ENST00000406438 CDC42SE2Q9NRR3 84 aa8.79□□□□□ -1
SMCR8-201ENST00000406438 TRBV7-6A0A0J9YX20 115 aa8.79□□□□□ -1
SMCR8-201ENST00000406438 ZNF295-AS1Q8N0V1 137 aa8.78□□□□□ -1
SMCR8-201ENST00000406438 Q6ZPA2 131 aa8.78□□□□□ -1
SMCR8-201ENST00000406438 BPTFQ12830 3046 aa8.78□□□□□ -1
SMCR8-201ENST00000406438 IGLV1-40P01703 118 aa8.77□□□□□ -1
SMCR8-201ENST00000406438 PRM2P04554 102 aa8.77□□□□□ -1
SMCR8-201ENST00000406438 TRAV7A0A075B6U4 112 aa8.77□□□□□ -1.01
SMCR8-201ENST00000406438 Q8N814 137 aa8.77□□□□□ -1.01
SMCR8-201ENST00000406438 C1orf137Q5JT78 98 aa8.76□□□□□ -1.01
SMCR8-201ENST00000406438 C2orf91Q6ZV80 131 aa8.76□□□□□ -1.01
SMCR8-201ENST00000406438 C1orf195Q5TG92 126 aa8.76□□□□□ -1.01
SMCR8-201ENST00000406438 IGHV6-1A0A0B4J1U7 121 aa8.76□□□□□ -1.01
SMCR8-201ENST00000406438 GOLGB1Q14789 3259 aaKnown RBP8.75□□□□□ -1.01
SMCR8-201ENST00000406438 Q8N6K4 173 aa8.75□□□□□ -1.01
SMCR8-201ENST00000406438 PLA2G2AP14555 144 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms