RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 F8WEM9 126 aa11.62□□□□□ -0.55
COL4A3BP-204ENST00000405807 CDKN2A-AS1Q9UH64 79 aa11.62□□□□□ -0.55
COL4A3BP-204ENST00000405807 PLAC8L1A1L4L8 177 aa11.62□□□□□ -0.55
COL4A3BP-204ENST00000405807 COX7A2LO14548 114 aa11.62□□□□□ -0.55
COL4A3BP-204ENST00000405807 LINC00467Q9BRT7 94 aa11.62□□□□□ -0.55
COL4A3BP-204ENST00000405807 NCOR2Q9Y618 2525 aa11.61□□□□□ -0.55
COL4A3BP-204ENST00000405807 C11orf45Q8TAV5 145 aa11.61□□□□□ -0.55
COL4A3BP-204ENST00000405807 SPTBN4Q9H254 2564 aa11.61□□□□□ -0.55
COL4A3BP-204ENST00000405807 MSMBP08118 114 aa11.61□□□□□ -0.55
COL4A3BP-204ENST00000405807 FAM222AQ5U5X8 452 aa11.61□□□□□ -0.55
COL4A3BP-204ENST00000405807 C10orf99Q6UWK7 81 aa11.61□□□□□ -0.55
COL4A3BP-204ENST00000405807 Q6ZSN1 163 aa11.61□□□□□ -0.55
COL4A3BP-204ENST00000405807 Q9UF83 564 aa11.61□□□□□ -0.55
COL4A3BP-204ENST00000405807 SNURFQ9Y675 71 aa11.6□□□□□ -0.55
COL4A3BP-204ENST00000405807 IGLV5-45A0A087WSX0 123 aa11.6□□□□□ -0.55
COL4A3BP-204ENST00000405807 C19orf84I3L1E1 186 aa11.6□□□□□ -0.55
COL4A3BP-204ENST00000405807 BEAN1Q3B7T3 259 aa11.6□□□□□ -0.55
COL4A3BP-204ENST00000405807 DOPEY2Q9Y3R5 2298 aa11.59□□□□□ -0.55
COL4A3BP-204ENST00000405807 KLKP1Q107X0 134 aa11.59□□□□□ -0.55
COL4A3BP-204ENST00000405807 LINC00308Q8TCZ7 52 aa11.59□□□□□ -0.55
COL4A3BP-204ENST00000405807 FAM229BQ4G0N7 80 aa11.59□□□□□ -0.55
COL4A3BP-204ENST00000405807 WFDC9Q8NEX5 89 aa11.59□□□□□ -0.55
COL4A3BP-204ENST00000405807 DGAT2L7PQ6IED9 249 aa11.59□□□□□ -0.55
COL4A3BP-204ENST00000405807 RMI2Q96E14 147 aa11.58□□□□□ -0.56
COL4A3BP-204ENST00000405807 C14orf132Q9NPU4 83 aa11.58□□□□□ -0.56
COL4A3BP-204ENST00000405807 MUC6Q6W4X9 2439 aa11.58□□□□□ -0.56
COL4A3BP-204ENST00000405807 IGHV3-38A0A0C4DH36 116 aa11.57□□□□□ -0.56
COL4A3BP-204ENST00000405807 IGHV3-53P01767 116 aa11.57□□□□□ -0.56
COL4A3BP-204ENST00000405807 HIVEP3Q5T1R4 2406 aa11.57□□□□□ -0.56
COL4A3BP-204ENST00000405807 Q8N2B8 174 aa11.57□□□□□ -0.56
COL4A3BP-204ENST00000405807 CCL19Q99731 98 aa11.57□□□□□ -0.56
COL4A3BP-204ENST00000405807 Q9H8V8 135 aa11.57□□□□□ -0.56
COL4A3BP-204ENST00000405807 LAMTOR3Q9UHA4 124 aa11.57□□□□□ -0.56
COL4A3BP-204ENST00000405807 HOXD3P31249 432 aaPredicted RBP11.56□□□□□ -0.56
COL4A3BP-204ENST00000405807 DEFB131AP59861 70 aa11.56□□□□□ -0.56
COL4A3BP-204ENST00000405807 IGHV4-30-2A0A087WSY4 118 aa11.56□□□□□ -0.56
COL4A3BP-204ENST00000405807 IGHV4-59P01825 116 aa11.56□□□□□ -0.56
COL4A3BP-204ENST00000405807 PRM2P04554 102 aa11.56□□□□□ -0.56
COL4A3BP-204ENST00000405807 SORL1Q92673 2214 aa11.56□□□□□ -0.56
COL4A3BP-204ENST00000405807 IGLV5-39A0A0G2JS06 123 aa11.55□□□□□ -0.56
COL4A3BP-204ENST00000405807 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.55□□□□□ -0.56
COL4A3BP-204ENST00000405807 A8MTW9 85 aa11.55□□□□□ -0.56
COL4A3BP-204ENST00000405807 C6orf223Q8N319 242 aa11.55□□□□□ -0.56
COL4A3BP-204ENST00000405807 COX6A2Q02221 97 aa11.55□□□□□ -0.56
COL4A3BP-204ENST00000405807 RBM12B-AS1Q9P1G2 102 aa11.55□□□□□ -0.56
COL4A3BP-204ENST00000405807 B4DSR2 109 aa11.54□□□□□ -0.56
COL4A3BP-204ENST00000405807 TRAV7A0A075B6U4 112 aa11.53□□□□□ -0.56
COL4A3BP-204ENST00000405807 DAD1P61803 113 aa11.53□□□□□ -0.56
COL4A3BP-204ENST00000405807 ZNF625Q96I27 306 aaPredicted RBP11.53□□□□□ -0.56
COL4A3BP-204ENST00000405807 Q9HAA7 133 aa11.53□□□□□ -0.56
COL4A3BP-204ENST00000405807 IGHV3OR16-12A0A075B7B8 117 aa11.53□□□□□ -0.56
COL4A3BP-204ENST00000405807 DEFB112Q30KQ8 113 aa11.53□□□□□ -0.56
COL4A3BP-204ENST00000405807 LINC00242Q5T6M2 205 aa11.53□□□□□ -0.56
COL4A3BP-204ENST00000405807 C9orf129Q5T035 196 aaKnown RBP11.52□□□□□ -0.56
COL4A3BP-204ENST00000405807 UBE2E2Q96LR5 201 aa11.52□□□□□ -0.57
COL4A3BP-204ENST00000405807 CENPEQ02224 2701 aa11.51□□□□□ -0.57
COL4A3BP-204ENST00000405807 TRAV13-2A0A0B4J235 113 aa11.51□□□□□ -0.57
COL4A3BP-204ENST00000405807 ATP5EP56381 51 aaPredicted RBP11.51□□□□□ -0.57
COL4A3BP-204ENST00000405807 C11orf72Q8NBR9 251 aa11.51□□□□□ -0.57
COL4A3BP-204ENST00000405807 FAM218AQ96MZ4 157 aa11.51□□□□□ -0.57
COL4A3BP-204ENST00000405807 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.51□□□□□ -0.57
COL4A3BP-204ENST00000405807 ENHOQ6UWT2 76 aa11.5□□□□□ -0.57
COL4A3BP-204ENST00000405807 FAM19A3Q7Z5A8 133 aa11.5□□□□□ -0.57
COL4A3BP-204ENST00000405807 CRYBG3Q68DQ2 2970 aa11.49□□□□□ -0.57
COL4A3BP-204ENST00000405807 A0A087WZ39 114 aa11.49□□□□□ -0.57
COL4A3BP-204ENST00000405807 SMIM1B2RUZ4 78 aa11.49□□□□□ -0.57
COL4A3BP-204ENST00000405807 IBA57-AS1B1ANH7 110 aa11.46□□□□□ -0.57
COL4A3BP-204ENST00000405807 H3BS24 57 aa11.46□□□□□ -0.57
COL4A3BP-204ENST00000405807 INSP01308 110 aa11.46□□□□□ -0.57
COL4A3BP-204ENST00000405807 GNLYP22749 145 aa11.46□□□□□ -0.57
COL4A3BP-204ENST00000405807 NDUFC1O43677 76 aa11.46□□□□□ -0.58
COL4A3BP-204ENST00000405807 SLURP1P55000 103 aa11.46□□□□□ -0.58
COL4A3BP-204ENST00000405807 APOC4P55056 127 aa11.45□□□□□ -0.58
COL4A3BP-204ENST00000405807 HIST2H2BCQ6DN03 193 aa11.45□□□□□ -0.58
COL4A3BP-204ENST00000405807 HIST2H2BDQ6DRA6 164 aa11.45□□□□□ -0.58
COL4A3BP-204ENST00000405807 SPG11Q96JI7 2443 aa11.45□□□□□ -0.58
COL4A3BP-204ENST00000405807 CREBBPQ92793 2442 aa11.45□□□□□ -0.58
COL4A3BP-204ENST00000405807 PF4P02776 101 aa11.45□□□□□ -0.58
COL4A3BP-204ENST00000405807 ATP5EP2Q5VTU8 51 aa11.45□□□□□ -0.58
COL4A3BP-204ENST00000405807 TM2D3Q9BRN9 247 aa11.44□□□□□ -0.58
COL4A3BP-204ENST00000405807 CSPG4Q6UVK1 2322 aa11.44□□□□□ -0.58
COL4A3BP-204ENST00000405807 MAP6D1Q9H9H5 199 aa11.44□□□□□ -0.58
COL4A3BP-204ENST00000405807 RPL36AP83881 106 aaKnown RBP11.43□□□□□ -0.58
COL4A3BP-204ENST00000405807 ESRGQ1W209 222 aa11.43□□□□□ -0.58
COL4A3BP-204ENST00000405807 RPL36ALQ969Q0 106 aaKnown RBP11.43□□□□□ -0.58
COL4A3BP-204ENST00000405807 C11orf68Q9H3H3 251 aaKnown RBP11.43□□□□□ -0.58
COL4A3BP-204ENST00000405807 ZNF702PQ9H963 129 aa11.43□□□□□ -0.58
COL4A3BP-204ENST00000405807 DEFB136Q30KP8 78 aa11.42□□□□□ -0.58
COL4A3BP-204ENST00000405807 LINC01356Q8N9X3 169 aa11.42□□□□□ -0.58
COL4A3BP-204ENST00000405807 CDC42SE2Q9NRR3 84 aa11.42□□□□□ -0.58
COL4A3BP-204ENST00000405807 UTP20O75691 2785 aaKnown RBP11.42□□□□□ -0.58
COL4A3BP-204ENST00000405807 TRBV10-1A0A0K0K1A3 114 aa11.41□□□□□ -0.58
COL4A3BP-204ENST00000405807 BCE1O60756 84 aa11.41□□□□□ -0.58
COL4A3BP-204ENST00000405807 DSCR9P59020 149 aa11.41□□□□□ -0.58
COL4A3BP-204ENST00000405807 OBSCN-AS1Q96MR7 158 aa11.41□□□□□ -0.58
COL4A3BP-204ENST00000405807 OVOL2Q9BRP0 275 aa11.41□□□□□ -0.58
COL4A3BP-204ENST00000405807 TRGV1A0A0A0MS02 117 aa11.4□□□□□ -0.58
COL4A3BP-204ENST00000405807 NTM-AS1Q6ZSK4 140 aa11.4□□□□□ -0.58
COL4A3BP-204ENST00000405807 DYNLRB2Q8TF09 96 aa11.4□□□□□ -0.58
COL4A3BP-204ENST00000405807 CELSR2Q9HCU4 2923 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms