RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 LINC00959A0A1B0GUT2 108 aa7.01□□□□□ -1.29
RPAIN-204ENST00000405578 IGIPA6NJ69 53 aa7.01□□□□□ -1.29
RPAIN-204ENST00000405578 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.01□□□□□ -1.29
RPAIN-204ENST00000405578 SNRPEP62304 92 aaKnown RBP7.01□□□□□ -1.29
RPAIN-204ENST00000405578 RNASE13Q5GAN3 156 aaKnown RBP7.01□□□□□ -1.29
RPAIN-204ENST00000405578 CHCHD10Q8WYQ3 142 aaPredicted RBP7.01□□□□□ -1.29
RPAIN-204ENST00000405578 ATP5LO75964 103 aa7□□□□□ -1.29
RPAIN-204ENST00000405578 XCL1P47992 114 aa7□□□□□ -1.29
RPAIN-204ENST00000405578 C14orf177Q52M58 125 aa7□□□□□ -1.29
RPAIN-204ENST00000405578 CFAP161Q6P656 301 aa7□□□□□ -1.29
RPAIN-204ENST00000405578 URB1-AS1Q96HZ7 61 aa7□□□□□ -1.29
RPAIN-204ENST00000405578 OPRPNQ99935 248 aaPredicted RBP7□□□□□ -1.29
RPAIN-204ENST00000405578 A0A087WTM6 91 aa6.99□□□□□ -1.29
RPAIN-204ENST00000405578 GAGE12HA6NDE8 117 aa6.99□□□□□ -1.29
RPAIN-204ENST00000405578 HIST1H2BKO60814 126 aa6.99□□□□□ -1.29
RPAIN-204ENST00000405578 SERF1AO75920 110 aa6.99□□□□□ -1.29
RPAIN-204ENST00000405578 HIST1H2BJP06899 126 aa6.99□□□□□ -1.29
RPAIN-204ENST00000405578 HIST1H2BOP23527 126 aa6.99□□□□□ -1.29
RPAIN-204ENST00000405578 HIST1H2BBP33778 126 aa6.99□□□□□ -1.29
RPAIN-204ENST00000405578 HIST1H2BDP58876 126 aa6.99□□□□□ -1.29
RPAIN-204ENST00000405578 HIST1H2BCP62807 126 aa6.99□□□□□ -1.29
RPAIN-204ENST00000405578 SEC11AP67812 179 aa6.99□□□□□ -1.29
RPAIN-204ENST00000405578 HIST2H2BEQ16778 126 aa6.99□□□□□ -1.29
RPAIN-204ENST00000405578 LBHQ53QV2 105 aaPredicted RBP6.99□□□□□ -1.29
RPAIN-204ENST00000405578 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.99□□□□□ -1.29
RPAIN-204ENST00000405578 CD164L2Q6UWJ8 174 aa6.99□□□□□ -1.29
RPAIN-204ENST00000405578 HIST1H2BHQ93079 126 aa6.99□□□□□ -1.29
RPAIN-204ENST00000405578 HIST1H2BNQ99877 126 aa6.99□□□□□ -1.29
RPAIN-204ENST00000405578 HIST1H2BMQ99879 126 aa6.99□□□□□ -1.29
RPAIN-204ENST00000405578 VPS13BQ7Z7G8 4022 aa6.98□□□□□ -1.29
RPAIN-204ENST00000405578 PMCHL1Q16048 86 aa6.98□□□□□ -1.29
RPAIN-204ENST00000405578 C4orf48Q5BLP8 95 aa6.98□□□□□ -1.29
RPAIN-204ENST00000405578 BAALCQ8WXS3 180 aa6.98□□□□□ -1.29
RPAIN-204ENST00000405578 COX7A2LO14548 114 aa6.97□□□□□ -1.29
RPAIN-204ENST00000405578 MALP21145 153 aa6.97□□□□□ -1.29
RPAIN-204ENST00000405578 PDZD11Q5EBL8 140 aa6.97□□□□□ -1.29
RPAIN-204ENST00000405578 AMELXQ99217 191 aa6.97□□□□□ -1.29
RPAIN-204ENST00000405578 HSPB8Q9UJY1 196 aa6.97□□□□□ -1.29
RPAIN-204ENST00000405578 A0A096LNJ9 63 aa6.96□□□□□ -1.3
RPAIN-204ENST00000405578 LRCOL1A6NCL2 159 aa6.96□□□□□ -1.3
RPAIN-204ENST00000405578 USP17L23D6RBM5 183 aa6.96□□□□□ -1.3
RPAIN-204ENST00000405578 LECT2O14960 151 aa6.96□□□□□ -1.3
RPAIN-204ENST00000405578 LEPROTL1O95214 131 aa6.96□□□□□ -1.3
RPAIN-204ENST00000405578 APOMO95445 188 aa6.96□□□□□ -1.3
RPAIN-204ENST00000405578 PRSS1P07477 247 aa6.96□□□□□ -1.3
RPAIN-204ENST00000405578 S100A2P29034 98 aa6.96□□□□□ -1.3
RPAIN-204ENST00000405578 UBE2D1P51668 147 aa6.96□□□□□ -1.3
RPAIN-204ENST00000405578 XGP55808 180 aa6.96□□□□□ -1.3
RPAIN-204ENST00000405578 NDUFA6P56556 154 aa6.96□□□□□ -1.3
RPAIN-204ENST00000405578 FOXI1Q12951 378 aa6.96□□□□□ -1.3
RPAIN-204ENST00000405578 PMVKQ15126 192 aa6.96□□□□□ -1.3
RPAIN-204ENST00000405578 KRTAP26-1Q6PEX3 210 aa6.96□□□□□ -1.3
RPAIN-204ENST00000405578 FAM19A2Q8N3H0 131 aa6.96□□□□□ -1.3
RPAIN-204ENST00000405578 Q8N814 137 aa6.96□□□□□ -1.3
RPAIN-204ENST00000405578 NTN5Q8WTR8 489 aaPredicted RBP6.96□□□□□ -1.3
RPAIN-204ENST00000405578 FAM104AQ969W3 186 aa6.96□□□□□ -1.3
RPAIN-204ENST00000405578 GEMIN7Q9H840 131 aaKnown RBP6.96□□□□□ -1.3
RPAIN-204ENST00000405578 PGPEP1Q9NXJ5 209 aa6.96□□□□□ -1.3
RPAIN-204ENST00000405578 HERVK_113P63121 156 aa6.95□□□□□ -1.3
RPAIN-204ENST00000405578 CDPF1Q6NVV7 123 aa6.95□□□□□ -1.3
RPAIN-204ENST00000405578 CST9LQ9H4G1 147 aa6.95□□□□□ -1.3
RPAIN-204ENST00000405578 IGHV1-58A0A0C4DH39 117 aa6.94□□□□□ -1.3
RPAIN-204ENST00000405578 hDV102S1A0JD36 115 aa6.94□□□□□ -1.3
RPAIN-204ENST00000405578 LINC00242Q5T6M2 205 aa6.94□□□□□ -1.3
RPAIN-204ENST00000405578 LINC00173Q6ZV60 143 aa6.94□□□□□ -1.3
RPAIN-204ENST00000405578 IFI27L1Q96BM0 104 aa6.94□□□□□ -1.3
RPAIN-204ENST00000405578 FUSP35637 526 aaKnown RBP eCLIP6.93□□□□□ -1.3
RPAIN-204ENST00000405578 ZC2HC1BQ5TFG8 222 aa6.93□□□□□ -1.3
RPAIN-204ENST00000405578 C5orf38Q86SI9 138 aa6.93□□□□□ -1.3
RPAIN-204ENST00000405578 PACRGQ96M98 296 aaPredicted RBP6.93□□□□□ -1.3
RPAIN-204ENST00000405578 IGLV5-52A0A0A0MRZ9 124 aa6.92□□□□□ -1.3
RPAIN-204ENST00000405578 IGHV3OR16-9A0A0B4J2B5 98 aa6.92□□□□□ -1.3
RPAIN-204ENST00000405578 TINCRA0A1B0GVN0 87 aa6.92□□□□□ -1.3
RPAIN-204ENST00000405578 TSTD3H0UI37 97 aa6.92□□□□□ -1.3
RPAIN-204ENST00000405578 ZNF561-AS1K7EIQ3 104 aa6.92□□□□□ -1.3
RPAIN-204ENST00000405578 SMR3BP02814 79 aaPredicted RBP6.92□□□□□ -1.3
RPAIN-204ENST00000405578 FABP4P15090 132 aa6.92□□□□□ -1.3
RPAIN-204ENST00000405578 LINC00310P59036 64 aa6.92□□□□□ -1.3
RPAIN-204ENST00000405578 WFDC2Q14508 124 aa6.92□□□□□ -1.3
RPAIN-204ENST00000405578 COA6Q5JTJ3 125 aaKnown RBP6.92□□□□□ -1.3
RPAIN-204ENST00000405578 FAM19A3Q7Z5A8 133 aa6.92□□□□□ -1.3
RPAIN-204ENST00000405578 HMCN2Q8NDA2 5059 aa6.91□□□□□ -1.3
RPAIN-204ENST00000405578 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.91□□□□□ -1.3
RPAIN-204ENST00000405578 A0A087WZ39 114 aa6.91□□□□□ -1.3
RPAIN-204ENST00000405578 GVQW2A0A096LPI5 108 aaPredicted RBP6.91□□□□□ -1.3
RPAIN-204ENST00000405578 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.91□□□□□ -1.3
RPAIN-204ENST00000405578 TRAV12-1A0A0B4J245 112 aa6.91□□□□□ -1.3
RPAIN-204ENST00000405578 A0A0J9YXV3 536 aa6.91□□□□□ -1.3
RPAIN-204ENST00000405578 H3BRM9 83 aa6.91□□□□□ -1.3
RPAIN-204ENST00000405578 NUPR1O60356 82 aa6.91□□□□□ -1.3
RPAIN-204ENST00000405578 LINC01561Q8N1V8 128 aa6.91□□□□□ -1.3
RPAIN-204ENST00000405578 MAP1LC3CQ9BXW4 147 aa6.91□□□□□ -1.3
RPAIN-204ENST00000405578 CHTOPQ9Y3Y2 248 aaKnown RBP6.91□□□□□ -1.3
RPAIN-204ENST00000405578 HIGD2BQ4VC39 106 aa6.9□□□□□ -1.3
RPAIN-204ENST00000405578 C15orf56Q8N910 161 aa6.9□□□□□ -1.3
RPAIN-204ENST00000405578 OR10D4PQ8NGN7 298 aa6.9□□□□□ -1.3
RPAIN-204ENST00000405578 IGHV3-64A0A075B6Q5 118 aa6.89□□□□□ -1.31
RPAIN-204ENST00000405578 H0Y8G0 127 aa6.89□□□□□ -1.31
RPAIN-204ENST00000405578 PRSS2P07478 247 aa6.89□□□□□ -1.31
RPAIN-204ENST00000405578 IGLC3P0DOY3 106 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms