RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 KHDC1LQ5JSQ8 128 aa14.2□□□□□ -0.14
CCDC47-202ENST00000403162 TEP1Q99973 2627 aaKnown RBP14.2□□□□□ -0.14
CCDC47-202ENST00000403162 GAGE5Q13069 117 aa14.19□□□□□ -0.14
CCDC47-202ENST00000403162 GAGE6Q13070 117 aa14.19□□□□□ -0.14
CCDC47-202ENST00000403162 C11orf44Q8N8P7 122 aa14.19□□□□□ -0.14
CCDC47-202ENST00000403162 IL17DQ8TAD2 202 aa14.19□□□□□ -0.14
CCDC47-202ENST00000403162 COPS9Q8WXC6 57 aa14.19□□□□□ -0.14
CCDC47-202ENST00000403162 CSDC2Q9Y534 153 aaKnown RBP14.19□□□□□ -0.14
CCDC47-202ENST00000403162 NIPBLQ6KC79 2804 aaeCLIP14.18□□□□□ -0.146e-8■□□□□ 9.1
CCDC47-202ENST00000403162 HIST2H2BDQ6DRA6 164 aa14.18□□□□□ -0.14
CCDC47-202ENST00000403162 TTC32Q5I0X7 151 aa14.17□□□□□ -0.14
CCDC47-202ENST00000403162 SMIM1B2RUZ4 78 aa14.17□□□□□ -0.14
CCDC47-202ENST00000403162 LINC00694P0DN24 101 aa14.16□□□□□ -0.14
CCDC47-202ENST00000403162 TRBV10-1A0A0K0K1A3 114 aa14.15□□□□□ -0.14
CCDC47-202ENST00000403162 COX7A2LO14548 114 aa14.15□□□□□ -0.14
CCDC47-202ENST00000403162 XCL2Q9UBD3 114 aa14.15□□□□□ -0.14
CCDC47-202ENST00000403162 ZNF625Q96I27 306 aaPredicted RBP14.15□□□□□ -0.15
CCDC47-202ENST00000403162 C2CD3Q4AC94 2353 aa14.14□□□□□ -0.15
CCDC47-202ENST00000403162 RPL36AP83881 106 aaKnown RBP14.14□□□□□ -0.15
CCDC47-202ENST00000403162 SHISA2Q6UWI4 295 aa14.14□□□□□ -0.15
CCDC47-202ENST00000403162 C1orf158Q8N1D5 194 aa14.14□□□□□ -0.15
CCDC47-202ENST00000403162 RPL36ALQ969Q0 106 aaKnown RBP14.14□□□□□ -0.15
CCDC47-202ENST00000403162 DAZ2Q13117 558 aaKnown RBP14.13□□□□□ -0.15
CCDC47-202ENST00000403162 ODF3L2Q3SX64 289 aa14.13□□□□□ -0.15
CCDC47-202ENST00000403162 SOSTDC1Q6X4U4 206 aa14.13□□□□□ -0.15
CCDC47-202ENST00000403162 DAZ4Q86SG3 579 aaKnown RBP14.13□□□□□ -0.15
CCDC47-202ENST00000403162 DAZ3Q9NR90 486 aaKnown RBP14.13□□□□□ -0.15
CCDC47-202ENST00000403162 JMJD1CQ15652 2540 aa14.13□□□□□ -0.15
CCDC47-202ENST00000403162 TRGV1A0A0A0MS02 117 aa14.13□□□□□ -0.15
CCDC47-202ENST00000403162 K7EQD1 137 aa14.13□□□□□ -0.15
CCDC47-202ENST00000403162 PPDPFQ9H3Y8 114 aa14.13□□□□□ -0.15
CCDC47-202ENST00000403162 A0A1W2PRX2 142 aa14.12□□□□□ -0.15
CCDC47-202ENST00000403162 NTM-AS1Q6ZSK4 140 aa14.12□□□□□ -0.15
CCDC47-202ENST00000403162 SETD2Q9BYW2 2564 aaPredicted RBP14.12□□□□□ -0.15
CCDC47-202ENST00000403162 HERV-K104P63124 156 aa14.12□□□□□ -0.15
CCDC47-202ENST00000403162 TRAV25A0A0B4J276 109 aa14.11□□□□□ -0.15
CCDC47-202ENST00000403162 F5H768 121 aa14.11□□□□□ -0.15
CCDC47-202ENST00000403162 PRIMA1Q86XR5 153 aa14.11□□□□□ -0.15
CCDC47-202ENST00000403162 STHQ8IWL8 128 aa14.11□□□□□ -0.15
CCDC47-202ENST00000403162 TRAV13-1A0A0B4J241 112 aa14.1□□□□□ -0.15
CCDC47-202ENST00000403162 CDC42SE2Q9NRR3 84 aa14.1□□□□□ -0.15
CCDC47-202ENST00000403162 GAGE12JA6NER3 117 aa14.1□□□□□ -0.15
CCDC47-202ENST00000403162 GAGE7O76087 117 aa14.1□□□□□ -0.15
CCDC47-202ENST00000403162 GAGE12FP0CL80 117 aa14.1□□□□□ -0.15
CCDC47-202ENST00000403162 GAGE12GP0CL81 117 aa14.1□□□□□ -0.15
CCDC47-202ENST00000403162 GAGE12IP0CL82 117 aa14.1□□□□□ -0.15
CCDC47-202ENST00000403162 GAGE4Q13068 117 aa14.1□□□□□ -0.15
CCDC47-202ENST00000403162 A0A0U1RRA0 63 aa14.09□□□□□ -0.15
CCDC47-202ENST00000403162 MEIG1Q5JSS6 88 aa14.09□□□□□ -0.15
CCDC47-202ENST00000403162 B5MCH6 92 aa14.09□□□□□ -0.15
CCDC47-202ENST00000403162 TRBV7-7A0A0K0K1E9 115 aa14.08□□□□□ -0.16
CCDC47-202ENST00000403162 ACYP1P07311 99 aa14.08□□□□□ -0.16
CCDC47-202ENST00000403162 KRTAP10-3P60369 221 aa14.08□□□□□ -0.16
CCDC47-202ENST00000403162 TRACP01848 142 aa14.07□□□□□ -0.16
CCDC47-202ENST00000403162 Q6ZTI0 123 aa14.07□□□□□ -0.16
CCDC47-202ENST00000403162 SS18L2Q9UHA2 77 aa14.06□□□□□ -0.16
CCDC47-202ENST00000403162 CCDC179H3BU77 68 aa14.06□□□□□ -0.16
CCDC47-202ENST00000403162 KRTAP24-1Q3LI83 254 aa14.05□□□□□ -0.16
CCDC47-202ENST00000403162 TMEM243Q9BU79 118 aa14.03□□□□□ -0.16
CCDC47-202ENST00000403162 CCL24O00175 119 aa14.02□□□□□ -0.16
CCDC47-202ENST00000403162 PF4P02776 101 aa14.02□□□□□ -0.16
CCDC47-202ENST00000403162 UBE2L6O14933 153 aa14.02□□□□□ -0.17
CCDC47-202ENST00000403162 FAM222AQ5U5X8 452 aa14.01□□□□□ -0.17
CCDC47-202ENST00000403162 SVIPQ8NHG7 77 aa14.01□□□□□ -0.17
CCDC47-202ENST00000403162 IMUPQ9GZP8 106 aa14□□□□□ -0.17
CCDC47-202ENST00000403162 TRAV13-2A0A0B4J235 113 aa13.99□□□□□ -0.17
CCDC47-202ENST00000403162 BAALC-AS2P0C853 105 aa13.99□□□□□ -0.17
CCDC47-202ENST00000403162 NOP10Q9NPE3 64 aaKnown RBP13.99□□□□□ -0.17
CCDC47-202ENST00000403162 FAM218AQ96MZ4 157 aa13.99□□□□□ -0.17
CCDC47-202ENST00000403162 RPL28P46779 137 aaKnown RBP13.98□□□□□ -0.17
CCDC47-202ENST00000403162 C22orf24Q9Y442 160 aa13.98□□□□□ -0.17
CCDC47-202ENST00000403162 SDIM1Q6ZPB5 146 aa13.97□□□□□ -0.17
CCDC47-202ENST00000403162 COX7B2Q8TF08 81 aa13.97□□□□□ -0.17
CCDC47-202ENST00000403162 C16orf74Q96GX8 76 aa13.96□□□□□ -0.17
CCDC47-202ENST00000403162 ATRQ13535 2644 aa13.96□□□□□ -0.17
CCDC47-202ENST00000403162 PLAC8L1A1L4L8 177 aa13.96□□□□□ -0.18
CCDC47-202ENST00000403162 CRPP02741 224 aa13.96□□□□□ -0.18
CCDC47-202ENST00000403162 LINC00643Q86TS7 51 aa13.96□□□□□ -0.18
CCDC47-202ENST00000403162 TRBV6-4A0A1B0GX49 114 aa13.95□□□□□ -0.18
CCDC47-202ENST00000403162 GIG44P09565 113 aaPredicted RBP13.95□□□□□ -0.18
CCDC47-202ENST00000403162 SMCR5Q8TEV8 140 aa13.95□□□□□ -0.18
CCDC47-202ENST00000403162 MIR7-3HGQ8N6C7 128 aa13.94□□□□□ -0.18
CCDC47-202ENST00000403162 CMC4P56277 68 aaPredicted RBP13.93□□□□□ -0.18
CCDC47-202ENST00000403162 LINC00337Q8N6G1 96 aa13.93□□□□□ -0.18
CCDC47-202ENST00000403162 CHCHD5Q9BSY4 110 aa13.93□□□□□ -0.18
CCDC47-202ENST00000403162 IGKV2-28A0A075B6P5 120 aa13.93□□□□□ -0.18
CCDC47-202ENST00000403162 IGKV2D-28P01615 120 aa13.93□□□□□ -0.18
CCDC47-202ENST00000403162 INAFM2P0DMQ5 153 aa13.93□□□□□ -0.18
CCDC47-202ENST00000403162 OVOL2Q9BRP0 275 aa13.93□□□□□ -0.18
CCDC47-202ENST00000403162 FBN1P35555 2871 aaKnown RBP13.92□□□□□ -0.18
CCDC47-202ENST00000403162 TRGV2A0A075B6R0 118 aa13.92□□□□□ -0.18
CCDC47-202ENST00000403162 LOC100131303A0A0U1RQF7 123 aa13.92□□□□□ -0.18
CCDC47-202ENST00000403162 SND1-IT1Q9HBX3 110 aa13.92□□□□□ -0.18
CCDC47-202ENST00000403162 MALP21145 153 aa13.91□□□□□ -0.18
CCDC47-202ENST00000403162 TENM1Q9UKZ4 2725 aa13.91□□□□□ -0.18
CCDC47-202ENST00000403162 WNK1Q9H4A3 2382 aa13.9□□□□□ -0.18
CCDC47-202ENST00000403162 FAM236AA0A1B0GUQ0 79 aa13.9□□□□□ -0.18
CCDC47-202ENST00000403162 FAM236BA0A1B0GV22 79 aa13.9□□□□□ -0.18
CCDC47-202ENST00000403162 C3orf56Q8N813 242 aa13.9□□□□□ -0.18
CCDC47-202ENST00000403162 IGHV3OR16-9A0A0B4J2B5 98 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms