RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 LINC00474Q9P2X8 69 aa7.05□□□□□ -1.28
SMAD9-203ENST00000399275 LRP4O75096 1905 aa7.05□□□□□ -1.28
SMAD9-203ENST00000399275 GAS8-AS1O95177 125 aa7.05□□□□□ -1.28
SMAD9-203ENST00000399275 Q8N814 137 aa7.05□□□□□ -1.28
SMAD9-203ENST00000399275 C16orf74Q96GX8 76 aa7.05□□□□□ -1.28
SMAD9-203ENST00000399275 KIAA1549Q9HCM3 1950 aa7.05□□□□□ -1.28
SMAD9-203ENST00000399275 FHL2Q14192 279 aa7.05□□□□□ -1.28
SMAD9-203ENST00000399275 A0A1W2PNU3 283 aaPredicted RBP7.05□□□□□ -1.28
SMAD9-203ENST00000399275 UNQ9165/PRO28630Q6UXU0 137 aa7.05□□□□□ -1.28
SMAD9-203ENST00000399275 PCDH15Q96QU1 1955 aa7.05□□□□□ -1.28
SMAD9-203ENST00000399275 M0QY20 66 aa7.05□□□□□ -1.28
SMAD9-203ENST00000399275 CEP350Q5VT06 3117 aa7.04□□□□□ -1.28
SMAD9-203ENST00000399275 A0A087WYN8 130 aa7.04□□□□□ -1.28
SMAD9-203ENST00000399275 LINC01546A6NGU7 62 aa7.04□□□□□ -1.28
SMAD9-203ENST00000399275 POLR2KP53803 58 aaKnown RBP7.04□□□□□ -1.28
SMAD9-203ENST00000399275 Q6ZSV7 163 aa7.04□□□□□ -1.28
SMAD9-203ENST00000399275 PSMG3-AS1Q96PY0 264 aa7.04□□□□□ -1.28
SMAD9-203ENST00000399275 C11orf21Q9P2W6 132 aa7.04□□□□□ -1.28
SMAD9-203ENST00000399275 ZDBF2Q9HCK1 2354 aa7.04□□□□□ -1.28
SMAD9-203ENST00000399275 EML5Q05BV3 1969 aa7.04□□□□□ -1.28
SMAD9-203ENST00000399275 DEFB1P60022 68 aa7.03□□□□□ -1.28
SMAD9-203ENST00000399275 C9orf116Q5BN46 136 aaPredicted RBP7.03□□□□□ -1.28
SMAD9-203ENST00000399275 IGIPA6NJ69 53 aa7.03□□□□□ -1.28
SMAD9-203ENST00000399275 KLK12Q9UKR0 248 aa7.03□□□□□ -1.28
SMAD9-203ENST00000399275 ZNF843Q8N446 348 aa7.02□□□□□ -1.29
SMAD9-203ENST00000399275 DHRS4-AS1Q9P1J3 65 aa7.02□□□□□ -1.29
SMAD9-203ENST00000399275 MALRD1Q5VYJ5 2156 aa7.02□□□□□ -1.29
SMAD9-203ENST00000399275 TNCP24821 2201 aa7.02□□□□□ -1.29
SMAD9-203ENST00000399275 NAV3Q8IVL0 2385 aa7.02□□□□□ -1.29
SMAD9-203ENST00000399275 HCFC1P51610 2035 aa7.02□□□□□ -1.29
SMAD9-203ENST00000399275 IGLV2-18A0A075B6J9 118 aa7.02□□□□□ -1.29
SMAD9-203ENST00000399275 TRBV6-8A0A0A6YYG3 113 aa7.02□□□□□ -1.29
SMAD9-203ENST00000399275 ZFP36P26651 326 aaKnown RBP7.01□□□□□ -1.29
SMAD9-203ENST00000399275 C10orf25Q5T742 122 aa7.01□□□□□ -1.29
SMAD9-203ENST00000399275 LINC00575Q6W349 94 aa7.01□□□□□ -1.29
SMAD9-203ENST00000399275 NHLRC4P0CG21 123 aaPredicted RBP7.01□□□□□ -1.29
SMAD9-203ENST00000399275 WISP2O76076 250 aa7.01□□□□□ -1.29
SMAD9-203ENST00000399275 TSHBP01222 138 aa7.01□□□□□ -1.29
SMAD9-203ENST00000399275 CCL18P55774 89 aa7.01□□□□□ -1.29
SMAD9-203ENST00000399275 IGLV4-69A0A075B6H9 119 aa7□□□□□ -1.29
SMAD9-203ENST00000399275 C1orf64Q8NEQ6 169 aa7□□□□□ -1.29
SMAD9-203ENST00000399275 CACNA1HO95180 2353 aa7□□□□□ -1.29
SMAD9-203ENST00000399275 Q96MF0 132 aa7□□□□□ -1.29
SMAD9-203ENST00000399275 FBXL19-AS1Q494R0 122 aa6.99□□□□□ -1.29
SMAD9-203ENST00000399275 PRR9Q5T870 116 aa6.99□□□□□ -1.29
SMAD9-203ENST00000399275 GRNP28799 593 aaKnown RBP6.99□□□□□ -1.29
SMAD9-203ENST00000399275 CHCHD10Q8WYQ3 142 aaPredicted RBP6.99□□□□□ -1.29
SMAD9-203ENST00000399275 RBM12B-AS1Q9P1G2 102 aa6.98□□□□□ -1.29
SMAD9-203ENST00000399275 PLXNB1O43157 2135 aa6.98□□□□□ -1.29
SMAD9-203ENST00000399275 TRBV6-4A0A1B0GX49 114 aa6.98□□□□□ -1.29
SMAD9-203ENST00000399275 SPINK1P00995 79 aa6.98□□□□□ -1.29
SMAD9-203ENST00000399275 SPINK6Q6UWN8 80 aa6.98□□□□□ -1.29
SMAD9-203ENST00000399275 SSBP3-AS1Q7Z2R9 100 aa6.98□□□□□ -1.29
SMAD9-203ENST00000399275 KLLNB2CW77 178 aa6.98□□□□□ -1.29
SMAD9-203ENST00000399275 REG3AQ06141 175 aa6.98□□□□□ -1.29
SMAD9-203ENST00000399275 C1orf137Q5JT78 98 aa6.98□□□□□ -1.29
SMAD9-203ENST00000399275 PRR15Q8IV56 129 aa6.98□□□□□ -1.29
SMAD9-203ENST00000399275 MED13LQ71F56 2210 aa6.98□□□□□ -1.29
SMAD9-203ENST00000399275 M0R378 163 aa6.97□□□□□ -1.29
SMAD9-203ENST00000399275 CCL24O00175 119 aa6.97□□□□□ -1.29
SMAD9-203ENST00000399275 TSPEAR-AS2P59090 65 aa6.97□□□□□ -1.29
SMAD9-203ENST00000399275 A6NDX4 124 aa6.97□□□□□ -1.29
SMAD9-203ENST00000399275 SMIM29Q86T20 159 aa6.97□□□□□ -1.29
SMAD9-203ENST00000399275 TANC2Q9HCD6 1990 aa6.97□□□□□ -1.29
SMAD9-203ENST00000399275 K7EQG2 157 aa6.97□□□□□ -1.29
SMAD9-203ENST00000399275 ADAMTSL4-AS1Q5T5F5 129 aa6.97□□□□□ -1.29
SMAD9-203ENST00000399275 LINC01548A6NM66 108 aa6.96□□□□□ -1.29
SMAD9-203ENST00000399275 SLURP1P55000 103 aa6.96□□□□□ -1.29
SMAD9-203ENST00000399275 IGKV2-28A0A075B6P5 120 aa6.95□□□□□ -1.3
SMAD9-203ENST00000399275 IGKV2D-28P01615 120 aa6.95□□□□□ -1.3
SMAD9-203ENST00000399275 DEFB121Q5J5C9 76 aa6.95□□□□□ -1.3
SMAD9-203ENST00000399275 DEFB136Q30KP8 78 aa6.95□□□□□ -1.3
SMAD9-203ENST00000399275 COX17Q14061 63 aa6.94□□□□□ -1.3
SMAD9-203ENST00000399275 MUC7Q8TAX7 377 aa6.94□□□□□ -1.3
SMAD9-203ENST00000399275 EXPH5Q8NEV8 1989 aa6.94□□□□□ -1.3
SMAD9-203ENST00000399275 TM2D3Q9BRN9 247 aa6.94□□□□□ -1.3
SMAD9-203ENST00000399275 SPART-AS1P0CW21 52 aa6.93□□□□□ -1.3
SMAD9-203ENST00000399275 PRO0255Q9UI72 69 aa6.93□□□□□ -1.3
SMAD9-203ENST00000399275 CEP192Q8TEP8 1941 aa6.93□□□□□ -1.3
SMAD9-203ENST00000399275 GVINP1Q7Z2Y8 2422 aa6.93□□□□□ -1.3
SMAD9-203ENST00000399275 IGKV2-24A0A0C4DH68 120 aa6.93□□□□□ -1.3
SMAD9-203ENST00000399275 DEFB116Q30KQ4 102 aa6.93□□□□□ -1.3
SMAD9-203ENST00000399275 LOC101927531A0A1B0GV80 90 aa6.93□□□□□ -1.3
SMAD9-203ENST00000399275 RNF223E7ERA6 249 aa6.92□□□□□ -1.3
SMAD9-203ENST00000399275 TRAV10A0A0B4J240 114 aa6.92□□□□□ -1.3
SMAD9-203ENST00000399275 TRAV22A0A0B4J277 110 aa6.92□□□□□ -1.3
SMAD9-203ENST00000399275 FSHBP01225 129 aa6.92□□□□□ -1.3
SMAD9-203ENST00000399275 ACYP2P14621 99 aa6.92□□□□□ -1.3
SMAD9-203ENST00000399275 MAP6D1Q9H9H5 199 aa6.92□□□□□ -1.3
SMAD9-203ENST00000399275 COL4A2P08572 1712 aa6.92□□□□□ -1.3
SMAD9-203ENST00000399275 ACACAQ13085 2346 aa6.91□□□□□ -1.3
SMAD9-203ENST00000399275 C4orf3Q8WVX3 66 aa6.91□□□□□ -1.3
SMAD9-203ENST00000399275 ADORA2A-AS1P86434 159 aa6.91□□□□□ -1.3
SMAD9-203ENST00000399275 F8W735 103 aaPredicted RBP6.91□□□□□ -1.3
SMAD9-203ENST00000399275 LMO4P61968 165 aa6.91□□□□□ -1.3
SMAD9-203ENST00000399275 LINC00482Q8N8I6 264 aa6.91□□□□□ -1.3
SMAD9-203ENST00000399275 MRGPRG-AS1Q2M3A8 158 aa6.9□□□□□ -1.3
SMAD9-203ENST00000399275 AMELXQ99217 191 aa6.9□□□□□ -1.3
SMAD9-203ENST00000399275 X6R8D5 127 aa6.9□□□□□ -1.3
SMAD9-203ENST00000399275 GPR179Q6PRD1 2367 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms