RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 RBMY1DP0C7P1 496 aaKnown RBP7.1□□□□□ -1.27
PTCHD4-202ENST00000398738 PSMB8P28062 276 aa7.1□□□□□ -1.27
PTCHD4-202ENST00000398738 DEFB112Q30KQ8 113 aa7.1□□□□□ -1.27
PTCHD4-202ENST00000398738 NIPBLQ6KC79 2804 aaeCLIP7.09□□□□□ -1.27
PTCHD4-202ENST00000398738 PFN2P35080 140 aa7.09□□□□□ -1.27
PTCHD4-202ENST00000398738 DEFB121Q5J5C9 76 aa7.09□□□□□ -1.27
PTCHD4-202ENST00000398738 LINC00158P58513 81 aa7.09□□□□□ -1.27
PTCHD4-202ENST00000398738 ZNF415Q09FC8 603 aa7.09□□□□□ -1.27
PTCHD4-202ENST00000398738 ABCA12Q86UK0 2595 aa7.09□□□□□ -1.27
PTCHD4-202ENST00000398738 UQCRQO14949 82 aa7.08□□□□□ -1.28
PTCHD4-202ENST00000398738 ACYP1P07311 99 aa7.08□□□□□ -1.28
PTCHD4-202ENST00000398738 USP24Q9UPU5 2620 aa7.08□□□□□ -1.28
PTCHD4-202ENST00000398738 SMIM1B2RUZ4 78 aa7.08□□□□□ -1.28
PTCHD4-202ENST00000398738 MIR7-3HGQ8N6C7 128 aa7.08□□□□□ -1.28
PTCHD4-202ENST00000398738 CYSTM1Q9H1C7 97 aa7.08□□□□□ -1.28
PTCHD4-202ENST00000398738 MXRA5Q9NR99 2828 aa7.08□□□□□ -1.28
PTCHD4-202ENST00000398738 ZFYVE26Q68DK2 2539 aa7.08□□□□□ -1.28
PTCHD4-202ENST00000398738 A0A1B0GX51 115 aa7.08□□□□□ -1.28
PTCHD4-202ENST00000398738 CRPP02741 224 aa7.08□□□□□ -1.28
PTCHD4-202ENST00000398738 A0A087WYN8 130 aa7.07□□□□□ -1.28
PTCHD4-202ENST00000398738 HIST1H4AP62805 103 aaKnown RBP7.07□□□□□ -1.28
PTCHD4-202ENST00000398738 CCL19Q99731 98 aa7.07□□□□□ -1.28
PTCHD4-202ENST00000398738 NCR3O14931 201 aa7.07□□□□□ -1.28
PTCHD4-202ENST00000398738 MSMBP08118 114 aa7.07□□□□□ -1.28
PTCHD4-202ENST00000398738 LINC01600Q96MT4 127 aa7.07□□□□□ -1.28
PTCHD4-202ENST00000398738 LRRK2Q5S007 2527 aa7.06□□□□□ -1.28
PTCHD4-202ENST00000398738 PEMTQ9UBM1 199 aa7.06□□□□□ -1.28
PTCHD4-202ENST00000398738 TIMM17BO60830 172 aa7.06□□□□□ -1.28
PTCHD4-202ENST00000398738 FAM19A5Q7Z5A7 132 aaPredicted RBP7.06□□□□□ -1.28
PTCHD4-202ENST00000398738 Q8N3U1 123 aa7.06□□□□□ -1.28
PTCHD4-202ENST00000398738 LINC00337Q8N6G1 96 aa7.06□□□□□ -1.28
PTCHD4-202ENST00000398738 WFDC9Q8NEX5 89 aa7.06□□□□□ -1.28
PTCHD4-202ENST00000398738 KIR2DL5BQ8NHK3 375 aa7.06□□□□□ -1.28
PTCHD4-202ENST00000398738 Q96MF0 132 aa7.06□□□□□ -1.28
PTCHD4-202ENST00000398738 SND1-IT1Q9HBX3 110 aa7.06□□□□□ -1.28
PTCHD4-202ENST00000398738 C22orf24Q9Y442 160 aa7.06□□□□□ -1.28
PTCHD4-202ENST00000398738 NF1P21359 2839 aa7.05□□□□□ -1.28
PTCHD4-202ENST00000398738 LECT2O14960 151 aa7.05□□□□□ -1.28
PTCHD4-202ENST00000398738 PAX4O43316 350 aa7.05□□□□□ -1.28
PTCHD4-202ENST00000398738 DYNLRB2Q8TF09 96 aa7.05□□□□□ -1.28
PTCHD4-202ENST00000398738 LINC00526Q96FQ7 95 aa7.05□□□□□ -1.28
PTCHD4-202ENST00000398738 IMUPQ9GZP8 106 aa7.05□□□□□ -1.28
PTCHD4-202ENST00000398738 UBE2L6O14933 153 aa7.05□□□□□ -1.28
PTCHD4-202ENST00000398738 INAFM2P0DMQ5 153 aa7.05□□□□□ -1.28
PTCHD4-202ENST00000398738 GNLYP22749 145 aa7.05□□□□□ -1.28
PTCHD4-202ENST00000398738 HIST2H2BCQ6DN03 193 aa7.05□□□□□ -1.28
PTCHD4-202ENST00000398738 CSDC2Q9Y534 153 aaKnown RBP7.05□□□□□ -1.28
PTCHD4-202ENST00000398738 COX7CP15954 63 aa7.05□□□□□ -1.28
PTCHD4-202ENST00000398738 LINC01356Q8N9X3 169 aa7.05□□□□□ -1.28
PTCHD4-202ENST00000398738 NBEAL2Q6ZNJ1 2754 aa7.04□□□□□ -1.28
PTCHD4-202ENST00000398738 TRACP01848 142 aa7.04□□□□□ -1.28
PTCHD4-202ENST00000398738 Q6ZTI0 123 aa7.04□□□□□ -1.28
PTCHD4-202ENST00000398738 SMIM11BQ8TCY0 68 aa7.04□□□□□ -1.28
PTCHD4-202ENST00000398738 DNAJC30Q96LL9 226 aa7.04□□□□□ -1.28
PTCHD4-202ENST00000398738 DSCR8Q96T75 97 aa7.04□□□□□ -1.28
PTCHD4-202ENST00000398738 LINC00846Q9NV44 126 aa7.04□□□□□ -1.28
PTCHD4-202ENST00000398738 LOC100131303A0A0U1RQF7 123 aa7.04□□□□□ -1.28
PTCHD4-202ENST00000398738 RPL36AP83881 106 aaKnown RBP7.04□□□□□ -1.28
PTCHD4-202ENST00000398738 BEAN1Q3B7T3 259 aa7.04□□□□□ -1.28
PTCHD4-202ENST00000398738 NTM-AS1Q6ZSK4 140 aa7.04□□□□□ -1.28
PTCHD4-202ENST00000398738 C5orf38Q86SI9 138 aa7.04□□□□□ -1.28
PTCHD4-202ENST00000398738 C10orf105Q8TEF2 133 aa7.04□□□□□ -1.28
PTCHD4-202ENST00000398738 RPL36ALQ969Q0 106 aaKnown RBP7.04□□□□□ -1.28
PTCHD4-202ENST00000398738 IGLV5-39A0A0G2JS06 123 aa7.03□□□□□ -1.28
PTCHD4-202ENST00000398738 PLA2G2AP14555 144 aa7.02□□□□□ -1.29
PTCHD4-202ENST00000398738 J3KT08 172 aa7.02□□□□□ -1.29
PTCHD4-202ENST00000398738 C11orf72Q8NBR9 251 aa7.02□□□□□ -1.29
PTCHD4-202ENST00000398738 COPS9Q8WXC6 57 aa7.02□□□□□ -1.29
PTCHD4-202ENST00000398738 TEX15Q9BXT5 2789 aa7.02□□□□□ -1.29
PTCHD4-202ENST00000398738 ANKRD17O75179 2603 aaKnown RBP7.01□□□□□ -1.29
PTCHD4-202ENST00000398738 IGLV5-45A0A087WSX0 123 aa7.01□□□□□ -1.29
PTCHD4-202ENST00000398738 TRAV13-2A0A0B4J235 113 aa7.01□□□□□ -1.29
PTCHD4-202ENST00000398738 INSP01308 110 aa7.01□□□□□ -1.29
PTCHD4-202ENST00000398738 BBC3Q96PG8 261 aaPredicted RBP7.01□□□□□ -1.29
PTCHD4-202ENST00000398738 NOP10Q9NPE3 64 aaKnown RBP7.01□□□□□ -1.29
PTCHD4-202ENST00000398738 IGKV2-28A0A075B6P5 120 aa7.01□□□□□ -1.29
PTCHD4-202ENST00000398738 IGKV2D-28P01615 120 aa7.01□□□□□ -1.29
PTCHD4-202ENST00000398738 HILS1P60008 231 aa7.01□□□□□ -1.29
PTCHD4-202ENST00000398738 MAP6D1Q9H9H5 199 aa7.01□□□□□ -1.29
PTCHD4-202ENST00000398738 TRGV2A0A075B6R0 118 aa7.01□□□□□ -1.29
PTCHD4-202ENST00000398738 TMEM89A2RUT3 159 aa7.01□□□□□ -1.29
PTCHD4-202ENST00000398738 ATOX1O00244 68 aa7.01□□□□□ -1.29
PTCHD4-202ENST00000398738 PRR3P79522 188 aaKnown RBP7.01□□□□□ -1.29
PTCHD4-202ENST00000398738 CDC42SE2Q9NRR3 84 aa7.01□□□□□ -1.29
PTCHD4-202ENST00000398738 CLPSL2Q6UWE3 100 aa7□□□□□ -1.29
PTCHD4-202ENST00000398738 C2orf48Q96LS8 159 aa7□□□□□ -1.29
PTCHD4-202ENST00000398738 CFAP46Q8IYW2 2715 aa7□□□□□ -1.29
PTCHD4-202ENST00000398738 MTORP42345 2549 aa7□□□□□ -1.29
PTCHD4-202ENST00000398738 B4DSR2 109 aa7□□□□□ -1.29
PTCHD4-202ENST00000398738 CCL18P55774 89 aa7□□□□□ -1.29
PTCHD4-202ENST00000398738 COX7B2Q8TF08 81 aa7□□□□□ -1.29
PTCHD4-202ENST00000398738 TRAV23DV6A0A075B6W5 121 aa6.99□□□□□ -1.29
PTCHD4-202ENST00000398738 F5H768 121 aa6.99□□□□□ -1.29
PTCHD4-202ENST00000398738 CXCL5P42830 114 aa6.99□□□□□ -1.29
PTCHD4-202ENST00000398738 RPL18AQ02543 176 aaKnown RBP6.99□□□□□ -1.29
PTCHD4-202ENST00000398738 STHQ8IWL8 128 aa6.99□□□□□ -1.29
PTCHD4-202ENST00000398738 WWC2-AS2Q96NR7 200 aa6.99□□□□□ -1.29
PTCHD4-202ENST00000398738 SMIM9A6NGZ8 99 aa6.99□□□□□ -1.29
PTCHD4-202ENST00000398738 PKD1L2Q7Z442 2459 aa6.99□□□□□ -1.29
PTCHD4-202ENST00000398738 USP17L23D6RBM5 183 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms