RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 CELA1Q9UNI1 258 aa17.97■□□□□ 0.47
SHARPIN-202ENST00000398712 KRTAP10-11P60412 298 aa17.96■□□□□ 0.47
SHARPIN-202ENST00000398712 EGFEM1PQ0D2K5 195 aa17.96■□□□□ 0.47
SHARPIN-202ENST00000398712 SPANXDQ9BXN6 97 aa17.96■□□□□ 0.47
SHARPIN-202ENST00000398712 SPANXCQ9NY87 97 aa17.96■□□□□ 0.47
SHARPIN-202ENST00000398712 TIMM17BO60830 172 aa17.96■□□□□ 0.47
SHARPIN-202ENST00000398712 MUSTN1Q8IVN3 82 aa17.96■□□□□ 0.47
SHARPIN-202ENST00000398712 F5H768 121 aa17.95■□□□□ 0.46
SHARPIN-202ENST00000398712 CFC1BP0CG36 223 aa17.95■□□□□ 0.46
SHARPIN-202ENST00000398712 CFC1P0CG37 223 aa17.95■□□□□ 0.46
SHARPIN-202ENST00000398712 TEX48A0A1B0GUV7 120 aa17.94■□□□□ 0.46
SHARPIN-202ENST00000398712 A4D1N5 150 aa17.94■□□□□ 0.46
SHARPIN-202ENST00000398712 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.92■□□□□ 0.46
SHARPIN-202ENST00000398712 A0A1B0GUV1 79 aa17.92■□□□□ 0.46
SHARPIN-202ENST00000398712 MIAQ16674 131 aa17.91■□□□□ 0.46
SHARPIN-202ENST00000398712 COL6A5A8TX70 2615 aa17.91■□□□□ 0.46
SHARPIN-202ENST00000398712 TRAV26-1A0A087WT03 109 aa17.91■□□□□ 0.46
SHARPIN-202ENST00000398712 A0A096LPF7 62 aa17.91■□□□□ 0.46
SHARPIN-202ENST00000398712 TMEM262E9PQX1 116 aa17.91■□□□□ 0.46
SHARPIN-202ENST00000398712 TSPAN13O95857 204 aa17.91■□□□□ 0.46
SHARPIN-202ENST00000398712 PRO1854Q9UHT4 67 aa17.91■□□□□ 0.46
SHARPIN-202ENST00000398712 IGKV3OR2-268A0A0C4DH90 116 aa17.9■□□□□ 0.46
SHARPIN-202ENST00000398712 CIRBPQ14011 172 aaKnown RBP17.9■□□□□ 0.46
SHARPIN-202ENST00000398712 Q9H8V8 135 aa17.9■□□□□ 0.46
SHARPIN-202ENST00000398712 A0A0B4J2C4 111 aa17.89■□□□□ 0.45
SHARPIN-202ENST00000398712 PRSS2P07478 247 aa17.89■□□□□ 0.45
SHARPIN-202ENST00000398712 ADAMTSL4-AS1Q5T5F5 129 aa17.89■□□□□ 0.45
SHARPIN-202ENST00000398712 TRRAPQ9Y4A5 3859 aa17.88■□□□□ 0.45
SHARPIN-202ENST00000398712 RBX1P62877 108 aa17.88■□□□□ 0.45
SHARPIN-202ENST00000398712 NBEAL2Q6ZNJ1 2754 aa17.88■□□□□ 0.45
SHARPIN-202ENST00000398712 IFITM1P13164 125 aa17.86■□□□□ 0.45
SHARPIN-202ENST00000398712 LYRM7Q5U5X0 104 aa17.86■□□□□ 0.45
SHARPIN-202ENST00000398712 HERV-K104P63124 156 aa17.86■□□□□ 0.45
SHARPIN-202ENST00000398712 MRPL23Q16540 153 aaKnown RBP17.86■□□□□ 0.45
SHARPIN-202ENST00000398712 SH2D6Q7Z4S9 175 aa17.86■□□□□ 0.45
SHARPIN-202ENST00000398712 LINC00959A0A1B0GUT2 108 aa17.85■□□□□ 0.45
SHARPIN-202ENST00000398712 HTN3P15516 51 aa17.85■□□□□ 0.45
SHARPIN-202ENST00000398712 ZNF625Q96I27 306 aaPredicted RBP17.85■□□□□ 0.45
SHARPIN-202ENST00000398712 IGHV3OR16-9A0A0B4J2B5 98 aa17.84■□□□□ 0.45
SHARPIN-202ENST00000398712 ICOSQ9Y6W8 199 aa17.83■□□□□ 0.44
SHARPIN-202ENST00000398712 SS18Q15532 418 aa17.82■□□□□ 0.44
SHARPIN-202ENST00000398712 COX7B2Q8TF08 81 aa17.82■□□□□ 0.44
SHARPIN-202ENST00000398712 A0A087WZ39 114 aa17.81■□□□□ 0.44
SHARPIN-202ENST00000398712 LOC107984156A0A0G2JMH3 177 aa17.81■□□□□ 0.44
SHARPIN-202ENST00000398712 ARL17AQ8IVW1 177 aa17.81■□□□□ 0.44
SHARPIN-202ENST00000398712 EIF4EBP3O60516 100 aaPredicted RBP17.81■□□□□ 0.44
SHARPIN-202ENST00000398712 IGHV3-33P01772 117 aa17.8■□□□□ 0.44
SHARPIN-202ENST00000398712 COPS9Q8WXC6 57 aa17.8■□□□□ 0.44
SHARPIN-202ENST00000398712 ERG28Q9UKR5 140 aa17.8■□□□□ 0.44
SHARPIN-202ENST00000398712 RETNQ9HD89 108 aa17.79■□□□□ 0.44
SHARPIN-202ENST00000398712 H3BMG7 143 aa17.79■□□□□ 0.44
SHARPIN-202ENST00000398712 MEIG1Q5JSS6 88 aa17.79■□□□□ 0.44
SHARPIN-202ENST00000398712 F8W1H4 67 aa17.77■□□□□ 0.44
SHARPIN-202ENST00000398712 NPC2P61916 151 aa17.77■□□□□ 0.44
SHARPIN-202ENST00000398712 STAB1Q9NY15 2570 aa17.77■□□□□ 0.44
SHARPIN-202ENST00000398712 G3V4G9 280 aa17.76■□□□□ 0.43
SHARPIN-202ENST00000398712 C11orf68Q9H3H3 251 aaKnown RBP17.76■□□□□ 0.43
SHARPIN-202ENST00000398712 LELP1Q5T871 98 aa17.76■□□□□ 0.43
SHARPIN-202ENST00000398712 SFTA2Q6UW10 78 aa17.76■□□□□ 0.43
SHARPIN-202ENST00000398712 DAND5Q8N907 189 aa17.76■□□□□ 0.43
SHARPIN-202ENST00000398712 OCIAD2Q56VL3 154 aa17.75■□□□□ 0.43
SHARPIN-202ENST00000398712 C5orf38Q86SI9 138 aa17.75■□□□□ 0.43
SHARPIN-202ENST00000398712 TOMM7Q9P0U1 55 aa17.75■□□□□ 0.43
SHARPIN-202ENST00000398712 LINC00308Q8TCZ7 52 aa17.74■□□□□ 0.43
SHARPIN-202ENST00000398712 TRBV20-1A0A075B6N2 111 aa17.74■□□□□ 0.43
SHARPIN-202ENST00000398712 MDFIQ99750 246 aa17.74■□□□□ 0.43
SHARPIN-202ENST00000398712 XCL1P47992 114 aa17.73■□□□□ 0.43
SHARPIN-202ENST00000398712 PSMB2P49721 201 aa17.73■□□□□ 0.43
SHARPIN-202ENST00000398712 Q1RN00 199 aa17.73■□□□□ 0.43
SHARPIN-202ENST00000398712 KRTAP21-3Q3LHN1 58 aa17.73■□□□□ 0.43
SHARPIN-202ENST00000398712 LINC01561Q8N1V8 128 aa17.73■□□□□ 0.43
SHARPIN-202ENST00000398712 SCGB1C2P0DMR2 95 aa17.72■□□□□ 0.43
SHARPIN-202ENST00000398712 CLPSL2Q6UWE3 100 aa17.72■□□□□ 0.43
SHARPIN-202ENST00000398712 LINC00269Q8N2A0 174 aa17.72■□□□□ 0.43
SHARPIN-202ENST00000398712 H7C2G1 150 aa17.71■□□□□ 0.43
SHARPIN-202ENST00000398712 ANGP03950 147 aaKnown RBP17.71■□□□□ 0.43
SHARPIN-202ENST00000398712 A0A0U1RRA0 63 aa17.71■□□□□ 0.43
SHARPIN-202ENST00000398712 H3BNG1 76 aa17.71■□□□□ 0.43
SHARPIN-202ENST00000398712 PPDPFQ9H3Y8 114 aa17.71■□□□□ 0.43
SHARPIN-202ENST00000398712 K7ERU9 68 aa17.68■□□□□ 0.42
SHARPIN-202ENST00000398712 REG3AQ06141 175 aa17.68■□□□□ 0.42
SHARPIN-202ENST00000398712 TCL1BO95988 128 aa17.67■□□□□ 0.42
SHARPIN-202ENST00000398712 CD164L2Q6UWJ8 174 aa17.67■□□□□ 0.42
SHARPIN-202ENST00000398712 PRO0461Q9UI25 63 aa17.67■□□□□ 0.42
SHARPIN-202ENST00000398712 TRBV30A0A0K0K1B3 111 aa17.66■□□□□ 0.42
SHARPIN-202ENST00000398712 WFDC2Q14508 124 aa17.65■□□□□ 0.42
SHARPIN-202ENST00000398712 Q8N3U1 123 aa17.65■□□□□ 0.42
SHARPIN-202ENST00000398712 C6orf226Q5I0X4 101 aa17.64■□□□□ 0.41
SHARPIN-202ENST00000398712 LYPD5Q6UWN5 251 aa17.64■□□□□ 0.41
SHARPIN-202ENST00000398712 SOSTDC1Q6X4U4 206 aa17.64■□□□□ 0.41
SHARPIN-202ENST00000398712 Q8IZM0 81 aa17.64■□□□□ 0.41
SHARPIN-202ENST00000398712 CHCHD10Q8WYQ3 142 aaPredicted RBP17.64■□□□□ 0.41
SHARPIN-202ENST00000398712 CMYA5Q8N3K9 4069 aa17.64■□□□□ 0.41
SHARPIN-202ENST00000398712 IBA57-AS1B1ANH7 110 aa17.63■□□□□ 0.41
SHARPIN-202ENST00000398712 Q6ZTC4 211 aa17.63■□□□□ 0.41
SHARPIN-202ENST00000398712 COX7A2LO14548 114 aa17.63■□□□□ 0.41
SHARPIN-202ENST00000398712 A0A0J9YWU9 116 aa17.62■□□□□ 0.41
SHARPIN-202ENST00000398712 RPL13AP40429 203 aaKnown RBP17.62■□□□□ 0.41
SHARPIN-202ENST00000398712 KPRPQ5T749 579 aaPredicted RBP17.62■□□□□ 0.41
SHARPIN-202ENST00000398712 ANK2Q01484 3957 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms