RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 IGLV4-69A0A075B6H9 119 aa10.4□□□□□ -0.74
PCDHA11-201ENST00000398640 CD164L2Q6UWJ8 174 aa10.4□□□□□ -0.74
PCDHA11-201ENST00000398640 TSHBP01222 138 aa10.39□□□□□ -0.75
PCDHA11-201ENST00000398640 RNASE3P12724 160 aaKnown RBP10.39□□□□□ -0.75
PCDHA11-201ENST00000398640 LINC00959A0A1B0GUT2 108 aa10.39□□□□□ -0.75
PCDHA11-201ENST00000398640 TRBV6-5A0A0K0K1A5 114 aa10.39□□□□□ -0.75
PCDHA11-201ENST00000398640 WFDC13Q8IUB5 93 aa10.39□□□□□ -0.75
PCDHA11-201ENST00000398640 PRR14LQ5THK1 2151 aa10.38□□□□□ -0.75
PCDHA11-201ENST00000398640 ATRXP46100 2492 aa10.38□□□□□ -0.75
PCDHA11-201ENST00000398640 IGLV2-11P01706 119 aa10.37□□□□□ -0.75
PCDHA11-201ENST00000398640 GAS8-AS1O95177 125 aa10.36□□□□□ -0.75
PCDHA11-201ENST00000398640 HIVEP3Q5T1R4 2406 aa10.36□□□□□ -0.75
PCDHA11-201ENST00000398640 NHLRC4P0CG21 123 aaPredicted RBP10.36□□□□□ -0.75
PCDHA11-201ENST00000398640 Q6ZQY7 126 aa10.36□□□□□ -0.75
PCDHA11-201ENST00000398640 M0R378 163 aa10.36□□□□□ -0.75
PCDHA11-201ENST00000398640 C11orf21Q9P2W6 132 aa10.36□□□□□ -0.75
PCDHA11-201ENST00000398640 CPAMD8Q8IZJ3 1885 aa10.36□□□□□ -0.75
PCDHA11-201ENST00000398640 MT-ATP8P03928 68 aa10.36□□□□□ -0.75
PCDHA11-201ENST00000398640 IGLV1-51P01701 117 aa10.35□□□□□ -0.75
PCDHA11-201ENST00000398640 MRGPRG-AS1Q2M3A8 158 aa10.35□□□□□ -0.75
PCDHA11-201ENST00000398640 LINC00474Q9P2X8 69 aa10.35□□□□□ -0.75
PCDHA11-201ENST00000398640 SRCAPQ6ZRS2 3230 aa10.35□□□□□ -0.75
PCDHA11-201ENST00000398640 TRBV27A0A0K0K1C4 114 aa10.35□□□□□ -0.75
PCDHA11-201ENST00000398640 PIEZO2Q9H5I5 2752 aa10.34□□□□□ -0.75
PCDHA11-201ENST00000398640 Q6ZTC4 211 aa10.34□□□□□ -0.75
PCDHA11-201ENST00000398640 SONP18583 2426 aaKnown RBP10.34□□□□□ -0.75
PCDHA11-201ENST00000398640 CIRBP-AS1Q8TBR5 109 aa10.34□□□□□ -0.75
PCDHA11-201ENST00000398640 FSHBP01225 129 aa10.34□□□□□ -0.75
PCDHA11-201ENST00000398640 CRIP2P52943 208 aaPredicted RBP10.33□□□□□ -0.76
PCDHA11-201ENST00000398640 KRTAP24-1Q3LI83 254 aa10.33□□□□□ -0.76
PCDHA11-201ENST00000398640 DHRS4-AS1Q9P1J3 65 aa10.33□□□□□ -0.76
PCDHA11-201ENST00000398640 NRACQ8N912 160 aa10.32□□□□□ -0.76
PCDHA11-201ENST00000398640 SORL1Q92673 2214 aa10.32□□□□□ -0.76
PCDHA11-201ENST00000398640 C1orf134Q5TEV5 83 aa10.32□□□□□ -0.76
PCDHA11-201ENST00000398640 ZNF580Q9UK33 172 aa10.32□□□□□ -0.76
PCDHA11-201ENST00000398640 PYGO1Q9Y3Y4 419 aa10.32□□□□□ -0.76
PCDHA11-201ENST00000398640 M0QXV9 152 aa10.31□□□□□ -0.76
PCDHA11-201ENST00000398640 NDUFV3P56181 108 aaKnown RBP10.31□□□□□ -0.76
PCDHA11-201ENST00000398640 SMIM11BQ8TCY0 68 aa10.31□□□□□ -0.76
PCDHA11-201ENST00000398640 KLLNB2CW77 178 aa10.31□□□□□ -0.76
PCDHA11-201ENST00000398640 PRR4Q16378 134 aa10.31□□□□□ -0.76
PCDHA11-201ENST00000398640 K7ERS5 55 aa10.31□□□□□ -0.76
PCDHA11-201ENST00000398640 CCDC168Q8NDH2 2452 aa10.3□□□□□ -0.76
PCDHA11-201ENST00000398640 TRBV30A0A0K0K1B3 111 aa10.3□□□□□ -0.76
PCDHA11-201ENST00000398640 SNURFQ9Y675 71 aa10.3□□□□□ -0.76
PCDHA11-201ENST00000398640 CYSRT1A8MQ03 144 aa10.3□□□□□ -0.76
PCDHA11-201ENST00000398640 MRPS12O15235 138 aaKnown RBP10.29□□□□□ -0.76
PCDHA11-201ENST00000398640 ODF3L2Q3SX64 289 aa10.29□□□□□ -0.76
PCDHA11-201ENST00000398640 FAM236DA0A1B0GTK5 79 aa10.29□□□□□ -0.76
PCDHA11-201ENST00000398640 FAM236CP0DP71 79 aa10.29□□□□□ -0.76
PCDHA11-201ENST00000398640 ZNF73O43830 326 aaPredicted RBP10.28□□□□□ -0.76
PCDHA11-201ENST00000398640 C9orf116Q5BN46 136 aaPredicted RBP10.28□□□□□ -0.76
PCDHA11-201ENST00000398640 FAM30AQ9NZY2 134 aa10.28□□□□□ -0.76
PCDHA11-201ENST00000398640 C6orf223Q8N319 242 aa10.27□□□□□ -0.76
PCDHA11-201ENST00000398640 NAV3Q8IVL0 2385 aa10.27□□□□□ -0.76
PCDHA11-201ENST00000398640 LINC01556Q5JQF7 62 aa10.27□□□□□ -0.77
PCDHA11-201ENST00000398640 RETNLBQ9BQ08 111 aa10.26□□□□□ -0.77
PCDHA11-201ENST00000398640 EXPH5Q8NEV8 1989 aa10.26□□□□□ -0.77
PCDHA11-201ENST00000398640 RPL28P46779 137 aaKnown RBP10.26□□□□□ -0.77
PCDHA11-201ENST00000398640 C1orf137Q5JT78 98 aa10.26□□□□□ -0.77
PCDHA11-201ENST00000398640 ATP5EP2Q5VTU8 51 aa10.26□□□□□ -0.77
PCDHA11-201ENST00000398640 YPEL4Q96NS1 127 aa10.26□□□□□ -0.77
PCDHA11-201ENST00000398640 CDC42SE2Q9NRR3 84 aa10.26□□□□□ -0.77
PCDHA11-201ENST00000398640 UNQ6190/PRO20217Q6UXQ8 127 aa10.26□□□□□ -0.77
PCDHA11-201ENST00000398640 GOLGB1Q14789 3259 aaKnown RBP10.25□□□□□ -0.77
PCDHA11-201ENST00000398640 TIMM17BO60830 172 aa10.25□□□□□ -0.77
PCDHA11-201ENST00000398640 POM121L12Q8N7R1 296 aa10.25□□□□□ -0.77
PCDHA11-201ENST00000398640 C10orf25Q5T742 122 aa10.25□□□□□ -0.77
PCDHA11-201ENST00000398640 Q8N2B8 174 aa10.25□□□□□ -0.77
PCDHA11-201ENST00000398640 MRPS36P82909 103 aaKnown RBP10.24□□□□□ -0.77
PCDHA11-201ENST00000398640 PRR15LQ9BU68 103 aa10.24□□□□□ -0.77
PCDHA11-201ENST00000398640 POLR2KP53803 58 aaKnown RBP10.23□□□□□ -0.77
PCDHA11-201ENST00000398640 COX17Q14061 63 aa10.23□□□□□ -0.77
PCDHA11-201ENST00000398640 UQCRQO14949 82 aa10.23□□□□□ -0.77
PCDHA11-201ENST00000398640 Q8IZM0 81 aa10.23□□□□□ -0.77
PCDHA11-201ENST00000398640 SERP1Q9Y6X1 66 aa10.22□□□□□ -0.77
PCDHA11-201ENST00000398640 ARHGAP32A7KAX9 2087 aa10.22□□□□□ -0.77
PCDHA11-201ENST00000398640 A0A0U1RQV1 116 aa10.21□□□□□ -0.77
PCDHA11-201ENST00000398640 Q8N9L7 120 aa10.21□□□□□ -0.77
PCDHA11-201ENST00000398640 PRR3P79522 188 aaKnown RBP10.21□□□□□ -0.77
PCDHA11-201ENST00000398640 COX6A2Q02221 97 aa10.21□□□□□ -0.78
PCDHA11-201ENST00000398640 FAM19A3Q7Z5A8 133 aa10.2□□□□□ -0.78
PCDHA11-201ENST00000398640 REG3GQ6UW15 175 aa10.2□□□□□ -0.78
PCDHA11-201ENST00000398640 TLN1Q9Y490 2541 aaKnown RBP10.2□□□□□ -0.78
PCDHA11-201ENST00000398640 Q6ZVQ6 151 aa10.2□□□□□ -0.78
PCDHA11-201ENST00000398640 IGLV4-60A0A075B6I1 120 aa10.19□□□□□ -0.78
PCDHA11-201ENST00000398640 CELA1Q9UNI1 258 aa10.19□□□□□ -0.78
PCDHA11-201ENST00000398640 NDUFC2-KCTD14E9PQ53 114 aa10.19□□□□□ -0.78
PCDHA11-201ENST00000398640 ESRGQ1W209 222 aa10.19□□□□□ -0.78
PCDHA11-201ENST00000398640 C2orf91Q6ZV80 131 aa10.19□□□□□ -0.78
PCDHA11-201ENST00000398640 X6R8D5 127 aa10.19□□□□□ -0.78
PCDHA11-201ENST00000398640 LST1O00453 97 aa10.18□□□□□ -0.78
PCDHA11-201ENST00000398640 LINC00242Q5T6M2 205 aa10.18□□□□□ -0.78
PCDHA11-201ENST00000398640 PLXNB1O43157 2135 aa10.18□□□□□ -0.78
PCDHA11-201ENST00000398640 TRBV10-3A0A0K0K1G6 114 aa10.18□□□□□ -0.78
PCDHA11-201ENST00000398640 LINC00694P0DN24 101 aa10.17□□□□□ -0.78
PCDHA11-201ENST00000398640 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.17□□□□□ -0.78
PCDHA11-201ENST00000398640 CNFNQ9BYD5 112 aa10.17□□□□□ -0.78
PCDHA11-201ENST00000398640 IGHV6-1A0A0B4J1U7 121 aa10.16□□□□□ -0.78
PCDHA11-201ENST00000398640 SPTBN4Q9H254 2564 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms