RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 HIST1H2BBP33778 126 aa10.24□□□□□ -0.77
CUX2-202ENST00000397643 HIST1H2BDP58876 126 aa10.24□□□□□ -0.77
CUX2-202ENST00000397643 HIST1H2BCP62807 126 aa10.24□□□□□ -0.77
CUX2-202ENST00000397643 RPL39P62891 51 aaKnown RBP10.24□□□□□ -0.77
CUX2-202ENST00000397643 HIST2H2BEQ16778 126 aa10.24□□□□□ -0.77
CUX2-202ENST00000397643 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.24□□□□□ -0.77
CUX2-202ENST00000397643 C2orf66Q6UXQ4 117 aa10.24□□□□□ -0.77
CUX2-202ENST00000397643 HIST1H2BHQ93079 126 aa10.24□□□□□ -0.77
CUX2-202ENST00000397643 URB1-AS1Q96HZ7 61 aa10.24□□□□□ -0.77
CUX2-202ENST00000397643 HIST1H2BNQ99877 126 aa10.24□□□□□ -0.77
CUX2-202ENST00000397643 HIST1H2BMQ99879 126 aa10.24□□□□□ -0.77
CUX2-202ENST00000397643 TIMM21Q9BVV7 248 aa10.24□□□□□ -0.77
CUX2-202ENST00000397643 MIAQ16674 131 aa10.23□□□□□ -0.77
CUX2-202ENST00000397643 SPANXA1Q9NS26 97 aa10.23□□□□□ -0.77
CUX2-202ENST00000397643 UBE2D4Q9Y2X8 147 aa10.23□□□□□ -0.77
CUX2-202ENST00000397643 CSDC2Q9Y534 153 aaKnown RBP10.23□□□□□ -0.77
CUX2-202ENST00000397643 IGLV4-60A0A075B6I1 120 aa10.22□□□□□ -0.77
CUX2-202ENST00000397643 ODF1Q14990 250 aa10.22□□□□□ -0.77
CUX2-202ENST00000397643 TOMM6Q96B49 74 aa10.22□□□□□ -0.77
CUX2-202ENST00000397643 PRR34Q9NV39 138 aa10.22□□□□□ -0.77
CUX2-202ENST00000397643 HSBP1O75506 76 aa10.21□□□□□ -0.77
CUX2-202ENST00000397643 PYGO1Q9Y3Y4 419 aa10.21□□□□□ -0.77
CUX2-202ENST00000397643 SERF1AO75920 110 aa10.2□□□□□ -0.78
CUX2-202ENST00000397643 HBDP02042 147 aa10.2□□□□□ -0.78
CUX2-202ENST00000397643 CNBPP62633 177 aaKnown RBP10.2□□□□□ -0.78
CUX2-202ENST00000397643 CLPSL2Q6UWE3 100 aa10.2□□□□□ -0.78
CUX2-202ENST00000397643 LINC00269Q8N2A0 174 aa10.2□□□□□ -0.78
CUX2-202ENST00000397643 ZNF664Q8N3J9 261 aa10.2□□□□□ -0.78
CUX2-202ENST00000397643 CDC42SE2Q9NRR3 84 aa10.2□□□□□ -0.78
CUX2-202ENST00000397643 NPSP0C0P6 89 aa10.19□□□□□ -0.78
CUX2-202ENST00000397643 MRPS36P82909 103 aaKnown RBP10.19□□□□□ -0.78
CUX2-202ENST00000397643 SCGB3A1Q96QR1 104 aa10.19□□□□□ -0.78
CUX2-202ENST00000397643 A0A087WYN8 130 aa10.18□□□□□ -0.78
CUX2-202ENST00000397643 CHTF8P0CG12 524 aa10.18□□□□□ -0.78
CUX2-202ENST00000397643 REG3AQ06141 175 aa10.18□□□□□ -0.78
CUX2-202ENST00000397643 PMCHL1Q16048 86 aa10.18□□□□□ -0.78
CUX2-202ENST00000397643 ERASQ7Z444 233 aa10.18□□□□□ -0.78
CUX2-202ENST00000397643 SPACA4Q8TDM5 124 aa10.18□□□□□ -0.78
CUX2-202ENST00000397643 TMEM141Q96I45 108 aa10.18□□□□□ -0.78
CUX2-202ENST00000397643 A0A096LNJ9 63 aa10.17□□□□□ -0.78
CUX2-202ENST00000397643 IGIPA6NJ69 53 aa10.17□□□□□ -0.78
CUX2-202ENST00000397643 SLPIP03973 132 aa10.17□□□□□ -0.78
CUX2-202ENST00000397643 NDUFA6P56556 154 aa10.17□□□□□ -0.78
CUX2-202ENST00000397643 PAPPA-AS1Q5QFB9 102 aa10.17□□□□□ -0.78
CUX2-202ENST00000397643 Q6ZN92 141 aa10.17□□□□□ -0.78
CUX2-202ENST00000397643 Q6ZUT4 128 aa10.17□□□□□ -0.78
CUX2-202ENST00000397643 LINC01600Q96MT4 127 aa10.17□□□□□ -0.78
CUX2-202ENST00000397643 TIMM17AQ99595 171 aa10.17□□□□□ -0.78
CUX2-202ENST00000397643 IGLV4-3A0A075B6K6 122 aa10.16□□□□□ -0.78
CUX2-202ENST00000397643 LINC00310P59036 64 aa10.16□□□□□ -0.78
CUX2-202ENST00000397643 OPRPNQ99935 248 aaPredicted RBP10.16□□□□□ -0.78
CUX2-202ENST00000397643 TRAV8-4A0A0B4J246 113 aa10.15□□□□□ -0.78
CUX2-202ENST00000397643 IGKV3OR2-268A0A0C4DH90 116 aa10.15□□□□□ -0.78
CUX2-202ENST00000397643 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.15□□□□□ -0.78
CUX2-202ENST00000397643 NUPR1O60356 82 aa10.15□□□□□ -0.78
CUX2-202ENST00000397643 PDZD11Q5EBL8 140 aa10.15□□□□□ -0.78
CUX2-202ENST00000397643 RNASE13Q5GAN3 156 aaKnown RBP10.15□□□□□ -0.78
CUX2-202ENST00000397643 COA6Q5JTJ3 125 aaKnown RBP10.15□□□□□ -0.78
CUX2-202ENST00000397643 FAM19A2Q8N3H0 131 aa10.15□□□□□ -0.78
CUX2-202ENST00000397643 VCX2Q9H322 139 aa10.15□□□□□ -0.78
CUX2-202ENST00000397643 PLAC8Q9NZF1 115 aa10.15□□□□□ -0.78
CUX2-202ENST00000397643 IGHV3-64A0A075B6Q5 118 aa10.14□□□□□ -0.79
CUX2-202ENST00000397643 hDV102S1A0JD36 115 aa10.14□□□□□ -0.79
CUX2-202ENST00000397643 ATP5LO75964 103 aa10.14□□□□□ -0.79
CUX2-202ENST00000397643 TEX43Q6ZNM6 134 aa10.14□□□□□ -0.79
CUX2-202ENST00000397643 IGLV10-54A0A075B6I4 117 aa10.13□□□□□ -0.79
CUX2-202ENST00000397643 IFITM10A6NMD0 228 aa10.13□□□□□ -0.79
CUX2-202ENST00000397643 SS18Q15532 418 aa10.13□□□□□ -0.79
CUX2-202ENST00000397643 FAM104AQ969W3 186 aa10.13□□□□□ -0.79
CUX2-202ENST00000397643 C2orf88Q9BSF0 95 aa10.13□□□□□ -0.79
CUX2-202ENST00000397643 LINC00959A0A1B0GUT2 108 aa10.12□□□□□ -0.79
CUX2-202ENST00000397643 CCL25O15444 150 aa10.12□□□□□ -0.79
CUX2-202ENST00000397643 S100A6P06703 90 aa10.12□□□□□ -0.79
CUX2-202ENST00000397643 TRAV13-1A0A0B4J241 112 aa10.11□□□□□ -0.79
CUX2-202ENST00000397643 LEPROTL1O95214 131 aa10.11□□□□□ -0.79
CUX2-202ENST00000397643 PRR3P79522 188 aaKnown RBP10.11□□□□□ -0.79
CUX2-202ENST00000397643 AMELXQ99217 191 aa10.11□□□□□ -0.79
CUX2-202ENST00000397643 HSPB8Q9UJY1 196 aa10.11□□□□□ -0.79
CUX2-202ENST00000397643 A0A0J9YXV3 536 aa10.1□□□□□ -0.79
CUX2-202ENST00000397643 KRTAP10-8P60410 259 aa10.1□□□□□ -0.79
CUX2-202ENST00000397643 FABP4P15090 132 aa10.09□□□□□ -0.79
CUX2-202ENST00000397643 PMVKQ15126 192 aa10.09□□□□□ -0.79
CUX2-202ENST00000397643 LINC00173Q6ZV60 143 aa10.09□□□□□ -0.79
CUX2-202ENST00000397643 C7orf33Q8WU49 177 aa10.09□□□□□ -0.79
CUX2-202ENST00000397643 CHCHD10Q8WYQ3 142 aaPredicted RBP10.09□□□□□ -0.79
CUX2-202ENST00000397643 IFI27L1Q96BM0 104 aa10.09□□□□□ -0.79
CUX2-202ENST00000397643 DPH3Q96FX2 82 aa10.09□□□□□ -0.79
CUX2-202ENST00000397643 LPAP08519 4548 aa10.09□□□□□ -0.79
CUX2-202ENST00000397643 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.08□□□□□ -0.8
CUX2-202ENST00000397643 ZC2HC1BQ5TFG8 222 aa10.08□□□□□ -0.8
CUX2-202ENST00000397643 PACRGQ96M98 296 aaPredicted RBP10.08□□□□□ -0.8
CUX2-202ENST00000397643 CST9LQ9H4G1 147 aa10.08□□□□□ -0.8
CUX2-202ENST00000397643 GAGE12HA6NDE8 117 aa10.07□□□□□ -0.8
CUX2-202ENST00000397643 XCL1P47992 114 aa10.07□□□□□ -0.8
CUX2-202ENST00000397643 UBE2D1P51668 147 aa10.07□□□□□ -0.8
CUX2-202ENST00000397643 SEC11AP67812 179 aa10.06□□□□□ -0.8
CUX2-202ENST00000397643 COX6A2Q02221 97 aa10.06□□□□□ -0.8
CUX2-202ENST00000397643 CD164L2Q6UWJ8 174 aa10.06□□□□□ -0.8
CUX2-202ENST00000397643 C15orf56Q8N910 161 aa10.06□□□□□ -0.8
CUX2-202ENST00000397643 S100A2P29034 98 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 161.6 ms