RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 FAM19A3Q7Z5A8 133 aa15.66■□□□□ 0.1
TSPAN4-203ENST00000397397 SEC11AP67812 179 aa15.65■□□□□ 0.1
TSPAN4-203ENST00000397397 COX6A2Q02221 97 aa15.65■□□□□ 0.1
TSPAN4-203ENST00000397397 CHTOPQ9Y3Y2 248 aaKnown RBP15.65■□□□□ 0.1
TSPAN4-203ENST00000397397 BIRC6Q9NR09 4857 aa15.65■□□□□ 0.1
TSPAN4-203ENST00000397397 GEMIN7Q9H840 131 aaKnown RBP15.64■□□□□ 0.09
TSPAN4-203ENST00000397397 HIST1H2BLQ99880 126 aa15.63■□□□□ 0.09
TSPAN4-203ENST00000397397 TINCRA0A1B0GVN0 87 aa15.62■□□□□ 0.09
TSPAN4-203ENST00000397397 HERVK_113P63121 156 aa15.62■□□□□ 0.09
TSPAN4-203ENST00000397397 C5orf38Q86SI9 138 aa15.62■□□□□ 0.09
TSPAN4-203ENST00000397397 DNAH17Q9UFH2 4485 aa15.62■□□□□ 0.09
TSPAN4-203ENST00000397397 IGHV3OR16-9A0A0B4J2B5 98 aa15.61■□□□□ 0.09
TSPAN4-203ENST00000397397 COX7A2LO14548 114 aa15.61■□□□□ 0.09
TSPAN4-203ENST00000397397 LECT2O14960 151 aa15.6■□□□□ 0.09
TSPAN4-203ENST00000397397 IGLC3P0DOY3 106 aa15.6■□□□□ 0.09
TSPAN4-203ENST00000397397 TNP2Q05952 138 aa15.6■□□□□ 0.09
TSPAN4-203ENST00000397397 IGLV4-69A0A075B6H9 119 aa15.6■□□□□ 0.09
TSPAN4-203ENST00000397397 SYS1-DBNDD2H3BUS1 97 aa15.6■□□□□ 0.09
TSPAN4-203ENST00000397397 C3orf79P0CE67 100 aa15.6■□□□□ 0.09
TSPAN4-203ENST00000397397 KRTDAPP60985 99 aa15.6■□□□□ 0.09
TSPAN4-203ENST00000397397 ODF1Q14990 250 aa15.6■□□□□ 0.09
TSPAN4-203ENST00000397397 CHAC1Q9BUX1 264 aa15.6■□□□□ 0.09
TSPAN4-203ENST00000397397 MRPL35Q9NZE8 188 aaKnown RBP15.6■□□□□ 0.09
TSPAN4-203ENST00000397397 LRCOL1A6NCL2 159 aa15.59■□□□□ 0.09
TSPAN4-203ENST00000397397 F8VRH5 84 aa15.59■□□□□ 0.09
TSPAN4-203ENST00000397397 MALP21145 153 aa15.59■□□□□ 0.09
TSPAN4-203ENST00000397397 LINC00336Q6ZUF6 198 aa15.59■□□□□ 0.09
TSPAN4-203ENST00000397397 USP17L23D6RBM5 183 aa15.58■□□□□ 0.08
TSPAN4-203ENST00000397397 WFDC2Q14508 124 aa15.58■□□□□ 0.08
TSPAN4-203ENST00000397397 LINC00469Q8N7U9 141 aa15.58■□□□□ 0.08
TSPAN4-203ENST00000397397 A0A087WTM6 91 aa15.57■□□□□ 0.08
TSPAN4-203ENST00000397397 CDKN2A-AS1Q9UH64 79 aa15.57■□□□□ 0.08
TSPAN4-203ENST00000397397 A0A087WZ39 114 aa15.56■□□□□ 0.08
TSPAN4-203ENST00000397397 C11orf86A6NJI1 115 aa15.56■□□□□ 0.08
TSPAN4-203ENST00000397397 CFAP161Q6P656 301 aa15.56■□□□□ 0.08
TSPAN4-203ENST00000397397 PET117Q6UWS5 81 aa15.56■□□□□ 0.08
TSPAN4-203ENST00000397397 SPATA12Q7Z6I5 190 aa15.56■□□□□ 0.08
TSPAN4-203ENST00000397397 PMCHL2Q9BQD1 86 aa15.55■□□□□ 0.08
TSPAN4-203ENST00000397397 IGLV5-45A0A087WSX0 123 aa15.54■□□□□ 0.08
TSPAN4-203ENST00000397397 IGHV1-58A0A0C4DH39 117 aa15.54■□□□□ 0.08
TSPAN4-203ENST00000397397 EREGO14944 169 aa15.53■□□□□ 0.08
TSPAN4-203ENST00000397397 ZNF22P17026 224 aaPredicted RBP15.53■□□□□ 0.08
TSPAN4-203ENST00000397397 C15orf56Q8N910 161 aa15.53■□□□□ 0.08
TSPAN4-203ENST00000397397 APOMO95445 188 aa15.52■□□□□ 0.08
TSPAN4-203ENST00000397397 TMEM170BQ5T4T1 132 aa15.52■□□□□ 0.08
TSPAN4-203ENST00000397397 LINC01561Q8N1V8 128 aa15.52■□□□□ 0.08
TSPAN4-203ENST00000397397 H3BRM9 83 aa15.51■□□□□ 0.07
TSPAN4-203ENST00000397397 DPM2O94777 84 aa15.51■□□□□ 0.07
TSPAN4-203ENST00000397397 C14orf177Q52M58 125 aa15.51■□□□□ 0.07
TSPAN4-203ENST00000397397 LINC01545Q5VT33 79 aa15.51■□□□□ 0.07
TSPAN4-203ENST00000397397 PLNP26678 52 aa15.51■□□□□ 0.07
TSPAN4-203ENST00000397397 HIGD2BQ4VC39 106 aa15.51■□□□□ 0.07
TSPAN4-203ENST00000397397 IGHV3-64A0A075B6Q5 118 aa15.5■□□□□ 0.07
TSPAN4-203ENST00000397397 IGKCP01834 107 aa15.5■□□□□ 0.07
TSPAN4-203ENST00000397397 Q8N814 137 aa15.5■□□□□ 0.07
TSPAN4-203ENST00000397397 ORAOV1Q8WV07 137 aa15.5■□□□□ 0.07
TSPAN4-203ENST00000397397 FAT2Q9NYQ8 4349 aa15.49■□□□□ 0.07
TSPAN4-203ENST00000397397 hDV102S1A0JD36 115 aa15.49■□□□□ 0.07
TSPAN4-203ENST00000397397 C20orf202A1L168 122 aa15.49■□□□□ 0.07
TSPAN4-203ENST00000397397 SPINK8P0C7L1 97 aa15.49■□□□□ 0.07
TSPAN4-203ENST00000397397 OR10D4PQ8NGN7 298 aa15.49■□□□□ 0.07
TSPAN4-203ENST00000397397 GVQW2A0A096LPI5 108 aaPredicted RBP15.48■□□□□ 0.07
TSPAN4-203ENST00000397397 SMIM1B2RUZ4 78 aa15.47■□□□□ 0.07
TSPAN4-203ENST00000397397 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.45■□□□□ 0.06
TSPAN4-203ENST00000397397 ZNF561-AS1K7EIQ3 104 aa15.45■□□□□ 0.06
TSPAN4-203ENST00000397397 SPAG11BQ08648 103 aa15.45■□□□□ 0.06
TSPAN4-203ENST00000397397 LINC00526Q96FQ7 95 aa15.44■□□□□ 0.06
TSPAN4-203ENST00000397397 HECTD4Q9Y4D8 3996 aa15.44■□□□□ 0.06
TSPAN4-203ENST00000397397 TMEM223A0PJW6 202 aa15.43■□□□□ 0.06
TSPAN4-203ENST00000397397 TOMM7Q9P0U1 55 aa15.43■□□□□ 0.06
TSPAN4-203ENST00000397397 PRSS2P07478 247 aa15.42■□□□□ 0.06
TSPAN4-203ENST00000397397 DNAH11Q96DT5 4516 aa15.41■□□□□ 0.06
TSPAN4-203ENST00000397397 IGLV5-39A0A0G2JS06 123 aa15.4■□□□□ 0.06
TSPAN4-203ENST00000397397 A0A1B0GVY2 172 aa15.39■□□□□ 0.05
TSPAN4-203ENST00000397397 SCGB1D1O95968 90 aa15.39■□□□□ 0.05
TSPAN4-203ENST00000397397 FUSP35637 526 aaKnown RBP eCLIP15.39■□□□□ 0.05
TSPAN4-203ENST00000397397 AKR1D1P51857 326 aa15.39■□□□□ 0.05
TSPAN4-203ENST00000397397 KIAA0087Q14695 138 aa15.39■□□□□ 0.05
TSPAN4-203ENST00000397397 Q8IZM0 81 aa15.39■□□□□ 0.05
TSPAN4-203ENST00000397397 COX7B2Q8TF08 81 aa15.39■□□□□ 0.05
TSPAN4-203ENST00000397397 KRTAP10-2P60368 255 aa15.38■□□□□ 0.05
TSPAN4-203ENST00000397397 HERVK_113P61574 105 aa15.38■□□□□ 0.05
TSPAN4-203ENST00000397397 C6orf226Q5I0X4 101 aa15.38■□□□□ 0.05
TSPAN4-203ENST00000397397 ATOH7Q8N100 152 aa15.38■□□□□ 0.05
TSPAN4-203ENST00000397397 NTN5Q8WTR8 489 aaPredicted RBP15.38■□□□□ 0.05
TSPAN4-203ENST00000397397 C2orf48Q96LS8 159 aa15.38■□□□□ 0.05
TSPAN4-203ENST00000397397 PKD1P98161 4303 aa15.37■□□□□ 0.05
TSPAN4-203ENST00000397397 SLPIP03973 132 aa15.37■□□□□ 0.05
TSPAN4-203ENST00000397397 CAMK2N2Q96S95 79 aa15.37■□□□□ 0.05
TSPAN4-203ENST00000397397 IGLV5-52A0A0A0MRZ9 124 aa15.35■□□□□ 0.05
TSPAN4-203ENST00000397397 CNBPP62633 177 aaKnown RBP15.35■□□□□ 0.05
TSPAN4-203ENST00000397397 PGPEP1Q9NXJ5 209 aa15.35■□□□□ 0.05
TSPAN4-203ENST00000397397 CKS1BP61024 79 aa15.34■□□□□ 0.05
TSPAN4-203ENST00000397397 SYCNQ0VAF6 134 aa15.34■□□□□ 0.05
TSPAN4-203ENST00000397397 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.34■□□□□ 0.05
TSPAN4-203ENST00000397397 F8WDY8 70 aa15.34■□□□□ 0.05
TSPAN4-203ENST00000397397 NDUFA1O15239 70 aa15.34■□□□□ 0.05
TSPAN4-203ENST00000397397 C2orf82Q6UX34 121 aa15.34■□□□□ 0.05
TSPAN4-203ENST00000397397 STPG4Q8N801 248 aa15.34■□□□□ 0.05
TSPAN4-203ENST00000397397 CARD19Q96LW7 228 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms