RNA–Protein interactions for RNA: ENST00000397381.4

UCA1-201, Transcript of urothelial cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene UCA1, Length 2,299 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-201ENST00000397381 TRAV25A0A0B4J276 109 aa6.59□□□□□ -1.35
UCA1-201ENST00000397381 CCL18P55774 89 aa6.59□□□□□ -1.35
UCA1-201ENST00000397381 STHQ8IWL8 128 aa6.59□□□□□ -1.35
UCA1-201ENST00000397381 C14orf132Q9NPU4 83 aa6.59□□□□□ -1.35
UCA1-201ENST00000397381 FSHBP01225 129 aa6.59□□□□□ -1.36
UCA1-201ENST00000397381 Q6ZTI0 123 aa6.59□□□□□ -1.36
UCA1-201ENST00000397381 SERP2Q8N6R1 65 aa6.59□□□□□ -1.36
UCA1-201ENST00000397381 LINC00846Q9NV44 126 aa6.58□□□□□ -1.36
UCA1-201ENST00000397381 TOMM7Q9P0U1 55 aa6.58□□□□□ -1.36
UCA1-201ENST00000397381 CREBBPQ92793 2442 aa6.58□□□□□ -1.36
UCA1-201ENST00000397381 hADV29S1A0JD25 119 aa6.57□□□□□ -1.36
UCA1-201ENST00000397381 TMEM258P61165 79 aa6.57□□□□□ -1.36
UCA1-201ENST00000397381 ODF3L2Q3SX64 289 aa6.57□□□□□ -1.36
UCA1-201ENST00000397381 CSPG4Q6UVK1 2322 aa6.57□□□□□ -1.36
UCA1-201ENST00000397381 IGKV3D-7A0A0C4DH55 119 aa6.57□□□□□ -1.36
UCA1-201ENST00000397381 LECT2O14960 151 aa6.57□□□□□ -1.36
UCA1-201ENST00000397381 C9orf129Q5T035 196 aaKnown RBP6.57□□□□□ -1.36
UCA1-201ENST00000397381 A0A096LNT2 108 aa6.56□□□□□ -1.36
UCA1-201ENST00000397381 LOC107984640A0A0U1RRK4 108 aa6.56□□□□□ -1.36
UCA1-201ENST00000397381 LY6G6DO95868 133 aa6.56□□□□□ -1.36
UCA1-201ENST00000397381 S100A7L2Q5SY68 101 aa6.56□□□□□ -1.36
UCA1-201ENST00000397381 ZFHX3Q15911 3703 aa6.56□□□□□ -1.36
UCA1-201ENST00000397381 CELSR1Q9NYQ6 3014 aa6.56□□□□□ -1.36
UCA1-201ENST00000397381 A0A087WZ39 114 aa6.56□□□□□ -1.36
UCA1-201ENST00000397381 IGHV3OR16-9A0A0B4J2B5 98 aa6.56□□□□□ -1.36
UCA1-201ENST00000397381 TRBV6-4A0A1B0GX49 114 aa6.56□□□□□ -1.36
UCA1-201ENST00000397381 ORMDL1Q9P0S3 153 aa6.56□□□□□ -1.36
UCA1-201ENST00000397381 PAX4O43316 350 aa6.55□□□□□ -1.36
UCA1-201ENST00000397381 CCKP06307 115 aa6.55□□□□□ -1.36
UCA1-201ENST00000397381 C5orf47Q569G3 176 aa6.55□□□□□ -1.36
UCA1-201ENST00000397381 FAM19A5Q7Z5A7 132 aaPredicted RBP6.55□□□□□ -1.36
UCA1-201ENST00000397381 OR13C6PQ8NH95 151 aa6.55□□□□□ -1.36
UCA1-201ENST00000397381 UPK3BQ9BT76 320 aa6.55□□□□□ -1.36
UCA1-201ENST00000397381 USP17L23D6RBM5 183 aa6.55□□□□□ -1.36
UCA1-201ENST00000397381 NCR3O14931 201 aa6.55□□□□□ -1.36
UCA1-201ENST00000397381 KHDC1LQ5JSQ8 128 aa6.55□□□□□ -1.36
UCA1-201ENST00000397381 ATP5EP2Q5VTU8 51 aa6.55□□□□□ -1.36
UCA1-201ENST00000397381 LINC00167Q96N53 147 aa6.55□□□□□ -1.36
UCA1-201ENST00000397381 NOP10Q9NPE3 64 aaKnown RBP6.55□□□□□ -1.36
UCA1-201ENST00000397381 LINC01561Q8N1V8 128 aa6.54□□□□□ -1.36
UCA1-201ENST00000397381 SMIM9A6NGZ8 99 aa6.53□□□□□ -1.36
UCA1-201ENST00000397381 JMJD7-PLA2G4BH0Y9G9 81 aa6.53□□□□□ -1.36
UCA1-201ENST00000397381 CMC4P56277 68 aaPredicted RBP6.53□□□□□ -1.36
UCA1-201ENST00000397381 C16orf74Q96GX8 76 aa6.53□□□□□ -1.36
UCA1-201ENST00000397381 TRBV6-8A0A0A6YYG3 113 aa6.53□□□□□ -1.36
UCA1-201ENST00000397381 PFN2P35080 140 aa6.53□□□□□ -1.36
UCA1-201ENST00000397381 TRGV2A0A075B6R0 118 aa6.52□□□□□ -1.37
UCA1-201ENST00000397381 IGKV3OR2-268A0A0C4DH90 116 aa6.52□□□□□ -1.37
UCA1-201ENST00000397381 IGLV4-60A0A075B6I1 120 aa6.52□□□□□ -1.37
UCA1-201ENST00000397381 A0A087WVE0 104 aa6.52□□□□□ -1.37
UCA1-201ENST00000397381 TRGV4A0A0C4DH28 118 aa6.52□□□□□ -1.37
UCA1-201ENST00000397381 LOC100131303A0A0U1RQF7 123 aa6.52□□□□□ -1.37
UCA1-201ENST00000397381 SLPIP03973 132 aa6.52□□□□□ -1.37
UCA1-201ENST00000397381 TMEM86BQ8N661 226 aa6.52□□□□□ -1.37
UCA1-201ENST00000397381 C11orf44Q8N8P7 122 aa6.52□□□□□ -1.37
UCA1-201ENST00000397381 DPH3Q96FX2 82 aa6.52□□□□□ -1.37
UCA1-201ENST00000397381 SS18Q15532 418 aa6.51□□□□□ -1.37
UCA1-201ENST00000397381 C6orf226Q5I0X4 101 aa6.51□□□□□ -1.37
UCA1-201ENST00000397381 CYSTM1Q9H1C7 97 aa6.51□□□□□ -1.37
UCA1-201ENST00000397381 PLAC8L1A1L4L8 177 aa6.51□□□□□ -1.37
UCA1-201ENST00000397381 IGHV4-31P0DP07 118 aa6.51□□□□□ -1.37
UCA1-201ENST00000397381 LINC00959A0A1B0GUT2 108 aa6.5□□□□□ -1.37
UCA1-201ENST00000397381 NDUFC2-KCTD14E9PQ53 114 aa6.5□□□□□ -1.37
UCA1-201ENST00000397381 TMEM256-PLSCR3K7ERE1 68 aa6.5□□□□□ -1.37
UCA1-201ENST00000397381 SPG11Q96JI7 2443 aa6.5□□□□□ -1.37
UCA1-201ENST00000397381 TRBV10-3A0A0K0K1G6 114 aa6.5□□□□□ -1.37
UCA1-201ENST00000397381 A0A1W2PRX2 142 aa6.5□□□□□ -1.37
UCA1-201ENST00000397381 Q8IZM0 81 aa6.5□□□□□ -1.37
UCA1-201ENST00000397381 MAPK1IP1LQ8NDC0 245 aa6.5□□□□□ -1.37
UCA1-201ENST00000397381 LYPD5Q6UWN5 251 aa6.49□□□□□ -1.37
UCA1-201ENST00000397381 Q8N814 137 aa6.49□□□□□ -1.37
UCA1-201ENST00000397381 NDUFC2O95298 119 aa6.48□□□□□ -1.37
UCA1-201ENST00000397381 GIG44P09565 113 aaPredicted RBP6.48□□□□□ -1.37
UCA1-201ENST00000397381 FHL2Q14192 279 aa6.48□□□□□ -1.37
UCA1-201ENST00000397381 KIR2DL5BQ8NHK3 375 aa6.48□□□□□ -1.37
UCA1-201ENST00000397381 CCL24O00175 119 aa6.47□□□□□ -1.37
UCA1-201ENST00000397381 GHRHP01286 108 aa6.47□□□□□ -1.37
UCA1-201ENST00000397381 NANOS2P60321 138 aaKnown RBP6.47□□□□□ -1.37
UCA1-201ENST00000397381 UBL5Q9BZL1 73 aa6.47□□□□□ -1.37
UCA1-201ENST00000397381 MAP1AP78559 2803 aaPredicted RBP6.46□□□□□ -1.37
UCA1-201ENST00000397381 BCE1O60756 84 aa6.46□□□□□ -1.37
UCA1-201ENST00000397381 COX17Q14061 63 aa6.46□□□□□ -1.37
UCA1-201ENST00000397381 C11orf68Q9H3H3 251 aaKnown RBP6.46□□□□□ -1.37
UCA1-201ENST00000397381 CRYBG3Q68DQ2 2970 aa6.46□□□□□ -1.38
UCA1-201ENST00000397381 DOPEY1Q5JWR5 2465 aa6.46□□□□□ -1.38
UCA1-201ENST00000397381 ITPR1Q14643 2758 aa6.46□□□□□ -1.38
UCA1-201ENST00000397381 A0A1B0GUV1 79 aa6.46□□□□□ -1.38
UCA1-201ENST00000397381 DSCR8Q96T75 97 aa6.46□□□□□ -1.38
UCA1-201ENST00000397381 VPS13CQ709C8 3753 aa6.45□□□□□ -1.38
UCA1-201ENST00000397381 WIPF1O43516 503 aa6.45□□□□□ -1.38
UCA1-201ENST00000397381 XCL1P47992 114 aa6.45□□□□□ -1.38
UCA1-201ENST00000397381 HILS1P60008 231 aa6.45□□□□□ -1.38
UCA1-201ENST00000397381 CSNK1G2-AS1Q8NCQ2 148 aa6.45□□□□□ -1.38
UCA1-201ENST00000397381 COL12A1Q99715 3063 aa6.45□□□□□ -1.38
UCA1-201ENST00000397381 CR1P17927 2039 aa6.44□□□□□ -1.38
UCA1-201ENST00000397381 CELSR2Q9HCU4 2923 aa6.44□□□□□ -1.38
UCA1-201ENST00000397381 TRAV23DV6A0A075B6W5 121 aa6.44□□□□□ -1.38
UCA1-201ENST00000397381 RPL35AP18077 110 aaKnown RBP6.44□□□□□ -1.38
UCA1-201ENST00000397381 ENHOQ6UWT2 76 aa6.44□□□□□ -1.38
UCA1-201ENST00000397381 NCOR2Q9Y618 2525 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms