RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 PSORS1C2Q9UIG4 136 aa5.37□□□□□ -1.55
CAPN3-208ENST00000397204 IGLV4-69A0A075B6H9 119 aa5.36□□□□□ -1.55
CAPN3-208ENST00000397204 A8MWL6 223 aa5.36□□□□□ -1.55
CAPN3-208ENST00000397204 LINC00587B1AMM8 73 aa5.36□□□□□ -1.55
CAPN3-208ENST00000397204 F8W036 122 aa5.36□□□□□ -1.55
CAPN3-208ENST00000397204 TSHBP01222 138 aa5.36□□□□□ -1.55
CAPN3-208ENST00000397204 MT-ND6P03923 174 aa5.36□□□□□ -1.55
CAPN3-208ENST00000397204 BCL2P10415 239 aa5.36□□□□□ -1.55
CAPN3-208ENST00000397204 MALP21145 153 aa5.36□□□□□ -1.55
CAPN3-208ENST00000397204 CEBPGP53567 150 aa5.36□□□□□ -1.55
CAPN3-208ENST00000397204 POLR2KP53803 58 aaKnown RBP5.36□□□□□ -1.55
CAPN3-208ENST00000397204 C2orf48Q96LS8 159 aa5.36□□□□□ -1.55
CAPN3-208ENST00000397204 TRBV27A0A0K0K1C4 114 aa5.35□□□□□ -1.55
CAPN3-208ENST00000397204 K7EN84 100 aa5.35□□□□□ -1.55
CAPN3-208ENST00000397204 COX7A2LO14548 114 aa5.35□□□□□ -1.55
CAPN3-208ENST00000397204 SMAGPQ0VAQ4 97 aa5.35□□□□□ -1.55
CAPN3-208ENST00000397204 NUP35Q8NFH5 326 aa5.35□□□□□ -1.55
CAPN3-208ENST00000397204 CSDC2Q9Y534 153 aaKnown RBP5.35□□□□□ -1.55
CAPN3-208ENST00000397204 VCYO14598 125 aa5.34□□□□□ -1.55
CAPN3-208ENST00000397204 APOMO95445 188 aa5.34□□□□□ -1.55
CAPN3-208ENST00000397204 C9orf116Q5BN46 136 aaPredicted RBP5.34□□□□□ -1.55
CAPN3-208ENST00000397204 FAM231DQ6ZW35 169 aa5.34□□□□□ -1.55
CAPN3-208ENST00000397204 DIRC1Q969H9 104 aa5.34□□□□□ -1.55
CAPN3-208ENST00000397204 CAMK2N2Q96S95 79 aa5.34□□□□□ -1.55
CAPN3-208ENST00000397204 TMEM242Q9NWH2 141 aa5.34□□□□□ -1.55
CAPN3-208ENST00000397204 C7orf77A4D0Y5 90 aa5.33□□□□□ -1.56
CAPN3-208ENST00000397204 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.33□□□□□ -1.56
CAPN3-208ENST00000397204 BLOC1S1P78537 153 aa5.33□□□□□ -1.56
CAPN3-208ENST00000397204 C1orf137Q5JT78 98 aa5.33□□□□□ -1.56
CAPN3-208ENST00000397204 TSKUQ8WUA8 353 aa5.33□□□□□ -1.56
CAPN3-208ENST00000397204 BORCS7Q96B45 105 aa5.33□□□□□ -1.56
CAPN3-208ENST00000397204 TMEM191AQ9H0A3 160 aa5.33□□□□□ -1.56
CAPN3-208ENST00000397204 MUC2Q02817 5179 aa5.33□□□□□ -1.56
CAPN3-208ENST00000397204 A0A1B0GUT8 65 aa5.32□□□□□ -1.56
CAPN3-208ENST00000397204 TMEM238C9JI98 176 aa5.32□□□□□ -1.56
CAPN3-208ENST00000397204 TMEM250H0YL14 139 aa5.32□□□□□ -1.56
CAPN3-208ENST00000397204 PPP1R17O96001 155 aa5.32□□□□□ -1.56
CAPN3-208ENST00000397204 PRR26Q8N8Z3 221 aa5.32□□□□□ -1.56
CAPN3-208ENST00000397204 IGLV7-43P04211 117 aa5.31□□□□□ -1.56
CAPN3-208ENST00000397204 FCER1GP30273 86 aa5.31□□□□□ -1.56
CAPN3-208ENST00000397204 RPL18AQ02543 176 aaKnown RBP5.31□□□□□ -1.56
CAPN3-208ENST00000397204 LBHQ53QV2 105 aaPredicted RBP5.31□□□□□ -1.56
CAPN3-208ENST00000397204 PHF5AQ7RTV0 110 aaKnown RBP5.31□□□□□ -1.56
CAPN3-208ENST00000397204 C5orf38Q86SI9 138 aa5.31□□□□□ -1.56
CAPN3-208ENST00000397204 IMMP2LQ96T52 175 aa5.31□□□□□ -1.56
CAPN3-208ENST00000397204 C12orf57Q99622 126 aa5.31□□□□□ -1.56
CAPN3-208ENST00000397204 IGLV1-50A0A075B6I6 118 aa5.3□□□□□ -1.56
CAPN3-208ENST00000397204 A0A087WZ39 114 aa5.3□□□□□ -1.56
CAPN3-208ENST00000397204 TRAV13-1A0A0B4J241 112 aa5.3□□□□□ -1.56
CAPN3-208ENST00000397204 TMEM241Q24JQ0 296 aa5.3□□□□□ -1.56
CAPN3-208ENST00000397204 OR10D4PQ8NGN7 298 aa5.3□□□□□ -1.56
CAPN3-208ENST00000397204 TMEM18Q96B42 140 aa5.3□□□□□ -1.56
CAPN3-208ENST00000397204 KIR2DL4Q99706 377 aa5.3□□□□□ -1.56
CAPN3-208ENST00000397204 OPRPNQ99935 248 aaPredicted RBP5.3□□□□□ -1.56
CAPN3-208ENST00000397204 ALKBH7Q9BT30 221 aaPredicted RBP5.3□□□□□ -1.56
CAPN3-208ENST00000397204 TIMM21Q9BVV7 248 aa5.3□□□□□ -1.56
CAPN3-208ENST00000397204 MRPL35Q9NZE8 188 aaKnown RBP5.3□□□□□ -1.56
CAPN3-208ENST00000397204 UBE2D4Q9Y2X8 147 aa5.3□□□□□ -1.56
CAPN3-208ENST00000397204 HIGD1CA8MV81 97 aa5.29□□□□□ -1.56
CAPN3-208ENST00000397204 H0Y9J4 135 aa5.29□□□□□ -1.56
CAPN3-208ENST00000397204 PPP1R2P9O14990 202 aa5.28□□□□□ -1.56
CAPN3-208ENST00000397204 LINC00614P0C842 121 aa5.28□□□□□ -1.56
CAPN3-208ENST00000397204 TLX1NBP0CAT3 122 aa5.28□□□□□ -1.56
CAPN3-208ENST00000397204 SUMO2P61956 95 aaKnown RBP5.28□□□□□ -1.56
CAPN3-208ENST00000397204 SPAG11BQ08648 103 aa5.28□□□□□ -1.56
CAPN3-208ENST00000397204 RNASE13Q5GAN3 156 aaKnown RBP5.28□□□□□ -1.56
CAPN3-208ENST00000397204 AMN1Q8IY45 258 aa5.28□□□□□ -1.56
CAPN3-208ENST00000397204 PACRGQ96M98 296 aaPredicted RBP5.28□□□□□ -1.56
CAPN3-208ENST00000397204 OSTCQ9NRP0 149 aa5.28□□□□□ -1.56
CAPN3-208ENST00000397204 IGHV3OR16-9A0A0B4J2B5 98 aa5.27□□□□□ -1.57
CAPN3-208ENST00000397204 SMKR1H3BMG3 65 aa5.27□□□□□ -1.57
CAPN3-208ENST00000397204 NDUFA1O15239 70 aa5.27□□□□□ -1.57
CAPN3-208ENST00000397204 TCAPO15273 167 aa5.27□□□□□ -1.57
CAPN3-208ENST00000397204 S100PP25815 95 aa5.27□□□□□ -1.57
CAPN3-208ENST00000397204 RIGQ13278 110 aa5.27□□□□□ -1.57
CAPN3-208ENST00000397204 NRACQ8N912 160 aa5.27□□□□□ -1.57
CAPN3-208ENST00000397204 ORAOV1Q8WV07 137 aa5.27□□□□□ -1.57
CAPN3-208ENST00000397204 C20orf78Q9BR46 151 aa5.27□□□□□ -1.57
CAPN3-208ENST00000397204 GEMIN7Q9H840 131 aaKnown RBP5.27□□□□□ -1.57
CAPN3-208ENST00000397204 TRBV24-1A0A075B6N3 115 aa5.26□□□□□ -1.57
CAPN3-208ENST00000397204 A0A0U1RQV1 116 aa5.26□□□□□ -1.57
CAPN3-208ENST00000397204 LINC00862A6NCI5 91 aa5.26□□□□□ -1.57
CAPN3-208ENST00000397204 KRTAP1-4P0C5Y4 121 aa5.26□□□□□ -1.57
CAPN3-208ENST00000397204 RPL13AP40429 203 aaKnown RBP5.26□□□□□ -1.57
CAPN3-208ENST00000397204 RPL32P62910 135 aaKnown RBP5.26□□□□□ -1.57
CAPN3-208ENST00000397204 Q6ZUT4 128 aa5.26□□□□□ -1.57
CAPN3-208ENST00000397204 LINC01551Q86U37 167 aa5.26□□□□□ -1.57
CAPN3-208ENST00000397204 KRTAP11-1Q8IUC1 163 aa5.26□□□□□ -1.57
CAPN3-208ENST00000397204 TCTE3Q8IZS6 198 aa5.26□□□□□ -1.57
CAPN3-208ENST00000397204 SMIM7Q9BQ49 75 aa5.26□□□□□ -1.57
CAPN3-208ENST00000397204 FAM168BA1KXE4 195 aa5.25□□□□□ -1.57
CAPN3-208ENST00000397204 MRPS36P82909 103 aaKnown RBP5.25□□□□□ -1.57
CAPN3-208ENST00000397204 PRR4Q16378 134 aa5.25□□□□□ -1.57
CAPN3-208ENST00000397204 C10orf25Q5T742 122 aa5.25□□□□□ -1.57
CAPN3-208ENST00000397204 FAM104BQ5XKR9 115 aa5.25□□□□□ -1.57
CAPN3-208ENST00000397204 UNQ6190/PRO20217Q6UXQ8 127 aa5.25□□□□□ -1.57
CAPN3-208ENST00000397204 FAM104AQ969W3 186 aa5.25□□□□□ -1.57
CAPN3-208ENST00000397204 CARHSP1Q9Y2V2 147 aaKnown RBP5.25□□□□□ -1.57
CAPN3-208ENST00000397204 A0A1B0GV90 55 aa5.24□□□□□ -1.57
CAPN3-208ENST00000397204 UBE2D1P51668 147 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms