RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 MRPS36P82909 103 aaKnown RBP10.4□□□□□ -0.75
TM9SF1-202ENST00000396854 Q6ZTC4 211 aa10.4□□□□□ -0.75
TM9SF1-202ENST00000396854 TNFRSF18Q9Y5U5 241 aa10.4□□□□□ -0.75
TM9SF1-202ENST00000396854 TRGV4A0A0C4DH28 118 aa10.39□□□□□ -0.75
TM9SF1-202ENST00000396854 SIGMAR1Q99720 223 aa10.39□□□□□ -0.75
TM9SF1-202ENST00000396854 TRBV6-4A0A1B0GX49 114 aa10.38□□□□□ -0.75
TM9SF1-202ENST00000396854 TMEM238C9JI98 176 aa10.38□□□□□ -0.75
TM9SF1-202ENST00000396854 SCGB1A1P11684 91 aa10.38□□□□□ -0.75
TM9SF1-202ENST00000396854 SFTA2Q6UW10 78 aa10.38□□□□□ -0.75
TM9SF1-202ENST00000396854 STAB2Q8WWQ8 2551 aa10.38□□□□□ -0.75
TM9SF1-202ENST00000396854 IGHV3-64A0A075B6Q5 118 aa10.37□□□□□ -0.75
TM9SF1-202ENST00000396854 A0A0B4J2C4 111 aa10.37□□□□□ -0.75
TM9SF1-202ENST00000396854 A4D1N5 150 aa10.37□□□□□ -0.75
TM9SF1-202ENST00000396854 K7EQD1 137 aa10.37□□□□□ -0.75
TM9SF1-202ENST00000396854 TCL1BO95988 128 aa10.37□□□□□ -0.75
TM9SF1-202ENST00000396854 FOXI1Q12951 378 aa10.37□□□□□ -0.75
TM9SF1-202ENST00000396854 CHCHD7Q9BUK0 85 aa10.37□□□□□ -0.75
TM9SF1-202ENST00000396854 SPANXA1Q9NS26 97 aa10.37□□□□□ -0.75
TM9SF1-202ENST00000396854 PRO0255Q9UI72 69 aa10.37□□□□□ -0.75
TM9SF1-202ENST00000396854 A0A0J9YXY3 114 aa10.36□□□□□ -0.75
TM9SF1-202ENST00000396854 TRBV10-1A0A0K0K1A3 114 aa10.36□□□□□ -0.75
TM9SF1-202ENST00000396854 IGHV3-30-3P0DP02 117 aa10.36□□□□□ -0.75
TM9SF1-202ENST00000396854 TIMM21Q9BVV7 248 aa10.36□□□□□ -0.75
TM9SF1-202ENST00000396854 F5H768 121 aa10.35□□□□□ -0.75
TM9SF1-202ENST00000396854 EIF4EBP3O60516 100 aaPredicted RBP10.35□□□□□ -0.75
TM9SF1-202ENST00000396854 IGHV3-33P01772 117 aa10.35□□□□□ -0.75
TM9SF1-202ENST00000396854 GTSF1LQ9H1H1 148 aa10.35□□□□□ -0.75
TM9SF1-202ENST00000396854 UBE2D4Q9Y2X8 147 aa10.35□□□□□ -0.75
TM9SF1-202ENST00000396854 TRAV10A0A0B4J240 114 aa10.35□□□□□ -0.75
TM9SF1-202ENST00000396854 TINCRA0A1B0GVN0 87 aa10.35□□□□□ -0.75
TM9SF1-202ENST00000396854 HTN3P15516 51 aa10.35□□□□□ -0.75
TM9SF1-202ENST00000396854 MUSTN1Q8IVN3 82 aa10.35□□□□□ -0.75
TM9SF1-202ENST00000396854 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.34□□□□□ -0.75
TM9SF1-202ENST00000396854 CEMP1Q6PRD7 247 aaPredicted RBP10.34□□□□□ -0.75
TM9SF1-202ENST00000396854 Q9UF83 564 aa10.34□□□□□ -0.75
TM9SF1-202ENST00000396854 DEFB131BA0A096LNP1 70 aa10.34□□□□□ -0.75
TM9SF1-202ENST00000396854 IGHV1-58A0A0C4DH39 117 aa10.34□□□□□ -0.75
TM9SF1-202ENST00000396854 LITAFQ99732 161 aa10.34□□□□□ -0.75
TM9SF1-202ENST00000396854 TEN1Q86WV5 123 aa10.33□□□□□ -0.76
TM9SF1-202ENST00000396854 VSIG2Q96IQ7 327 aa10.33□□□□□ -0.76
TM9SF1-202ENST00000396854 TRAV26-1A0A087WT03 109 aa10.32□□□□□ -0.76
TM9SF1-202ENST00000396854 PAX4O43316 350 aa10.32□□□□□ -0.76
TM9SF1-202ENST00000396854 ERG28Q9UKR5 140 aa10.32□□□□□ -0.76
TM9SF1-202ENST00000396854 H3BNG1 76 aa10.32□□□□□ -0.76
TM9SF1-202ENST00000396854 SCGB1C2P0DMR2 95 aa10.32□□□□□ -0.76
TM9SF1-202ENST00000396854 LINC00694P0DN24 101 aa10.32□□□□□ -0.76
TM9SF1-202ENST00000396854 PPDPFLQ8WWR9 84 aa10.32□□□□□ -0.76
TM9SF1-202ENST00000396854 TRAV8-3A0A0A6YYJ7 113 aa10.31□□□□□ -0.76
TM9SF1-202ENST00000396854 M0QXV9 152 aa10.31□□□□□ -0.76
TM9SF1-202ENST00000396854 RPL36AP83881 106 aaKnown RBP10.31□□□□□ -0.76
TM9SF1-202ENST00000396854 RNASE13Q5GAN3 156 aaKnown RBP10.31□□□□□ -0.76
TM9SF1-202ENST00000396854 RPL36ALQ969Q0 106 aaKnown RBP10.31□□□□□ -0.76
TM9SF1-202ENST00000396854 SPANXDQ9BXN6 97 aa10.31□□□□□ -0.76
TM9SF1-202ENST00000396854 SPANXCQ9NY87 97 aa10.31□□□□□ -0.76
TM9SF1-202ENST00000396854 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.3□□□□□ -0.76
TM9SF1-202ENST00000396854 LOC100131303A0A0U1RQF7 123 aa10.3□□□□□ -0.76
TM9SF1-202ENST00000396854 IGKV2-29A2NJV5 120 aaPredicted RBP10.3□□□□□ -0.76
TM9SF1-202ENST00000396854 GYPEP15421 78 aa10.3□□□□□ -0.76
TM9SF1-202ENST00000396854 SMAGPQ0VAQ4 97 aa10.3□□□□□ -0.76
TM9SF1-202ENST00000396854 Q6ZUT4 128 aa10.3□□□□□ -0.76
TM9SF1-202ENST00000396854 DNAH7Q8WXX0 4024 aa10.3□□□□□ -0.76
TM9SF1-202ENST00000396854 CARD19Q96LW7 228 aa10.3□□□□□ -0.76
TM9SF1-202ENST00000396854 NDUFA12Q9UI09 145 aa10.3□□□□□ -0.76
TM9SF1-202ENST00000396854 GAGE12JA6NER3 117 aa10.29□□□□□ -0.76
TM9SF1-202ENST00000396854 GAGE4Q13068 117 aa10.29□□□□□ -0.76
TM9SF1-202ENST00000396854 GAGE5Q13069 117 aa10.29□□□□□ -0.76
TM9SF1-202ENST00000396854 ZFAND6Q6FIF0 208 aa10.28□□□□□ -0.76
TM9SF1-202ENST00000396854 DAZ4Q86SG3 579 aaKnown RBP10.28□□□□□ -0.76
TM9SF1-202ENST00000396854 CDIP1Q9H305 208 aa10.28□□□□□ -0.76
TM9SF1-202ENST00000396854 DAZ3Q9NR90 486 aaKnown RBP10.28□□□□□ -0.76
TM9SF1-202ENST00000396854 IGLV5-45A0A087WSX0 123 aa10.27□□□□□ -0.76
TM9SF1-202ENST00000396854 IGHV3-38A0A0C4DH36 116 aa10.27□□□□□ -0.76
TM9SF1-202ENST00000396854 SPINK8P0C7L1 97 aa10.27□□□□□ -0.76
TM9SF1-202ENST00000396854 TIRAPP58753 221 aa10.27□□□□□ -0.76
TM9SF1-202ENST00000396854 MIAQ16674 131 aa10.27□□□□□ -0.76
TM9SF1-202ENST00000396854 TRBV30A0A0K0K1B3 111 aa10.27□□□□□ -0.77
TM9SF1-202ENST00000396854 TIMM17BO60830 172 aa10.27□□□□□ -0.77
TM9SF1-202ENST00000396854 ANKRD29Q8N6D5 301 aa10.27□□□□□ -0.77
TM9SF1-202ENST00000396854 GEMIN7Q9H840 131 aaKnown RBP10.27□□□□□ -0.77
TM9SF1-202ENST00000396854 ICOSQ9Y6W8 199 aa10.27□□□□□ -0.77
TM9SF1-202ENST00000396854 A0A096LPF7 62 aa10.26□□□□□ -0.77
TM9SF1-202ENST00000396854 SLC25A20O43772 301 aa10.26□□□□□ -0.77
TM9SF1-202ENST00000396854 MRPL23Q16540 153 aaKnown RBP10.26□□□□□ -0.77
TM9SF1-202ENST00000396854 ADAMTSL4-AS1Q5T5F5 129 aa10.26□□□□□ -0.77
TM9SF1-202ENST00000396854 H7C2G1 150 aa10.26□□□□□ -0.77
TM9SF1-202ENST00000396854 Q1RN00 199 aa10.26□□□□□ -0.77
TM9SF1-202ENST00000396854 TGP01266 2768 aa10.25□□□□□ -0.77
TM9SF1-202ENST00000396854 ATXN8Q156A1 80 aa10.25□□□□□ -0.77
TM9SF1-202ENST00000396854 C15orf53Q8NAA6 179 aa10.25□□□□□ -0.77
TM9SF1-202ENST00000396854 LINC01600Q96MT4 127 aa10.25□□□□□ -0.77
TM9SF1-202ENST00000396854 DYNC2H1Q8NCM8 4307 aaKnown RBP10.25□□□□□ -0.77
TM9SF1-202ENST00000396854 NUPR2A6NF83 97 aa10.24□□□□□ -0.77
TM9SF1-202ENST00000396854 C9JAW5 83 aa10.24□□□□□ -0.77
TM9SF1-202ENST00000396854 NDUFA1O15239 70 aa10.24□□□□□ -0.77
TM9SF1-202ENST00000396854 PRSS2P07478 247 aa10.24□□□□□ -0.77
TM9SF1-202ENST00000396854 WWC2-AS2Q96NR7 200 aa10.24□□□□□ -0.77
TM9SF1-202ENST00000396854 CDKN2A-AS1Q9UH64 79 aa10.24□□□□□ -0.77
TM9SF1-202ENST00000396854 CSMD3Q7Z407 3707 aa10.24□□□□□ -0.77
TM9SF1-202ENST00000396854 TRIAP1O43715 76 aa10.23□□□□□ -0.77
TM9SF1-202ENST00000396854 FAM19A3Q7Z5A8 133 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms