RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 LINC00173Q6ZV60 143 aa6.89□□□□□ -1.31
NEDD8-202ENST00000396828 VCX2Q9H322 139 aa6.89□□□□□ -1.31
NEDD8-202ENST00000396828 FAM30AQ9NZY2 134 aa6.89□□□□□ -1.31
NEDD8-202ENST00000396828 LRP1Q07954 4544 aaKnown RBP6.89□□□□□ -1.31
NEDD8-202ENST00000396828 IGLV4-3A0A075B6K6 122 aa6.88□□□□□ -1.31
NEDD8-202ENST00000396828 A0A1B0GUV1 79 aa6.88□□□□□ -1.31
NEDD8-202ENST00000396828 C20orf202A1L168 122 aa6.88□□□□□ -1.31
NEDD8-202ENST00000396828 SYS1-DBNDD2H3BUS1 97 aa6.88□□□□□ -1.31
NEDD8-202ENST00000396828 PMVKQ15126 192 aa6.88□□□□□ -1.31
NEDD8-202ENST00000396828 PET117Q6UWS5 81 aa6.88□□□□□ -1.31
NEDD8-202ENST00000396828 TEX43Q6ZNM6 134 aa6.88□□□□□ -1.31
NEDD8-202ENST00000396828 ZNF664Q8N3J9 261 aa6.88□□□□□ -1.31
NEDD8-202ENST00000396828 BAALCQ8WXS3 180 aa6.88□□□□□ -1.31
NEDD8-202ENST00000396828 C2orf88Q9BSF0 95 aa6.88□□□□□ -1.31
NEDD8-202ENST00000396828 RBX1P62877 108 aa6.87□□□□□ -1.31
NEDD8-202ENST00000396828 MPV17L2Q567V2 206 aa6.87□□□□□ -1.31
NEDD8-202ENST00000396828 Q8N3U1 123 aa6.87□□□□□ -1.31
NEDD8-202ENST00000396828 OPRPNQ99935 248 aaPredicted RBP6.87□□□□□ -1.31
NEDD8-202ENST00000396828 IGLV5-52A0A0A0MRZ9 124 aa6.86□□□□□ -1.31
NEDD8-202ENST00000396828 TRAV12-1A0A0B4J245 112 aa6.86□□□□□ -1.31
NEDD8-202ENST00000396828 K7EP13 123 aa6.86□□□□□ -1.31
NEDD8-202ENST00000396828 SCGB1D1O95968 90 aa6.86□□□□□ -1.31
NEDD8-202ENST00000396828 WFDC2Q14508 124 aa6.86□□□□□ -1.31
NEDD8-202ENST00000396828 Q6ZUT4 128 aa6.86□□□□□ -1.31
NEDD8-202ENST00000396828 Q8N976 141 aa6.86□□□□□ -1.31
NEDD8-202ENST00000396828 CST9LQ9H4G1 147 aa6.86□□□□□ -1.31
NEDD8-202ENST00000396828 Q9HAA7 133 aa6.86□□□□□ -1.31
NEDD8-202ENST00000396828 CDC42SE2Q9NRR3 84 aa6.86□□□□□ -1.31
NEDD8-202ENST00000396828 IBA57-AS1B1ANH7 110 aa6.85□□□□□ -1.31
NEDD8-202ENST00000396828 IGHV3-30P01768 117 aa6.85□□□□□ -1.31
NEDD8-202ENST00000396828 IGHV3-33P01772 117 aa6.85□□□□□ -1.31
NEDD8-202ENST00000396828 ANGP03950 147 aaKnown RBP6.85□□□□□ -1.31
NEDD8-202ENST00000396828 IGHV3-30-3P0DP02 117 aa6.85□□□□□ -1.31
NEDD8-202ENST00000396828 IGHV3-30-5P0DP03 117 aa6.85□□□□□ -1.31
NEDD8-202ENST00000396828 RNASE13Q5GAN3 156 aaKnown RBP6.85□□□□□ -1.31
NEDD8-202ENST00000396828 LINC01556Q5JQF7 62 aa6.85□□□□□ -1.31
NEDD8-202ENST00000396828 Q8N814 137 aa6.85□□□□□ -1.31
NEDD8-202ENST00000396828 AMELXQ99217 191 aa6.85□□□□□ -1.31
NEDD8-202ENST00000396828 CHTOPQ9Y3Y2 248 aaKnown RBP6.85□□□□□ -1.31
NEDD8-202ENST00000396828 FAT3Q8TDW7 4589 aa6.85□□□□□ -1.31
NEDD8-202ENST00000396828 IGLV4-60A0A075B6I1 120 aa6.84□□□□□ -1.31
NEDD8-202ENST00000396828 ODF1Q14990 250 aa6.84□□□□□ -1.31
NEDD8-202ENST00000396828 JOSD1Q15040 202 aaPredicted RBP6.84□□□□□ -1.31
NEDD8-202ENST00000396828 LINC01545Q5VT33 79 aa6.84□□□□□ -1.31
NEDD8-202ENST00000396828 C10orf126Q8N4M7 172 aa6.84□□□□□ -1.31
NEDD8-202ENST00000396828 F8VRH5 84 aa6.83□□□□□ -1.32
NEDD8-202ENST00000396828 PSCAO43653 123 aa6.83□□□□□ -1.32
NEDD8-202ENST00000396828 PLNP26678 52 aa6.83□□□□□ -1.32
NEDD8-202ENST00000396828 SEC11AP67812 179 aa6.83□□□□□ -1.32
NEDD8-202ENST00000396828 LINC00269Q8N2A0 174 aa6.83□□□□□ -1.32
NEDD8-202ENST00000396828 FAM104AQ969W3 186 aa6.83□□□□□ -1.32
NEDD8-202ENST00000396828 TRAV13-1A0A0B4J241 112 aa6.82□□□□□ -1.32
NEDD8-202ENST00000396828 IGKV3OR2-268A0A0C4DH90 116 aa6.82□□□□□ -1.32
NEDD8-202ENST00000396828 FAM229AH3BQW9 127 aa6.82□□□□□ -1.32
NEDD8-202ENST00000396828 CCL25O15444 150 aa6.82□□□□□ -1.32
NEDD8-202ENST00000396828 DPM2O94777 84 aa6.82□□□□□ -1.32
NEDD8-202ENST00000396828 CRPP02741 224 aa6.82□□□□□ -1.32
NEDD8-202ENST00000396828 REG3AQ06141 175 aa6.82□□□□□ -1.32
NEDD8-202ENST00000396828 SS18Q15532 418 aa6.82□□□□□ -1.32
NEDD8-202ENST00000396828 ZC2HC1BQ5TFG8 222 aa6.82□□□□□ -1.32
NEDD8-202ENST00000396828 MRPL35Q9NZE8 188 aaKnown RBP6.82□□□□□ -1.32
NEDD8-202ENST00000396828 KLK12Q9UKR0 248 aa6.82□□□□□ -1.32
NEDD8-202ENST00000396828 PKHD1L1Q86WI1 4243 aa6.82□□□□□ -1.32
NEDD8-202ENST00000396828 LECT2O14960 151 aa6.81□□□□□ -1.32
NEDD8-202ENST00000396828 IGKCP01834 107 aa6.81□□□□□ -1.32
NEDD8-202ENST00000396828 SMIM6P0DI80 62 aa6.81□□□□□ -1.32
NEDD8-202ENST00000396828 UBE2D1P51668 147 aa6.81□□□□□ -1.32
NEDD8-202ENST00000396828 PYY3Q5JQD4 70 aa6.81□□□□□ -1.32
NEDD8-202ENST00000396828 NTN5Q8WTR8 489 aaPredicted RBP6.81□□□□□ -1.32
NEDD8-202ENST00000396828 PMCHL2Q9BQD1 86 aa6.81□□□□□ -1.32
NEDD8-202ENST00000396828 GEMIN7Q9H840 131 aaKnown RBP6.81□□□□□ -1.32
NEDD8-202ENST00000396828 LINC00959A0A1B0GUT2 108 aa6.8□□□□□ -1.32
NEDD8-202ENST00000396828 TINCRA0A1B0GVN0 87 aa6.8□□□□□ -1.32
NEDD8-202ENST00000396828 IGLC3P0DOY3 106 aa6.8□□□□□ -1.32
NEDD8-202ENST00000396828 HERVK_113P63121 156 aa6.8□□□□□ -1.32
NEDD8-202ENST00000396828 LINC01620Q4KN68 170 aa6.8□□□□□ -1.32
NEDD8-202ENST00000396828 CLPSL2Q6UWE3 100 aa6.8□□□□□ -1.32
NEDD8-202ENST00000396828 CHAC1Q9BUX1 264 aa6.8□□□□□ -1.32
NEDD8-202ENST00000396828 IGLV4-69A0A075B6H9 119 aa6.79□□□□□ -1.32
NEDD8-202ENST00000396828 TRAV8-4A0A0B4J246 113 aa6.79□□□□□ -1.32
NEDD8-202ENST00000396828 A0A0J9YXV3 536 aa6.79□□□□□ -1.32
NEDD8-202ENST00000396828 HSBP1L1C9JCN9 74 aa6.79□□□□□ -1.32
NEDD8-202ENST00000396828 MIAQ16674 131 aa6.79□□□□□ -1.32
NEDD8-202ENST00000396828 LINC00242Q5T6M2 205 aa6.79□□□□□ -1.32
NEDD8-202ENST00000396828 FAM19A3Q7Z5A8 133 aa6.79□□□□□ -1.32
NEDD8-202ENST00000396828 ATOH7Q8N100 152 aa6.79□□□□□ -1.32
NEDD8-202ENST00000396828 UBE2WQ96B02 151 aa6.79□□□□□ -1.32
NEDD8-202ENST00000396828 PRR34Q9NV39 138 aa6.79□□□□□ -1.32
NEDD8-202ENST00000396828 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.78□□□□□ -1.32
NEDD8-202ENST00000396828 H3BRM9 83 aa6.78□□□□□ -1.32
NEDD8-202ENST00000396828 S100A12P80511 92 aa6.78□□□□□ -1.32
NEDD8-202ENST00000396828 TMEM170BQ5T4T1 132 aa6.78□□□□□ -1.32
NEDD8-202ENST00000396828 LCE2CQ5TA81 110 aa6.78□□□□□ -1.32
NEDD8-202ENST00000396828 Q6ZSA8 131 aa6.78□□□□□ -1.32
NEDD8-202ENST00000396828 HMCN2Q8NDA2 5059 aa6.77□□□□□ -1.33
NEDD8-202ENST00000396828 TRAV8-3A0A0A6YYJ7 113 aa6.77□□□□□ -1.33
NEDD8-202ENST00000396828 C11orf86A6NJI1 115 aa6.77□□□□□ -1.33
NEDD8-202ENST00000396828 XCL1P47992 114 aa6.77□□□□□ -1.33
NEDD8-202ENST00000396828 HERVK_113P61574 105 aa6.77□□□□□ -1.33
NEDD8-202ENST00000396828 ENHOQ6UWT2 76 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms