RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 LINC00315P59091 139 aa2.48□□□□□ -2.01
XRCC4-203ENST00000396027 CNBPP62633 177 aaKnown RBP2.48□□□□□ -2.01
XRCC4-203ENST00000396027 BSPH1Q075Z2 132 aa2.48□□□□□ -2.01
XRCC4-203ENST00000396027 HIGD2BQ4VC39 106 aa2.48□□□□□ -2.01
XRCC4-203ENST00000396027 SUMO4Q6EEV6 95 aa2.48□□□□□ -2.01
XRCC4-203ENST00000396027 LINC00337Q8N6G1 96 aa2.48□□□□□ -2.01
XRCC4-203ENST00000396027 WFDC9Q8NEX5 89 aa2.48□□□□□ -2.01
XRCC4-203ENST00000396027 PRR15LQ9BU68 103 aa2.48□□□□□ -2.01
XRCC4-203ENST00000396027 LINC01558Q9Y6Z2 57 aa2.48□□□□□ -2.01
XRCC4-203ENST00000396027 DSCAML1Q8TD84 2053 aa2.48□□□□□ -2.01
XRCC4-203ENST00000396027 SEC16AO15027 2179 aa2.48□□□□□ -2.01
XRCC4-203ENST00000396027 TRGV2A0A075B6R0 118 aa2.47□□□□□ -2.01
XRCC4-203ENST00000396027 A0A087WYN8 130 aa2.47□□□□□ -2.01
XRCC4-203ENST00000396027 IGHV3-72A0A0B4J1Y9 119 aa2.47□□□□□ -2.01
XRCC4-203ENST00000396027 SPTY2D1-AS1A0A0U1RR47 76 aa2.47□□□□□ -2.01
XRCC4-203ENST00000396027 IGKV2-29A2NJV5 120 aaPredicted RBP2.47□□□□□ -2.01
XRCC4-203ENST00000396027 K7EQD1 137 aa2.47□□□□□ -2.01
XRCC4-203ENST00000396027 IGKV3-15P01624 115 aa2.47□□□□□ -2.01
XRCC4-203ENST00000396027 RPL39P62891 51 aaKnown RBP2.47□□□□□ -2.01
XRCC4-203ENST00000396027 MRGPRG-AS1Q2M3A8 158 aa2.47□□□□□ -2.01
XRCC4-203ENST00000396027 PATE1Q8WXA2 126 aa2.47□□□□□ -2.01
XRCC4-203ENST00000396027 KCNQ1DNQ9H478 68 aa2.47□□□□□ -2.01
XRCC4-203ENST00000396027 CNTRLQ7Z7A1 2325 aa2.47□□□□□ -2.01
XRCC4-203ENST00000396027 IGLV11-55A0A075B6I3 123 aa2.47□□□□□ -2.01
XRCC4-203ENST00000396027 IGHV3OR16-13A0A075B7E8 117 aa2.47□□□□□ -2.01
XRCC4-203ENST00000396027 IGHV3-21A0A0B4J1V1 117 aa2.47□□□□□ -2.01
XRCC4-203ENST00000396027 C10orf142B7Z368 130 aa2.47□□□□□ -2.01
XRCC4-203ENST00000396027 CDK2AP2O75956 126 aa2.47□□□□□ -2.01
XRCC4-203ENST00000396027 RNASE3P12724 160 aaKnown RBP2.47□□□□□ -2.01
XRCC4-203ENST00000396027 TFF2Q03403 129 aa2.47□□□□□ -2.01
XRCC4-203ENST00000396027 DEFB110Q30KQ9 67 aa2.47□□□□□ -2.01
XRCC4-203ENST00000396027 PRSS33Q8NF86 280 aa2.47□□□□□ -2.01
XRCC4-203ENST00000396027 NPBQ8NG41 125 aa2.47□□□□□ -2.01
XRCC4-203ENST00000396027 Q8TAT8 98 aa2.47□□□□□ -2.01
XRCC4-203ENST00000396027 ZNF702PQ9H963 129 aa2.47□□□□□ -2.01
XRCC4-203ENST00000396027 CEP350Q5VT06 3117 aa2.46□□□□□ -2.02
XRCC4-203ENST00000396027 IGHV4-30-2A0A087WSY4 118 aa2.46□□□□□ -2.02
XRCC4-203ENST00000396027 IGHV3-15A0A0B4J1V0 119 aa2.46□□□□□ -2.02
XRCC4-203ENST00000396027 K7EQG2 157 aa2.46□□□□□ -2.02
XRCC4-203ENST00000396027 IGKV2-30P06310 120 aa2.46□□□□□ -2.02
XRCC4-203ENST00000396027 SEC61BP60468 96 aaKnown RBP2.46□□□□□ -2.02
XRCC4-203ENST00000396027 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.46□□□□□ -2.02
XRCC4-203ENST00000396027 COX7B2Q8TF08 81 aa2.46□□□□□ -2.02
XRCC4-203ENST00000396027 WFDC10AQ9H1F0 79 aa2.46□□□□□ -2.02
XRCC4-203ENST00000396027 KAAG1Q9UBP8 84 aa2.46□□□□□ -2.02
XRCC4-203ENST00000396027 CDKN2A-AS1Q9UH64 79 aa2.46□□□□□ -2.02
XRCC4-203ENST00000396027 A0A0C4DFX4 3053 aa2.46□□□□□ -2.02
XRCC4-203ENST00000396027 PI4KAP42356 2102 aa2.45□□□□□ -2.02
XRCC4-203ENST00000396027 SVILO95425 2214 aa2.45□□□□□ -2.02
XRCC4-203ENST00000396027 MALRD1Q5VYJ5 2156 aa2.45□□□□□ -2.02
XRCC4-203ENST00000396027 IGHV3-64A0A075B6Q5 118 aa2.45□□□□□ -2.02
XRCC4-203ENST00000396027 A0A0A0MQY5 61 aa2.45□□□□□ -2.02
XRCC4-203ENST00000396027 SMIM1B2RUZ4 78 aa2.45□□□□□ -2.02
XRCC4-203ENST00000396027 NDUFA4O00483 81 aa2.45□□□□□ -2.02
XRCC4-203ENST00000396027 MSMBP08118 114 aa2.45□□□□□ -2.02
XRCC4-203ENST00000396027 PROK1P58294 105 aa2.45□□□□□ -2.02
XRCC4-203ENST00000396027 LMO4P61968 165 aa2.45□□□□□ -2.02
XRCC4-203ENST00000396027 MOBPQ13875 183 aa2.45□□□□□ -2.02
XRCC4-203ENST00000396027 LINC00575Q6W349 94 aa2.45□□□□□ -2.02
XRCC4-203ENST00000396027 ZFAND2AQ8N6M9 145 aa2.45□□□□□ -2.02
XRCC4-203ENST00000396027 MAP6D1Q9H9H5 199 aa2.45□□□□□ -2.02
XRCC4-203ENST00000396027 IGKV2-28A0A075B6P5 120 aa2.44□□□□□ -2.02
XRCC4-203ENST00000396027 IGHV3-38A0A0C4DH36 116 aa2.44□□□□□ -2.02
XRCC4-203ENST00000396027 IGKV2D-28P01615 120 aa2.44□□□□□ -2.02
XRCC4-203ENST00000396027 IGLV1-44P01699 117 aa2.44□□□□□ -2.02
XRCC4-203ENST00000396027 IGHV1-2P23083 117 aa2.44□□□□□ -2.02
XRCC4-203ENST00000396027 LINC00158P58513 81 aa2.44□□□□□ -2.02
XRCC4-203ENST00000396027 SPAG11BQ08648 103 aa2.44□□□□□ -2.02
XRCC4-203ENST00000396027 IGFL3Q6UXB1 125 aa2.44□□□□□ -2.02
XRCC4-203ENST00000396027 C18orf65Q6ZTR6 163 aa2.44□□□□□ -2.02
XRCC4-203ENST00000396027 ZNRF1Q8ND25 227 aa2.44□□□□□ -2.02
XRCC4-203ENST00000396027 GAFA1Q96PS6 74 aa2.44□□□□□ -2.02
XRCC4-203ENST00000396027 PRR14LQ5THK1 2151 aa2.44□□□□□ -2.02
XRCC4-203ENST00000396027 HTTP42858 3142 aa2.44□□□□□ -2.02
XRCC4-203ENST00000396027 PLXNB1O43157 2135 aa2.44□□□□□ -2.02
XRCC4-203ENST00000396027 CENPFP49454 3210 aa2.44□□□□□ -2.02
XRCC4-203ENST00000396027 IGLV3-9A0A075B6K5 115 aa2.43□□□□□ -2.02
XRCC4-203ENST00000396027 LINC01565O15544 149 aa2.43□□□□□ -2.02
XRCC4-203ENST00000396027 IGHV1-46P01743 117 aa2.43□□□□□ -2.02
XRCC4-203ENST00000396027 IGHV3-23P01764 117 aa2.43□□□□□ -2.02
XRCC4-203ENST00000396027 IGHV3-53P01767 116 aa2.43□□□□□ -2.02
XRCC4-203ENST00000396027 IGKV4-1P06312 121 aa2.43□□□□□ -2.02
XRCC4-203ENST00000396027 NANOS2P60321 138 aaKnown RBP2.43□□□□□ -2.02
XRCC4-203ENST00000396027 NDPQ00604 133 aa2.43□□□□□ -2.02
XRCC4-203ENST00000396027 LINC00242Q5T6M2 205 aa2.43□□□□□ -2.02
XRCC4-203ENST00000396027 KPRPQ5T749 579 aaPredicted RBP2.43□□□□□ -2.02
XRCC4-203ENST00000396027 ZNF706Q9Y5V0 76 aaPredicted RBP2.43□□□□□ -2.02
XRCC4-203ENST00000396027 S4R3C0 116 aa2.43□□□□□ -2.02
XRCC4-203ENST00000396027 MED13Q9UHV7 2174 aa2.43□□□□□ -2.02
XRCC4-203ENST00000396027 KIAA0100Q14667 2235 aaKnown RBP2.43□□□□□ -2.02
XRCC4-203ENST00000396027 PRRC2BQ5JSZ5 2229 aaKnown RBP2.43□□□□□ -2.02
XRCC4-203ENST00000396027 ZNF318Q5VUA4 2279 aa2.43□□□□□ -2.02
XRCC4-203ENST00000396027 IGLV7-46A0A075B6I9 117 aa2.42□□□□□ -2.02
XRCC4-203ENST00000396027 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.42□□□□□ -2.02
XRCC4-203ENST00000396027 IGHV7-81A0A0B4J1V7 117 aa2.42□□□□□ -2.02
XRCC4-203ENST00000396027 LY6G6EA0A0G2JKS1 128 aa2.42□□□□□ -2.02
XRCC4-203ENST00000396027 H0Y9P7 68 aa2.42□□□□□ -2.02
XRCC4-203ENST00000396027 H3BUA1 57 aa2.42□□□□□ -2.02
XRCC4-203ENST00000396027 IGLV1-47P01700 117 aa2.42□□□□□ -2.02
XRCC4-203ENST00000396027 IGHV3-48P01763 117 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms