RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 LINC00526Q96FQ7 95 aa12.65□□□□□ -0.39
UBFD1-201ENST00000395878 CLUHP3Q96NS8 147 aa12.64□□□□□ -0.39
UBFD1-201ENST00000395878 C3orf84H3BNL1 204 aa12.64□□□□□ -0.39
UBFD1-201ENST00000395878 LINC00310P59036 64 aa12.64□□□□□ -0.39
UBFD1-201ENST00000395878 POM121L12Q8N7R1 296 aa12.64□□□□□ -0.39
UBFD1-201ENST00000395878 CRIP2P52943 208 aaPredicted RBP12.63□□□□□ -0.39
UBFD1-201ENST00000395878 CDSNQ15517 529 aa12.63□□□□□ -0.39
UBFD1-201ENST00000395878 SERP2Q8N6R1 65 aa12.63□□□□□ -0.39
UBFD1-201ENST00000395878 WFDC10BQ8IUB3 73 aa12.63□□□□□ -0.39
UBFD1-201ENST00000395878 LRCOL1A6NCL2 159 aa12.63□□□□□ -0.39
UBFD1-201ENST00000395878 AVPP01185 164 aa12.62□□□□□ -0.39
UBFD1-201ENST00000395878 C7orf33Q8WU49 177 aa12.62□□□□□ -0.39
UBFD1-201ENST00000395878 LOC107984640A0A0U1RRK4 108 aa12.62□□□□□ -0.39
UBFD1-201ENST00000395878 ATG2AQ2TAZ0 1938 aa12.62□□□□□ -0.39
UBFD1-201ENST00000395878 NDUFC1O43677 76 aa12.61□□□□□ -0.39
UBFD1-201ENST00000395878 ZNF73O43830 326 aaPredicted RBP12.61□□□□□ -0.39
UBFD1-201ENST00000395878 URB1-AS1Q96HZ7 61 aa12.61□□□□□ -0.39
UBFD1-201ENST00000395878 ZNF706Q9Y5V0 76 aaPredicted RBP12.61□□□□□ -0.39
UBFD1-201ENST00000395878 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.61□□□□□ -0.39
UBFD1-201ENST00000395878 ATP5EP56381 51 aaPredicted RBP12.6□□□□□ -0.39
UBFD1-201ENST00000395878 ODF3L2Q3SX64 289 aa12.6□□□□□ -0.39
UBFD1-201ENST00000395878 LINC00242Q5T6M2 205 aa12.6□□□□□ -0.39
UBFD1-201ENST00000395878 NDUFC2-KCTD14E9PQ53 114 aa12.6□□□□□ -0.39
UBFD1-201ENST00000395878 NDUFA7O95182 113 aa12.6□□□□□ -0.39
UBFD1-201ENST00000395878 MPLKIPQ8TAP9 179 aa12.6□□□□□ -0.39
UBFD1-201ENST00000395878 FAM19A3Q7Z5A8 133 aa12.59□□□□□ -0.39
UBFD1-201ENST00000395878 LRP4O75096 1905 aa12.57□□□□□ -0.4
UBFD1-201ENST00000395878 COX8CQ7Z4L0 72 aa12.57□□□□□ -0.4
UBFD1-201ENST00000395878 NCOR2Q9Y618 2525 aa12.57□□□□□ -0.4
UBFD1-201ENST00000395878 PIEZO1Q92508 2521 aa12.57□□□□□ -0.4
UBFD1-201ENST00000395878 CYSRT1A8MQ03 144 aa12.57□□□□□ -0.4
UBFD1-201ENST00000395878 BRI3O95415 125 aa12.57□□□□□ -0.4
UBFD1-201ENST00000395878 SVIPQ8NHG7 77 aa12.56□□□□□ -0.4
UBFD1-201ENST00000395878 PPDPFQ9H3Y8 114 aa12.56□□□□□ -0.4
UBFD1-201ENST00000395878 ABCA2Q9BZC7 2435 aa12.56□□□□□ -0.4
UBFD1-201ENST00000395878 EDN2P20800 178 aa12.56□□□□□ -0.4
UBFD1-201ENST00000395878 SPTSSBQ8NFR3 76 aa12.56□□□□□ -0.4
UBFD1-201ENST00000395878 IGF2RP11717 2491 aa12.55□□□□□ -0.4
UBFD1-201ENST00000395878 FAM240AA0A1B0GVK7 77 aa12.55□□□□□ -0.4
UBFD1-201ENST00000395878 IGLV2-18A0A075B6J9 118 aa12.55□□□□□ -0.4
UBFD1-201ENST00000395878 SMIM1B2RUZ4 78 aa12.55□□□□□ -0.4
UBFD1-201ENST00000395878 XGP55808 180 aa12.55□□□□□ -0.4
UBFD1-201ENST00000395878 Q6JHZ5 121 aa12.55□□□□□ -0.4
UBFD1-201ENST00000395878 CHCHD7Q9BUK0 85 aa12.55□□□□□ -0.4
UBFD1-201ENST00000395878 IGHV4-30-4P0DP06 118 aa12.54□□□□□ -0.4
UBFD1-201ENST00000395878 ZNF580Q9UK33 172 aa12.54□□□□□ -0.4
UBFD1-201ENST00000395878 V9GYY9 64 aa12.54□□□□□ -0.4
UBFD1-201ENST00000395878 COX7CP15954 63 aa12.54□□□□□ -0.4
UBFD1-201ENST00000395878 MYO9AB2RTY4 2548 aa12.53□□□□□ -0.4
UBFD1-201ENST00000395878 PIEZO2Q9H5I5 2752 aa12.53□□□□□ -0.4
UBFD1-201ENST00000395878 RPL37AP8A6NKH3 93 aa12.53□□□□□ -0.4
UBFD1-201ENST00000395878 WFDC13Q8IUB5 93 aa12.53□□□□□ -0.4
UBFD1-201ENST00000395878 IGLV1-51P01701 117 aa12.52□□□□□ -0.41
UBFD1-201ENST00000395878 EGFEM1PQ0D2K5 195 aa12.52□□□□□ -0.41
UBFD1-201ENST00000395878 LINC00474Q9P2X8 69 aa12.52□□□□□ -0.41
UBFD1-201ENST00000395878 NANOS2P60321 138 aaKnown RBP12.51□□□□□ -0.41
UBFD1-201ENST00000395878 NTM-AS1Q6ZSK4 140 aa12.51□□□□□ -0.41
UBFD1-201ENST00000395878 A0A0J9YWU9 116 aa12.51□□□□□ -0.41
UBFD1-201ENST00000395878 SNURFQ9Y675 71 aa12.51□□□□□ -0.41
UBFD1-201ENST00000395878 ARHGAP32A7KAX9 2087 aa12.51□□□□□ -0.41
UBFD1-201ENST00000395878 RPL28P46779 137 aaKnown RBP12.5□□□□□ -0.41
UBFD1-201ENST00000395878 UNQ6190/PRO20217Q6UXQ8 127 aa12.5□□□□□ -0.41
UBFD1-201ENST00000395878 SPINK6Q6UWN8 80 aa12.49□□□□□ -0.41
UBFD1-201ENST00000395878 CSDC2Q9Y534 153 aaKnown RBP12.49□□□□□ -0.41
UBFD1-201ENST00000395878 Q6Q795 121 aa12.49□□□□□ -0.41
UBFD1-201ENST00000395878 PLAC8L1A1L4L8 177 aa12.49□□□□□ -0.41
UBFD1-201ENST00000395878 MRPL55Q7Z7F7 128 aaKnown RBP12.48□□□□□ -0.41
UBFD1-201ENST00000395878 AMELXQ99217 191 aa12.48□□□□□ -0.41
UBFD1-201ENST00000395878 OXLD1Q5BKU9 147 aa12.48□□□□□ -0.41
UBFD1-201ENST00000395878 PRR15LQ9BU68 103 aa12.48□□□□□ -0.41
UBFD1-201ENST00000395878 M0R2N4 97 aa12.47□□□□□ -0.41
UBFD1-201ENST00000395878 TSPEAR-AS2P59090 65 aa12.47□□□□□ -0.41
UBFD1-201ENST00000395878 COX6A2Q02221 97 aa12.47□□□□□ -0.41
UBFD1-201ENST00000395878 Q8N814 137 aa12.46□□□□□ -0.41
UBFD1-201ENST00000395878 CCDC179H3BU77 68 aa12.46□□□□□ -0.41
UBFD1-201ENST00000395878 K7ERS5 55 aa12.46□□□□□ -0.41
UBFD1-201ENST00000395878 PLA2G2AP14555 144 aa12.46□□□□□ -0.41
UBFD1-201ENST00000395878 PRRC2AP48634 2157 aaKnown RBP12.46□□□□□ -0.41
UBFD1-201ENST00000395878 FHL2Q14192 279 aa12.45□□□□□ -0.42
UBFD1-201ENST00000395878 LINC00694P0DN24 101 aa12.45□□□□□ -0.42
UBFD1-201ENST00000395878 BEAN1Q3B7T3 259 aa12.45□□□□□ -0.42
UBFD1-201ENST00000395878 IGLV4-60A0A075B6I1 120 aa12.45□□□□□ -0.42
UBFD1-201ENST00000395878 PTPRSQ13332 1948 aa12.45□□□□□ -0.42
UBFD1-201ENST00000395878 KRTAP10-9P60411 292 aa12.45□□□□□ -0.42
UBFD1-201ENST00000395878 Q8N9L7 120 aa12.44□□□□□ -0.42
UBFD1-201ENST00000395878 A0A096LNJ9 63 aa12.44□□□□□ -0.42
UBFD1-201ENST00000395878 TRBV10-3A0A0K0K1G6 114 aa12.44□□□□□ -0.42
UBFD1-201ENST00000395878 HRCT1Q6UXD1 115 aa12.44□□□□□ -0.42
UBFD1-201ENST00000395878 EML5Q05BV3 1969 aa12.44□□□□□ -0.42
UBFD1-201ENST00000395878 TLN1Q9Y490 2541 aaKnown RBP12.44□□□□□ -0.42
UBFD1-201ENST00000395878 A0A1W2PPR1 153 aa12.43□□□□□ -0.42
UBFD1-201ENST00000395878 C16orf95Q9H693 158 aa12.43□□□□□ -0.42
UBFD1-201ENST00000395878 IGLV9-49A0A0B4J1Y8 123 aa12.43□□□□□ -0.42
UBFD1-201ENST00000395878 C9orf116Q5BN46 136 aaPredicted RBP12.42□□□□□ -0.42
UBFD1-201ENST00000395878 ADAMTSL4-AS1Q5T5F5 129 aa12.41□□□□□ -0.42
UBFD1-201ENST00000395878 M0QXV9 152 aa12.41□□□□□ -0.42
UBFD1-201ENST00000395878 C10orf25Q5T742 122 aa12.41□□□□□ -0.42
UBFD1-201ENST00000395878 SMR3AQ99954 134 aa12.39□□□□□ -0.43
UBFD1-201ENST00000395878 FAM30AQ9NZY2 134 aa12.39□□□□□ -0.43
UBFD1-201ENST00000395878 TRAV7A0A075B6U4 112 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms