RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 UBE2D4Q9Y2X8 147 aa12.25□□□□□ -0.45
UPK3B-203ENST00000394849 GVQW2A0A096LPI5 108 aaPredicted RBP12.24□□□□□ -0.45
UPK3B-203ENST00000394849 SNAPINO95295 136 aa12.24□□□□□ -0.45
UPK3B-203ENST00000394849 SVBPQ8N300 66 aa12.24□□□□□ -0.45
UPK3B-203ENST00000394849 SS18Q15532 418 aa12.23□□□□□ -0.45
UPK3B-203ENST00000394849 COX19Q49B96 90 aa12.23□□□□□ -0.45
UPK3B-203ENST00000394849 HIGD2BQ4VC39 106 aa12.23□□□□□ -0.45
UPK3B-203ENST00000394849 CSDC2Q9Y534 153 aaKnown RBP12.23□□□□□ -0.45
UPK3B-203ENST00000394849 A0A096LNI7 61 aa12.22□□□□□ -0.45
UPK3B-203ENST00000394849 LINC00959A0A1B0GUT2 108 aa12.22□□□□□ -0.45
UPK3B-203ENST00000394849 PRSS47A8MTI9 375 aa12.22□□□□□ -0.45
UPK3B-203ENST00000394849 RPL39P62891 51 aaKnown RBP12.22□□□□□ -0.45
UPK3B-203ENST00000394849 KIAA1644Q3SXP7 199 aa12.22□□□□□ -0.45
UPK3B-203ENST00000394849 TIMM21Q9BVV7 248 aa12.22□□□□□ -0.45
UPK3B-203ENST00000394849 GNB1LQ9BYB4 327 aa12.22□□□□□ -0.45
UPK3B-203ENST00000394849 XCL1P47992 114 aa12.21□□□□□ -0.45
UPK3B-203ENST00000394849 RNASE13Q5GAN3 156 aaKnown RBP12.21□□□□□ -0.45
UPK3B-203ENST00000394849 Q8N8P6 123 aa12.21□□□□□ -0.45
UPK3B-203ENST00000394849 CCL25O15444 150 aa12.2□□□□□ -0.46
UPK3B-203ENST00000394849 Q6ZUT4 128 aa12.2□□□□□ -0.46
UPK3B-203ENST00000394849 SPANXA1Q9NS26 97 aa12.2□□□□□ -0.46
UPK3B-203ENST00000394849 MT-ND6P03923 174 aa12.18□□□□□ -0.46
UPK3B-203ENST00000394849 NXT2Q9NPJ8 142 aaKnown RBP12.18□□□□□ -0.46
UPK3B-203ENST00000394849 TRAV13-1A0A0B4J241 112 aa12.17□□□□□ -0.46
UPK3B-203ENST00000394849 IFI27P40305 119 aaPredicted RBP12.17□□□□□ -0.46
UPK3B-203ENST00000394849 FOXI1Q12951 378 aa12.17□□□□□ -0.46
UPK3B-203ENST00000394849 C1orf196B1AJZ1 125 aa12.16□□□□□ -0.46
UPK3B-203ENST00000394849 FABP9Q0Z7S8 132 aa12.16□□□□□ -0.46
UPK3B-203ENST00000394849 ORMDL2Q53FV1 153 aa12.16□□□□□ -0.46
UPK3B-203ENST00000394849 MRPL18Q9H0U6 180 aaKnown RBP12.16□□□□□ -0.46
UPK3B-203ENST00000394849 TGIF2-C20orf24A0A0A6YYL0 155 aa12.15□□□□□ -0.46
UPK3B-203ENST00000394849 K7EMI3 77 aa12.15□□□□□ -0.46
UPK3B-203ENST00000394849 CD164L2Q6UWJ8 174 aa12.15□□□□□ -0.46
UPK3B-203ENST00000394849 CYSLTR1Q9Y271 337 aa12.15□□□□□ -0.46
UPK3B-203ENST00000394849 MRPS36P82909 103 aaKnown RBP12.14□□□□□ -0.47
UPK3B-203ENST00000394849 CARD19Q96LW7 228 aa12.14□□□□□ -0.47
UPK3B-203ENST00000394849 OPRPNQ99935 248 aaPredicted RBP12.14□□□□□ -0.47
UPK3B-203ENST00000394849 PSORS1C2Q9UIG4 136 aa12.14□□□□□ -0.47
UPK3B-203ENST00000394849 LPAP08519 4548 aa12.13□□□□□ -0.47
UPK3B-203ENST00000394849 C2orf66Q6UXQ4 117 aa12.13□□□□□ -0.47
UPK3B-203ENST00000394849 ALKBH7Q9BT30 221 aaPredicted RBP12.13□□□□□ -0.47
UPK3B-203ENST00000394849 IGHV1-58A0A0C4DH39 117 aa12.12□□□□□ -0.47
UPK3B-203ENST00000394849 A0A0U1RQV1 116 aa12.12□□□□□ -0.47
UPK3B-203ENST00000394849 IFITM10A6NMD0 228 aa12.12□□□□□ -0.47
UPK3B-203ENST00000394849 G0S2P27469 103 aa12.12□□□□□ -0.47
UPK3B-203ENST00000394849 SLC7A5P1Q8MH63 180 aa12.12□□□□□ -0.47
UPK3B-203ENST00000394849 PYGO1Q9Y3Y4 419 aa12.12□□□□□ -0.47
UPK3B-203ENST00000394849 TRAPPC1Q9Y5R8 145 aa12.12□□□□□ -0.47
UPK3B-203ENST00000394849 MALP21145 153 aa12.11□□□□□ -0.47
UPK3B-203ENST00000394849 COX7A2LO14548 114 aa12.1□□□□□ -0.47
UPK3B-203ENST00000394849 TMEM141Q96I45 108 aa12.1□□□□□ -0.47
UPK3B-203ENST00000394849 IGLV4-3A0A075B6K6 122 aa12.09□□□□□ -0.47
UPK3B-203ENST00000394849 PTTG1IPP53801 180 aa12.09□□□□□ -0.47
UPK3B-203ENST00000394849 SYCNQ0VAF6 134 aa12.09□□□□□ -0.47
UPK3B-203ENST00000394849 Q6ZN92 141 aa12.09□□□□□ -0.47
UPK3B-203ENST00000394849 FAM104AQ969W3 186 aa12.09□□□□□ -0.47
UPK3B-203ENST00000394849 ZNF561-AS1K7EIQ3 104 aa12.08□□□□□ -0.48
UPK3B-203ENST00000394849 TEX43Q6ZNM6 134 aa12.08□□□□□ -0.48
UPK3B-203ENST00000394849 FA2HQ7L5A8 372 aa12.08□□□□□ -0.48
UPK3B-203ENST00000394849 C5orf38Q86SI9 138 aa12.08□□□□□ -0.48
UPK3B-203ENST00000394849 SMCO4Q9NRQ5 59 aa12.08□□□□□ -0.48
UPK3B-203ENST00000394849 LOC107984640A0A0U1RRK4 108 aa12.07□□□□□ -0.48
UPK3B-203ENST00000394849 C2orf88Q9BSF0 95 aa12.07□□□□□ -0.48
UPK3B-203ENST00000394849 KRTAP9-2Q9BYQ4 174 aa12.07□□□□□ -0.48
UPK3B-203ENST00000394849 APOMO95445 188 aa12.05□□□□□ -0.48
UPK3B-203ENST00000394849 VCX2Q9H322 139 aa12.05□□□□□ -0.48
UPK3B-203ENST00000394849 NPSP0C0P6 89 aa12.04□□□□□ -0.48
UPK3B-203ENST00000394849 PAPPA-AS1Q5QFB9 102 aa12.04□□□□□ -0.48
UPK3B-203ENST00000394849 CBLN2Q8IUK8 224 aa12.04□□□□□ -0.48
UPK3B-203ENST00000394849 DIRC1Q969H9 104 aa12.04□□□□□ -0.48
UPK3B-203ENST00000394849 TOMM6Q96B49 74 aa12.04□□□□□ -0.48
UPK3B-203ENST00000394849 LINC00526Q96FQ7 95 aa12.04□□□□□ -0.48
UPK3B-203ENST00000394849 IGIPA6NJ69 53 aa12.03□□□□□ -0.48
UPK3B-203ENST00000394849 GAGE2BQ13066 116 aa12.03□□□□□ -0.48
UPK3B-203ENST00000394849 SCGB3A1Q96QR1 104 aa12.03□□□□□ -0.48
UPK3B-203ENST00000394849 MUC2Q02817 5179 aa12.03□□□□□ -0.48
UPK3B-203ENST00000394849 LINC01546A6NGU7 62 aa12.02□□□□□ -0.49
UPK3B-203ENST00000394849 LINC01549A6NIU2 74 aa12.02□□□□□ -0.49
UPK3B-203ENST00000394849 ZC2HC1BQ5TFG8 222 aa12.02□□□□□ -0.49
UPK3B-203ENST00000394849 YPEL4Q96NS1 127 aa12.02□□□□□ -0.49
UPK3B-203ENST00000394849 TIMM17AQ99595 171 aa12.02□□□□□ -0.49
UPK3B-203ENST00000394849 IGHV3OR16-9A0A0B4J2B5 98 aa12.01□□□□□ -0.49
UPK3B-203ENST00000394849 C1orf137Q5JT78 98 aa12.01□□□□□ -0.49
UPK3B-203ENST00000394849 C18orf32Q8TCD1 76 aa12.01□□□□□ -0.49
UPK3B-203ENST00000394849 AMELXQ99217 191 aa12.01□□□□□ -0.49
UPK3B-203ENST00000394849 IGLV4-69A0A075B6H9 119 aa12□□□□□ -0.49
UPK3B-203ENST00000394849 A0A1W2PNN7 141 aa12□□□□□ -0.49
UPK3B-203ENST00000394849 UBE2D1P51668 147 aa12□□□□□ -0.49
UPK3B-203ENST00000394849 LINC00242Q5T6M2 205 aa12□□□□□ -0.49
UPK3B-203ENST00000394849 LINC00173Q6ZV60 143 aa12□□□□□ -0.49
UPK3B-203ENST00000394849 ERASQ7Z444 233 aa12□□□□□ -0.49
UPK3B-203ENST00000394849 SPAG11BQ08648 103 aa11.99□□□□□ -0.49
UPK3B-203ENST00000394849 PRR26Q8N8Z3 221 aa11.99□□□□□ -0.49
UPK3B-203ENST00000394849 ORAOV1Q8WV07 137 aa11.99□□□□□ -0.49
UPK3B-203ENST00000394849 IGLV1-50A0A075B6I6 118 aa11.98□□□□□ -0.49
UPK3B-203ENST00000394849 C9orf116Q5BN46 136 aaPredicted RBP11.98□□□□□ -0.49
UPK3B-203ENST00000394849 OR10D4PQ8NGN7 298 aa11.98□□□□□ -0.49
UPK3B-203ENST00000394849 CAMK2N2Q96S95 79 aa11.98□□□□□ -0.49
UPK3B-203ENST00000394849 LINC00614P0C842 121 aa11.97□□□□□ -0.49
UPK3B-203ENST00000394849 RAB5BP61020 215 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms