RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 TRAV9-1A0A075B6T8 112 aa4.91□□□□□ -1.62
HMGB3P1-201ENST00000393368 IGHV1-58A0A0C4DH39 117 aa4.91□□□□□ -1.62
HMGB3P1-201ENST00000393368 C1orf196B1AJZ1 125 aa4.91□□□□□ -1.62
HMGB3P1-201ENST00000393368 EIF4EBP3O60516 100 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P1-201ENST00000393368 SDIM1Q6ZPB5 146 aa4.91□□□□□ -1.62
HMGB3P1-201ENST00000393368 PKHD1L1Q86WI1 4243 aa4.91□□□□□ -1.62
HMGB3P1-201ENST00000393368 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P1-201ENST00000393368 IGKV2-24A0A0C4DH68 120 aa4.9□□□□□ -1.63
HMGB3P1-201ENST00000393368 COX7A2LO14548 114 aa4.9□□□□□ -1.63
HMGB3P1-201ENST00000393368 INAFM2P0DMQ5 153 aa4.9□□□□□ -1.63
HMGB3P1-201ENST00000393368 MALP21145 153 aa4.9□□□□□ -1.63
HMGB3P1-201ENST00000393368 MRPS36P82909 103 aaKnown RBP4.9□□□□□ -1.63
HMGB3P1-201ENST00000393368 COX6A2Q02221 97 aa4.9□□□□□ -1.63
HMGB3P1-201ENST00000393368 C2orf66Q6UXQ4 117 aa4.9□□□□□ -1.63
HMGB3P1-201ENST00000393368 PRSS3P2Q8NHM4 247 aa4.9□□□□□ -1.63
HMGB3P1-201ENST00000393368 GNB1LQ9BYB4 327 aa4.9□□□□□ -1.63
HMGB3P1-201ENST00000393368 IGLV4-69A0A075B6H9 119 aa4.89□□□□□ -1.63
HMGB3P1-201ENST00000393368 ZNF561-AS1K7EIQ3 104 aa4.89□□□□□ -1.63
HMGB3P1-201ENST00000393368 FABP9Q0Z7S8 132 aa4.89□□□□□ -1.63
HMGB3P1-201ENST00000393368 ORMDL2Q53FV1 153 aa4.89□□□□□ -1.63
HMGB3P1-201ENST00000393368 LINC00173Q6ZV60 143 aa4.89□□□□□ -1.63
HMGB3P1-201ENST00000393368 SLC7A5P1Q8MH63 180 aa4.89□□□□□ -1.63
HMGB3P1-201ENST00000393368 SVBPQ8N300 66 aa4.89□□□□□ -1.63
HMGB3P1-201ENST00000393368 CARD19Q96LW7 228 aa4.89□□□□□ -1.63
HMGB3P1-201ENST00000393368 ALKBH7Q9BT30 221 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P1-201ENST00000393368 KRTAP9-2Q9BYQ4 174 aa4.89□□□□□ -1.63
HMGB3P1-201ENST00000393368 NXT2Q9NPJ8 142 aaKnown RBP4.89□□□□□ -1.63
HMGB3P1-201ENST00000393368 CYSLTR1Q9Y271 337 aa4.89□□□□□ -1.63
HMGB3P1-201ENST00000393368 HERC1Q15751 4861 aa4.88□□□□□ -1.63
HMGB3P1-201ENST00000393368 A0A096LNI7 61 aa4.88□□□□□ -1.63
HMGB3P1-201ENST00000393368 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P1-201ENST00000393368 SNAPINO95295 136 aa4.88□□□□□ -1.63
HMGB3P1-201ENST00000393368 SPAG11BQ08648 103 aa4.88□□□□□ -1.63
HMGB3P1-201ENST00000393368 NDUFA5Q16718 116 aa4.88□□□□□ -1.63
HMGB3P1-201ENST00000393368 Q6ZRU5 148 aa4.88□□□□□ -1.63
HMGB3P1-201ENST00000393368 SPACA4Q8TDM5 124 aa4.88□□□□□ -1.63
HMGB3P1-201ENST00000393368 TMEM141Q96I45 108 aa4.88□□□□□ -1.63
HMGB3P1-201ENST00000393368 PYGO1Q9Y3Y4 419 aa4.88□□□□□ -1.63
HMGB3P1-201ENST00000393368 FAT3Q8TDW7 4589 aa4.87□□□□□ -1.63
HMGB3P1-201ENST00000393368 A0A087WYN8 130 aa4.87□□□□□ -1.63
HMGB3P1-201ENST00000393368 IGHV3OR16-9A0A0B4J2B5 98 aa4.87□□□□□ -1.63
HMGB3P1-201ENST00000393368 A0A0J9YXV3 536 aa4.87□□□□□ -1.63
HMGB3P1-201ENST00000393368 IGIPA6NJ69 53 aa4.87□□□□□ -1.63
HMGB3P1-201ENST00000393368 MT-ND6P03923 174 aa4.87□□□□□ -1.63
HMGB3P1-201ENST00000393368 UBE2D1P51668 147 aa4.87□□□□□ -1.63
HMGB3P1-201ENST00000393368 KRTAP10-4P60372 401 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P1-201ENST00000393368 SYCNQ0VAF6 134 aa4.87□□□□□ -1.63
HMGB3P1-201ENST00000393368 CIRBPQ14011 172 aaKnown RBP4.87□□□□□ -1.63
HMGB3P1-201ENST00000393368 ODF1Q14990 250 aa4.87□□□□□ -1.63
HMGB3P1-201ENST00000393368 MAJINQ3KP22 176 aa4.87□□□□□ -1.63
HMGB3P1-201ENST00000393368 LINC00242Q5T6M2 205 aa4.87□□□□□ -1.63
HMGB3P1-201ENST00000393368 TEX43Q6ZNM6 134 aa4.87□□□□□ -1.63
HMGB3P1-201ENST00000393368 ORAOV1Q8WV07 137 aa4.87□□□□□ -1.63
HMGB3P1-201ENST00000393368 DPH3Q96FX2 82 aa4.87□□□□□ -1.63
HMGB3P1-201ENST00000393368 TRAPPC1Q9Y5R8 145 aa4.87□□□□□ -1.63
HMGB3P1-201ENST00000393368 LRP1Q07954 4544 aaKnown RBP4.86□□□□□ -1.63
HMGB3P1-201ENST00000393368 KRTAP9-6A0A140TA67 174 aa4.86□□□□□ -1.63
HMGB3P1-201ENST00000393368 PLA2G1BP04054 148 aaKnown RBP4.86□□□□□ -1.63
HMGB3P1-201ENST00000393368 COX19Q49B96 90 aa4.86□□□□□ -1.63
HMGB3P1-201ENST00000393368 Q6ZN92 141 aa4.86□□□□□ -1.63
HMGB3P1-201ENST00000393368 CBLN2Q8IUK8 224 aa4.86□□□□□ -1.63
HMGB3P1-201ENST00000393368 TOMM6Q96B49 74 aa4.86□□□□□ -1.63
HMGB3P1-201ENST00000393368 YPEL4Q96NS1 127 aa4.86□□□□□ -1.63
HMGB3P1-201ENST00000393368 CAMK2N2Q96S95 79 aa4.86□□□□□ -1.63
HMGB3P1-201ENST00000393368 AMELXQ99217 191 aa4.86□□□□□ -1.63
HMGB3P1-201ENST00000393368 VCX2Q9H322 139 aa4.86□□□□□ -1.63
HMGB3P1-201ENST00000393368 K7EMI3 77 aa4.85□□□□□ -1.63
HMGB3P1-201ENST00000393368 APOMO95445 188 aa4.85□□□□□ -1.63
HMGB3P1-201ENST00000393368 HNRNPA3P51991 378 aaKnown RBP4.85□□□□□ -1.63
HMGB3P1-201ENST00000393368 RPL37AP61513 92 aaKnown RBP4.85□□□□□ -1.63
HMGB3P1-201ENST00000393368 GAGE2BQ13066 116 aa4.85□□□□□ -1.63
HMGB3P1-201ENST00000393368 PMCHL1Q16048 86 aa4.85□□□□□ -1.63
HMGB3P1-201ENST00000393368 C10orf25Q5T742 122 aa4.85□□□□□ -1.63
HMGB3P1-201ENST00000393368 FA2HQ7L5A8 372 aa4.85□□□□□ -1.63
HMGB3P1-201ENST00000393368 C18orf32Q8TCD1 76 aa4.85□□□□□ -1.63
HMGB3P1-201ENST00000393368 URB1-AS1Q96HZ7 61 aa4.85□□□□□ -1.63
HMGB3P1-201ENST00000393368 SCGB3A1Q96QR1 104 aa4.85□□□□□ -1.63
HMGB3P1-201ENST00000393368 C2orf88Q9BSF0 95 aa4.85□□□□□ -1.63
HMGB3P1-201ENST00000393368 SMCO4Q9NRQ5 59 aa4.85□□□□□ -1.63
HMGB3P1-201ENST00000393368 A0A087WZ39 114 aa4.84□□□□□ -1.63
HMGB3P1-201ENST00000393368 LINC01546A6NGU7 62 aa4.84□□□□□ -1.63
HMGB3P1-201ENST00000393368 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P1-201ENST00000393368 RPL18AQ02543 176 aaKnown RBP4.84□□□□□ -1.63
HMGB3P1-201ENST00000393368 UNQ6190/PRO20217Q6UXQ8 127 aa4.84□□□□□ -1.63
HMGB3P1-201ENST00000393368 STPG4Q8N801 248 aa4.84□□□□□ -1.63
HMGB3P1-201ENST00000393368 OR10D4PQ8NGN7 298 aa4.84□□□□□ -1.63
HMGB3P1-201ENST00000393368 C2orf48Q96LS8 159 aa4.84□□□□□ -1.63
HMGB3P1-201ENST00000393368 TIMM17AQ99595 171 aa4.84□□□□□ -1.63
HMGB3P1-201ENST00000393368 PLAC8Q9NZF1 115 aa4.84□□□□□ -1.63
HMGB3P1-201ENST00000393368 A0A096LNJ9 63 aa4.83□□□□□ -1.64
HMGB3P1-201ENST00000393368 PTTG1IPP53801 180 aa4.83□□□□□ -1.64
HMGB3P1-201ENST00000393368 KIAA0087Q14695 138 aa4.83□□□□□ -1.64
HMGB3P1-201ENST00000393368 C2orf82Q6UX34 121 aa4.83□□□□□ -1.64
HMGB3P1-201ENST00000393368 ERASQ7Z444 233 aa4.83□□□□□ -1.64
HMGB3P1-201ENST00000393368 C6orf48Q9UBA6 75 aa4.83□□□□□ -1.64
HMGB3P1-201ENST00000393368 CDKN2A-AS1Q9UH64 79 aa4.83□□□□□ -1.64
HMGB3P1-201ENST00000393368 LOC107984640A0A0U1RRK4 108 aa4.82□□□□□ -1.64
HMGB3P1-201ENST00000393368 NDUFA1O15239 70 aa4.82□□□□□ -1.64
HMGB3P1-201ENST00000393368 TOMM7Q9P0U1 55 aa4.82□□□□□ -1.64
HMGB3P1-201ENST00000393368 A0A1W2PNN7 141 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 304.8 ms