RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 C14orf177Q52M58 125 aa16.68■□□□□ 0.26
HOMER3-202ENST00000392351 NDUFA6P56556 154 aa16.67■□□□□ 0.26
HOMER3-202ENST00000392351 C5orf38Q86SI9 138 aa16.67■□□□□ 0.26
HOMER3-202ENST00000392351 PKHD1P08F94 4074 aa16.66■□□□□ 0.26
HOMER3-202ENST00000392351 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.66■□□□□ 0.26
HOMER3-202ENST00000392351 IGHV3OR16-9A0A0B4J2B5 98 aa16.66■□□□□ 0.26
HOMER3-202ENST00000392351 FUSP35637 526 aaKnown RBP eCLIP16.66■□□□□ 0.26
HOMER3-202ENST00000392351 C15orf56Q8N910 161 aa16.66■□□□□ 0.26
HOMER3-202ENST00000392351 LEPROTL1O95214 131 aa16.65■□□□□ 0.26
HOMER3-202ENST00000392351 MALP21145 153 aa16.65■□□□□ 0.26
HOMER3-202ENST00000392351 COX6A2Q02221 97 aa16.65■□□□□ 0.26
HOMER3-202ENST00000392351 CFAP161Q6P656 301 aa16.65■□□□□ 0.26
HOMER3-202ENST00000392351 IFI27L1Q96BM0 104 aa16.65■□□□□ 0.26
HOMER3-202ENST00000392351 FAM19A3Q7Z5A8 133 aa16.64■□□□□ 0.25
HOMER3-202ENST00000392351 A0A0J9YXV3 536 aa16.64■□□□□ 0.25
HOMER3-202ENST00000392351 PRSS1P07477 247 aa16.64■□□□□ 0.25
HOMER3-202ENST00000392351 SEC11AP67812 179 aa16.64■□□□□ 0.25
HOMER3-202ENST00000392351 COA6Q5JTJ3 125 aaKnown RBP16.64■□□□□ 0.25
HOMER3-202ENST00000392351 hDV102S1A0JD36 115 aa16.63■□□□□ 0.25
HOMER3-202ENST00000392351 FABP4P15090 132 aa16.62■□□□□ 0.25
HOMER3-202ENST00000392351 GEMIN7Q9H840 131 aaKnown RBP16.62■□□□□ 0.25
HOMER3-202ENST00000392351 PGPEP1Q9NXJ5 209 aa16.62■□□□□ 0.25
HOMER3-202ENST00000392351 IGHV1-58A0A0C4DH39 117 aa16.61■□□□□ 0.25
HOMER3-202ENST00000392351 HERVK_113P63121 156 aa16.61■□□□□ 0.25
HOMER3-202ENST00000392351 HIGD2BQ4VC39 106 aa16.61■□□□□ 0.25
HOMER3-202ENST00000392351 NTN5Q8WTR8 489 aaPredicted RBP16.61■□□□□ 0.25
HOMER3-202ENST00000392351 HSPB8Q9UJY1 196 aa16.6■□□□□ 0.25
HOMER3-202ENST00000392351 CDPF1Q6NVV7 123 aa16.6■□□□□ 0.25
HOMER3-202ENST00000392351 A0A087WZ39 114 aa16.59■□□□□ 0.25
HOMER3-202ENST00000392351 GVQW2A0A096LPI5 108 aaPredicted RBP16.59■□□□□ 0.25
HOMER3-202ENST00000392351 IGLV5-52A0A0A0MRZ9 124 aa16.59■□□□□ 0.25
HOMER3-202ENST00000392351 TINCRA0A1B0GVN0 87 aa16.59■□□□□ 0.25
HOMER3-202ENST00000392351 APOMO95445 188 aa16.58■□□□□ 0.24
HOMER3-202ENST00000392351 BIRC6Q9NR09 4857 aa16.57■□□□□ 0.24
HOMER3-202ENST00000392351 CDKN2A-AS1Q9UH64 79 aa16.56■□□□□ 0.24
HOMER3-202ENST00000392351 TRAV12-1A0A0B4J245 112 aa16.55■□□□□ 0.24
HOMER3-202ENST00000392351 C16orf90A8MZG2 172 aa16.55■□□□□ 0.24
HOMER3-202ENST00000392351 H0Y8G0 127 aa16.55■□□□□ 0.24
HOMER3-202ENST00000392351 LINC00469Q8N7U9 141 aa16.55■□□□□ 0.24
HOMER3-202ENST00000392351 IGLV4-69A0A075B6H9 119 aa16.55■□□□□ 0.24
HOMER3-202ENST00000392351 IGLC3P0DOY3 106 aa16.55■□□□□ 0.24
HOMER3-202ENST00000392351 CHAC1Q9BUX1 264 aa16.55■□□□□ 0.24
HOMER3-202ENST00000392351 ZNF561-AS1K7EIQ3 104 aa16.54■□□□□ 0.24
HOMER3-202ENST00000392351 LINC00526Q96FQ7 95 aa16.54■□□□□ 0.24
HOMER3-202ENST00000392351 CHTOPQ9Y3Y2 248 aaKnown RBP16.54■□□□□ 0.24
HOMER3-202ENST00000392351 DNAH5Q8TE73 4624 aa16.53■□□□□ 0.24
HOMER3-202ENST00000392351 IGHV3-64A0A075B6Q5 118 aa16.53■□□□□ 0.24
HOMER3-202ENST00000392351 ORAOV1Q8WV07 137 aa16.53■□□□□ 0.24
HOMER3-202ENST00000392351 IGLV5-45A0A087WSX0 123 aa16.52■□□□□ 0.24
HOMER3-202ENST00000392351 OR10D4PQ8NGN7 298 aa16.52■□□□□ 0.24
HOMER3-202ENST00000392351 SPAG11BQ08648 103 aa16.51■□□□□ 0.23
HOMER3-202ENST00000392351 LINC01561Q8N1V8 128 aa16.51■□□□□ 0.23
HOMER3-202ENST00000392351 PACRGQ96M98 296 aaPredicted RBP16.51■□□□□ 0.23
HOMER3-202ENST00000392351 SLPIP03973 132 aa16.51■□□□□ 0.23
HOMER3-202ENST00000392351 CNBPP62633 177 aaKnown RBP16.51■□□□□ 0.23
HOMER3-202ENST00000392351 S100A6P06703 90 aa16.5■□□□□ 0.23
HOMER3-202ENST00000392351 MAP1LC3CQ9BXW4 147 aa16.5■□□□□ 0.23
HOMER3-202ENST00000392351 MRPL35Q9NZE8 188 aaKnown RBP16.5■□□□□ 0.23
HOMER3-202ENST00000392351 C11orf86A6NJI1 115 aa16.49■□□□□ 0.23
HOMER3-202ENST00000392351 F8VRH5 84 aa16.49■□□□□ 0.23
HOMER3-202ENST00000392351 GCSHP23434 173 aa16.49■□□□□ 0.23
HOMER3-202ENST00000392351 ODF1Q14990 250 aa16.48■□□□□ 0.23
HOMER3-202ENST00000392351 LINC01620Q4KN68 170 aa16.48■□□□□ 0.23
HOMER3-202ENST00000392351 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.47■□□□□ 0.23
HOMER3-202ENST00000392351 ZNF22P17026 224 aaPredicted RBP16.47■□□□□ 0.23
HOMER3-202ENST00000392351 H3BRM9 83 aa16.47■□□□□ 0.23
HOMER3-202ENST00000392351 SMIM1B2RUZ4 78 aa16.46■□□□□ 0.23
HOMER3-202ENST00000392351 SPINK8P0C7L1 97 aa16.45■□□□□ 0.22
HOMER3-202ENST00000392351 DYNC1H1Q14204 4646 aaKnown RBP16.45■□□□□ 0.22
HOMER3-202ENST00000392351 TMEM170BQ5T4T1 132 aa16.44■□□□□ 0.22
HOMER3-202ENST00000392351 C9orf163Q8N9P6 203 aa16.44■□□□□ 0.22
HOMER3-202ENST00000392351 CAMK2N2Q96S95 79 aa16.44■□□□□ 0.22
HOMER3-202ENST00000392351 TOMM7Q9P0U1 55 aa16.44■□□□□ 0.22
HOMER3-202ENST00000392351 KRTAP10-1P60331 282 aa16.43■□□□□ 0.22
HOMER3-202ENST00000392351 SYCNQ0VAF6 134 aa16.43■□□□□ 0.22
HOMER3-202ENST00000392351 HIST3H2BBQ8N257 126 aa16.43■□□□□ 0.22
HOMER3-202ENST00000392351 C2orf48Q96LS8 159 aa16.43■□□□□ 0.22
HOMER3-202ENST00000392351 SYS1-DBNDD2H3BUS1 97 aa16.43■□□□□ 0.22
HOMER3-202ENST00000392351 KIAA0087Q14695 138 aa16.43■□□□□ 0.22
HOMER3-202ENST00000392351 CARD19Q96LW7 228 aa16.43■□□□□ 0.22
HOMER3-202ENST00000392351 PRSS2P07478 247 aa16.42■□□□□ 0.22
HOMER3-202ENST00000392351 PMCHL2Q9BQD1 86 aa16.42■□□□□ 0.22
HOMER3-202ENST00000392351 S100A2P29034 98 aa16.41■□□□□ 0.22
HOMER3-202ENST00000392351 SNRPEP62304 92 aaKnown RBP16.4■□□□□ 0.22
HOMER3-202ENST00000392351 Q6ZRU5 148 aa16.4■□□□□ 0.22
HOMER3-202ENST00000392351 Q8IZM0 81 aa16.4■□□□□ 0.22
HOMER3-202ENST00000392351 LRP1BQ9NZR2 4599 aa16.4■□□□□ 0.22
HOMER3-202ENST00000392351 C3orf79P0CE67 100 aa16.39■□□□□ 0.21
HOMER3-202ENST00000392351 NDUFA1O15239 70 aa16.38■□□□□ 0.21
HOMER3-202ENST00000392351 PLNP26678 52 aa16.38■□□□□ 0.21
HOMER3-202ENST00000392351 KRTDAPP60985 99 aa16.38■□□□□ 0.21
HOMER3-202ENST00000392351 C6orf226Q5I0X4 101 aa16.38■□□□□ 0.21
HOMER3-202ENST00000392351 F8WDY8 70 aa16.38■□□□□ 0.21
HOMER3-202ENST00000392351 DPM2O94777 84 aa16.38■□□□□ 0.21
HOMER3-202ENST00000392351 C2orf82Q6UX34 121 aa16.38■□□□□ 0.21
HOMER3-202ENST00000392351 HIST1H2BLQ99880 126 aa16.38■□□□□ 0.21
HOMER3-202ENST00000392351 PET117Q6UWS5 81 aa16.37■□□□□ 0.21
HOMER3-202ENST00000392351 COX7B2Q8TF08 81 aa16.37■□□□□ 0.21
HOMER3-202ENST00000392351 UNQ6190/PRO20217Q6UXQ8 127 aa16.36■□□□□ 0.21
HOMER3-202ENST00000392351 IGLV5-39A0A0G2JS06 123 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms