RNA–Protein interactions for RNA: ENST00000391942.6

ERCC2-202, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-202ENST00000391942 DNAH6Q9C0G6 4158 aa11.37□□□□□ -0.59
ERCC2-202ENST00000391942 GAGE12HA6NDE8 117 aa11.37□□□□□ -0.59
ERCC2-202ENST00000391942 LINC00242Q5T6M2 205 aa11.37□□□□□ -0.59
ERCC2-202ENST00000391942 SPATA12Q7Z6I5 190 aa11.37□□□□□ -0.59
ERCC2-202ENST00000391942 RMI2Q96E14 147 aa11.37□□□□□ -0.59
ERCC2-202ENST00000391942 PMCHL2Q9BQD1 86 aa11.37□□□□□ -0.59
ERCC2-202ENST00000391942 CHTOPQ9Y3Y2 248 aaKnown RBP11.37□□□□□ -0.59
ERCC2-202ENST00000391942 HYDINQ4G0P3 5121 aa11.37□□□□□ -0.59
ERCC2-202ENST00000391942 TRAV12-1A0A0B4J245 112 aa11.36□□□□□ -0.59
ERCC2-202ENST00000391942 SYS1-DBNDD2H3BUS1 97 aa11.36□□□□□ -0.59
ERCC2-202ENST00000391942 COX6A2Q02221 97 aa11.36□□□□□ -0.59
ERCC2-202ENST00000391942 C1orf134Q5TEV5 83 aa11.36□□□□□ -0.59
ERCC2-202ENST00000391942 ODF1Q14990 250 aa11.35□□□□□ -0.59
ERCC2-202ENST00000391942 KRTAP26-1Q6PEX3 210 aa11.35□□□□□ -0.59
ERCC2-202ENST00000391942 NFE4Q86UQ8 179 aa11.35□□□□□ -0.59
ERCC2-202ENST00000391942 MRPL35Q9NZE8 188 aaKnown RBP11.35□□□□□ -0.59
ERCC2-202ENST00000391942 IGLV4-69A0A075B6H9 119 aa11.34□□□□□ -0.59
ERCC2-202ENST00000391942 PSCAO43653 123 aa11.34□□□□□ -0.59
ERCC2-202ENST00000391942 TM2D2Q9BX73 214 aa11.34□□□□□ -0.59
ERCC2-202ENST00000391942 PRO1933Q9H354 126 aa11.34□□□□□ -0.59
ERCC2-202ENST00000391942 GEMIN7Q9H840 131 aaKnown RBP11.34□□□□□ -0.59
ERCC2-202ENST00000391942 SACSQ9NZJ4 4579 aa11.34□□□□□ -0.59
ERCC2-202ENST00000391942 FOXI1Q12951 378 aa11.33□□□□□ -0.6
ERCC2-202ENST00000391942 CD164L2Q6UWJ8 174 aa11.33□□□□□ -0.6
ERCC2-202ENST00000391942 Q6ZRN7 208 aaPredicted RBP11.33□□□□□ -0.6
ERCC2-202ENST00000391942 TINCRA0A1B0GVN0 87 aa11.32□□□□□ -0.6
ERCC2-202ENST00000391942 DLEU1O43261 78 aa11.32□□□□□ -0.6
ERCC2-202ENST00000391942 FAM19A3Q7Z5A8 133 aa11.32□□□□□ -0.6
ERCC2-202ENST00000391942 C5orf38Q86SI9 138 aa11.32□□□□□ -0.6
ERCC2-202ENST00000391942 MAPKAPK5-AS1Q8N8E1 139 aa11.32□□□□□ -0.6
ERCC2-202ENST00000391942 CHAC1Q9BUX1 264 aa11.32□□□□□ -0.6
ERCC2-202ENST00000391942 KMT2CQ8NEZ4 4911 aaKnown RBP11.32□□□□□ -0.6
ERCC2-202ENST00000391942 C11orf86A6NJI1 115 aa11.32□□□□□ -0.6
ERCC2-202ENST00000391942 F8VRH5 84 aa11.32□□□□□ -0.6
ERCC2-202ENST00000391942 IGLC3P0DOY3 106 aa11.32□□□□□ -0.6
ERCC2-202ENST00000391942 PET117Q6UWS5 81 aa11.32□□□□□ -0.6
ERCC2-202ENST00000391942 COX11Q9Y6N1 276 aa11.32□□□□□ -0.6
ERCC2-202ENST00000391942 HERVK_113P63121 156 aa11.31□□□□□ -0.6
ERCC2-202ENST00000391942 SEC11AP67812 179 aa11.31□□□□□ -0.6
ERCC2-202ENST00000391942 CDKN2A-AS1Q9UH64 79 aa11.31□□□□□ -0.6
ERCC2-202ENST00000391942 IGHV3OR16-9A0A0B4J2B5 98 aa11.3□□□□□ -0.6
ERCC2-202ENST00000391942 LECT2O14960 151 aa11.3□□□□□ -0.6
ERCC2-202ENST00000391942 CDPF1Q6NVV7 123 aa11.3□□□□□ -0.6
ERCC2-202ENST00000391942 COX7A2LO14548 114 aa11.29□□□□□ -0.6
ERCC2-202ENST00000391942 LINC01545Q5VT33 79 aa11.29□□□□□ -0.6
ERCC2-202ENST00000391942 RTL8CO15255 209 aa11.28□□□□□ -0.6
ERCC2-202ENST00000391942 DPM2O94777 84 aa11.28□□□□□ -0.6
ERCC2-202ENST00000391942 ZNF22P17026 224 aaPredicted RBP11.28□□□□□ -0.6
ERCC2-202ENST00000391942 PCP4P48539 62 aa11.28□□□□□ -0.6
ERCC2-202ENST00000391942 TMEM170BQ5T4T1 132 aa11.28□□□□□ -0.6
ERCC2-202ENST00000391942 RYR2Q92736 4967 aa11.28□□□□□ -0.6
ERCC2-202ENST00000391942 IGKCP01834 107 aa11.27□□□□□ -0.6
ERCC2-202ENST00000391942 MALP21145 153 aa11.27□□□□□ -0.6
ERCC2-202ENST00000391942 DNAH10Q8IVF4 4471 aa11.27□□□□□ -0.61
ERCC2-202ENST00000391942 IGLV5-45A0A087WSX0 123 aa11.26□□□□□ -0.61
ERCC2-202ENST00000391942 C20orf202A1L168 122 aa11.26□□□□□ -0.61
ERCC2-202ENST00000391942 PLNP26678 52 aa11.26□□□□□ -0.61
ERCC2-202ENST00000391942 WFDC2Q14508 124 aa11.26□□□□□ -0.61
ERCC2-202ENST00000391942 SNHG12Q9BXW3 62 aa11.26□□□□□ -0.61
ERCC2-202ENST00000391942 A0A087WZ39 114 aa11.25□□□□□ -0.61
ERCC2-202ENST00000391942 SPINK8P0C7L1 97 aa11.25□□□□□ -0.61
ERCC2-202ENST00000391942 ATOH7Q8N100 152 aa11.25□□□□□ -0.61
ERCC2-202ENST00000391942 USP17L23D6RBM5 183 aa11.25□□□□□ -0.61
ERCC2-202ENST00000391942 SCGB1D1O95968 90 aa11.25□□□□□ -0.61
ERCC2-202ENST00000391942 DNAH2Q9P225 4427 aa11.24□□□□□ -0.61
ERCC2-202ENST00000391942 IGHV3-64A0A075B6Q5 118 aa11.24□□□□□ -0.61
ERCC2-202ENST00000391942 H3BRM9 83 aa11.24□□□□□ -0.61
ERCC2-202ENST00000391942 C15orf56Q8N910 161 aa11.24□□□□□ -0.61
ERCC2-202ENST00000391942 LRCOL1A6NCL2 159 aa11.23□□□□□ -0.61
ERCC2-202ENST00000391942 EREGO14944 169 aa11.23□□□□□ -0.61
ERCC2-202ENST00000391942 TNP2Q05952 138 aa11.23□□□□□ -0.61
ERCC2-202ENST00000391942 HIGD2BQ4VC39 106 aa11.23□□□□□ -0.61
ERCC2-202ENST00000391942 COL5A1-AS1Q5SY13 56 aa11.23□□□□□ -0.61
ERCC2-202ENST00000391942 MIEN1Q9BRT3 115 aa11.23□□□□□ -0.61
ERCC2-202ENST00000391942 SMIM1B2RUZ4 78 aa11.22□□□□□ -0.61
ERCC2-202ENST00000391942 ORAOV1Q8WV07 137 aa11.22□□□□□ -0.61
ERCC2-202ENST00000391942 IGHV1-58A0A0C4DH39 117 aa11.21□□□□□ -0.61
ERCC2-202ENST00000391942 APOMO95445 188 aa11.21□□□□□ -0.61
ERCC2-202ENST00000391942 LINC00526Q96FQ7 95 aa11.21□□□□□ -0.61
ERCC2-202ENST00000391942 A0A087WTM6 91 aa11.2□□□□□ -0.62
ERCC2-202ENST00000391942 TMEM223A0PJW6 202 aa11.2□□□□□ -0.62
ERCC2-202ENST00000391942 CFAP161Q6P656 301 aa11.2□□□□□ -0.62
ERCC2-202ENST00000391942 TOMM7Q9P0U1 55 aa11.2□□□□□ -0.62
ERCC2-202ENST00000391942 FRAS1Q86XX4 4008 aa11.2□□□□□ -0.62
ERCC2-202ENST00000391942 hDV102S1A0JD36 115 aa11.19□□□□□ -0.62
ERCC2-202ENST00000391942 LINC01561Q8N1V8 128 aa11.19□□□□□ -0.62
ERCC2-202ENST00000391942 STPG4Q8N801 248 aa11.19□□□□□ -0.62
ERCC2-202ENST00000391942 SPAG11BQ08648 103 aa11.19□□□□□ -0.62
ERCC2-202ENST00000391942 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.17□□□□□ -0.62
ERCC2-202ENST00000391942 GVQW2A0A096LPI5 108 aaPredicted RBP11.17□□□□□ -0.62
ERCC2-202ENST00000391942 ZNF561-AS1K7EIQ3 104 aa11.17□□□□□ -0.62
ERCC2-202ENST00000391942 MAJINQ3KP22 176 aa11.17□□□□□ -0.62
ERCC2-202ENST00000391942 IGLV5-39A0A0G2JS06 123 aa11.16□□□□□ -0.62
ERCC2-202ENST00000391942 PRSS2P07478 247 aa11.16□□□□□ -0.62
ERCC2-202ENST00000391942 HERVK_113P61574 105 aa11.16□□□□□ -0.62
ERCC2-202ENST00000391942 Q8N814 137 aa11.16□□□□□ -0.62
ERCC2-202ENST00000391942 COX7B2Q8TF08 81 aa11.16□□□□□ -0.62
ERCC2-202ENST00000391942 C14orf177Q52M58 125 aa11.15□□□□□ -0.62
ERCC2-202ENST00000391942 RYR3Q15413 4870 aa11.15□□□□□ -0.62
ERCC2-202ENST00000391942 FUSP35637 526 aaKnown RBP eCLIP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms