RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 IGLC1P0CG04 106 aa-0.92□□□□□ -2.56
SNORA40.2-201ENST00000390847 UBA52P62987 128 aaKnown RBP-0.92□□□□□ -2.56
SNORA40.2-201ENST00000390847 PDZD2O15018 2839 aa-0.93□□□□□ -2.56
SNORA40.2-201ENST00000390847 AKAIN1P0CW23 69 aa-0.93□□□□□ -2.56
SNORA40.2-201ENST00000390847 S100A12P80511 92 aa-0.93□□□□□ -2.56
SNORA40.2-201ENST00000390847 URB1O60287 2271 aaKnown RBP-0.93□□□□□ -2.56
SNORA40.2-201ENST00000390847 NSD3Q9BZ95 1437 aa-0.93□□□□□ -2.56
SNORA40.2-201ENST00000390847 GAPVD1Q14C86 1478 aa-0.93□□□□□ -2.56
SNORA40.2-201ENST00000390847 TRBV7-4A0A0J9YYF1 115 aa-0.94□□□□□ -2.56
SNORA40.2-201ENST00000390847 K7EP13 123 aa-0.94□□□□□ -2.56
SNORA40.2-201ENST00000390847 WHAMMP3Q1A5X7 153 aa-0.94□□□□□ -2.56
SNORA40.2-201ENST00000390847 C10orf113Q5VZT2 155 aa-0.94□□□□□ -2.56
SNORA40.2-201ENST00000390847 FDCSPQ8NFU4 85 aa-0.94□□□□□ -2.56
SNORA40.2-201ENST00000390847 RAPGEF6Q8TEU7 1601 aa-0.94□□□□□ -2.56
SNORA40.2-201ENST00000390847 KTN1Q86UP2 1357 aaKnown RBP-0.95□□□□□ -2.56
SNORA40.2-201ENST00000390847 PHLPP1O60346 1717 aa-0.95□□□□□ -2.56
SNORA40.2-201ENST00000390847 OOSP1A8MZH6 123 aa-0.95□□□□□ -2.56
SNORA40.2-201ENST00000390847 ARL2-SNX15V9GYD0 113 aa-0.95□□□□□ -2.56
SNORA40.2-201ENST00000390847 KMT2CQ8NEZ4 4911 aaKnown RBP-0.95□□□□□ -2.56
SNORA40.2-201ENST00000390847 MAP1AP78559 2803 aaPredicted RBP-0.96□□□□□ -2.56
SNORA40.2-201ENST00000390847 PCLOQ9Y6V0 5065 aa-0.96□□□□□ -2.56
SNORA40.2-201ENST00000390847 CDC42SE2Q9NRR3 84 aa-0.96□□□□□ -2.56
SNORA40.2-201ENST00000390847 C9orf153Q5TBE3 101 aa-0.97□□□□□ -2.56
SNORA40.2-201ENST00000390847 FAM223AQ8IWN6 122 aa-0.97□□□□□ -2.56
SNORA40.2-201ENST00000390847 DEFB105AQ8NG35 78 aa-0.97□□□□□ -2.56
SNORA40.2-201ENST00000390847 PSME4Q14997 1843 aa-0.98□□□□□ -2.57
SNORA40.2-201ENST00000390847 UBE2L5PA0A1B0GUS4 154 aa-0.98□□□□□ -2.57
SNORA40.2-201ENST00000390847 UBE2L3P68036 154 aaKnown RBP-0.98□□□□□ -2.57
SNORA40.2-201ENST00000390847 C1orf54Q8WWF1 131 aa-0.98□□□□□ -2.57
SNORA40.2-201ENST00000390847 SPRR4Q96PI1 79 aa-0.98□□□□□ -2.57
SNORA40.2-201ENST00000390847 LINC00959A0A1B0GUT2 108 aa-0.99□□□□□ -2.57
SNORA40.2-201ENST00000390847 SYS1-DBNDD2H3BUS1 97 aa-0.99□□□□□ -2.57
SNORA40.2-201ENST00000390847 HMGN1P05114 100 aa-0.99□□□□□ -2.57
SNORA40.2-201ENST00000390847 GNG11P61952 73 aa-0.99□□□□□ -2.57
SNORA40.2-201ENST00000390847 KLK9Q2XQG4 91 aa-0.99□□□□□ -2.57
SNORA40.2-201ENST00000390847 PP6455Q8WZ26 134 aa-0.99□□□□□ -2.57
SNORA40.2-201ENST00000390847 NBEAL1Q6ZS30 2694 aa-0.99□□□□□ -2.57
SNORA40.2-201ENST00000390847 FOCADQ5VW36 1801 aa-0.99□□□□□ -2.57
SNORA40.2-201ENST00000390847 MYOM1P52179 1685 aa-1□□□□□ -2.57
SNORA40.2-201ENST00000390847 M0R2T5 61 aa-1□□□□□ -2.57
SNORA40.2-201ENST00000390847 LINC01600Q96MT4 127 aa-1□□□□□ -2.57
SNORA40.2-201ENST00000390847 SMG6Q86US8 1419 aaKnown RBP-1□□□□□ -2.57
SNORA40.2-201ENST00000390847 TULP4Q9NRJ4 1543 aa-1□□□□□ -2.57
SNORA40.2-201ENST00000390847 LRP1BQ9NZR2 4599 aa-1.01□□□□□ -2.57
SNORA40.2-201ENST00000390847 MYH7P12883 1935 aa-1.01□□□□□ -2.57
SNORA40.2-201ENST00000390847 CNOT1A5YKK6 2376 aaKnown RBP-1.01□□□□□ -2.57
SNORA40.2-201ENST00000390847 NEBP20929 6669 aa-1.02□□□□□ -2.57
SNORA40.2-201ENST00000390847 FAM24AA6NFZ4 105 aa-1.02□□□□□ -2.57
SNORA40.2-201ENST00000390847 ROCK2O75116 1388 aaKnown RBP-1.02□□□□□ -2.57
SNORA40.2-201ENST00000390847 SNAPC5O75971 98 aa-1.02□□□□□ -2.57
SNORA40.2-201ENST00000390847 COX8AP10176 69 aa-1.02□□□□□ -2.57
SNORA40.2-201ENST00000390847 KDM5AP29375 1690 aaKnown RBP-1.02□□□□□ -2.57
SNORA40.2-201ENST00000390847 MAGI1Q96QZ7 1491 aaPredicted RBP-1.02□□□□□ -2.57
SNORA40.2-201ENST00000390847 MANBALQ9NQG1 85 aa-1.02□□□□□ -2.57
SNORA40.2-201ENST00000390847 A2ML1A8K2U0 1454 aa-1.03□□□□□ -2.57
SNORA40.2-201ENST00000390847 FAM167A-AS1Q96KT0 104 aa-1.03□□□□□ -2.57
SNORA40.2-201ENST00000390847 PRO1933Q9H354 126 aa-1.03□□□□□ -2.57
SNORA40.2-201ENST00000390847 BTAF1O14981 1849 aa-1.03□□□□□ -2.57
SNORA40.2-201ENST00000390847 DNAJC13O75165 2243 aa-1.04□□□□□ -2.58
SNORA40.2-201ENST00000390847 STAB2Q8WWQ8 2551 aa-1.04□□□□□ -2.58
SNORA40.2-201ENST00000390847 F6UZH7 168 aa-1.04□□□□□ -2.58
SNORA40.2-201ENST00000390847 ATP5EP56381 51 aaPredicted RBP-1.04□□□□□ -2.58
SNORA40.2-201ENST00000390847 SFTA2Q6UW10 78 aa-1.04□□□□□ -2.58
SNORA40.2-201ENST00000390847 USMG5Q96IX5 58 aa-1.04□□□□□ -2.58
SNORA40.2-201ENST00000390847 DPH3P1Q9H4G8 78 aa-1.04□□□□□ -2.58
SNORA40.2-201ENST00000390847 ROBO1Q9Y6N7 1651 aa-1.05□□□□□ -2.58
SNORA40.2-201ENST00000390847 ARHGEF5Q12774 1597 aa-1.05□□□□□ -2.58
SNORA40.2-201ENST00000390847 SETBP1Q9Y6X0 1596 aa-1.05□□□□□ -2.58
SNORA40.2-201ENST00000390847 HMGXB3Q12766 1538 aa-1.05□□□□□ -2.58
SNORA40.2-201ENST00000390847 A0A1B0GWA3 101 aa-1.06□□□□□ -2.58
SNORA40.2-201ENST00000390847 TRAPPC2P0DI81 140 aa-1.06□□□□□ -2.58
SNORA40.2-201ENST00000390847 TRAPPC2BP0DI82 140 aa-1.06□□□□□ -2.58
SNORA40.2-201ENST00000390847 Q0VG73 95 aa-1.06□□□□□ -2.58
SNORA40.2-201ENST00000390847 PRKDCP78527 4128 aaKnown RBP-1.07□□□□□ -2.58
SNORA40.2-201ENST00000390847 COX6CP09669 75 aa-1.07□□□□□ -2.58
SNORA40.2-201ENST00000390847 IQSEC2Q5JU85 1478 aa-1.07□□□□□ -2.58
SNORA40.2-201ENST00000390847 TET3O43151 1660 aa-1.07□□□□□ -2.58
SNORA40.2-201ENST00000390847 QRICH2Q9H0J4 1663 aa-1.07□□□□□ -2.58
SNORA40.2-201ENST00000390847 SHROOM2Q13796 1616 aa-1.07□□□□□ -2.58
SNORA40.2-201ENST00000390847 EHBP1L1Q8N3D4 1523 aa-1.08□□□□□ -2.58
SNORA40.2-201ENST00000390847 LCN9Q8WX39 176 aa-1.08□□□□□ -2.58
SNORA40.2-201ENST00000390847 APLNQ9ULZ1 77 aa-1.08□□□□□ -2.58
SNORA40.2-201ENST00000390847 HERC1Q15751 4861 aa-1.08□□□□□ -2.58
SNORA40.2-201ENST00000390847 SCAPERQ9BY12 1400 aa-1.09□□□□□ -2.58
SNORA40.2-201ENST00000390847 RPL13AP3Q6NVV1 102 aa-1.1□□□□□ -2.59
SNORA40.2-201ENST00000390847 SVBPQ8N300 66 aa-1.1□□□□□ -2.59
SNORA40.2-201ENST00000390847 KIAA0556O60303 1618 aa-1.11□□□□□ -2.59
SNORA40.2-201ENST00000390847 C1orf167Q5SNV9 1468 aa-1.11□□□□□ -2.59
SNORA40.2-201ENST00000390847 NAP1L6A6NFF2 107 aa-1.11□□□□□ -2.59
SNORA40.2-201ENST00000390847 FAM223BA6NKX1 122 aa-1.11□□□□□ -2.59
SNORA40.2-201ENST00000390847 UBE2D3P61077 147 aa-1.11□□□□□ -2.59
SNORA40.2-201ENST00000390847 UBE2D2P62837 147 aa-1.11□□□□□ -2.59
SNORA40.2-201ENST00000390847 C12orf57Q99622 126 aa-1.11□□□□□ -2.59
SNORA40.2-201ENST00000390847 PRO1854Q9UHT4 67 aa-1.11□□□□□ -2.59
SNORA40.2-201ENST00000390847 CPSF4LA6NMK7 179 aaKnown RBP-1.12□□□□□ -2.59
SNORA40.2-201ENST00000390847 SEC11AP67812 179 aa-1.12□□□□□ -2.59
SNORA40.2-201ENST00000390847 ZFHX3Q15911 3703 aa-1.13□□□□□ -2.59
SNORA40.2-201ENST00000390847 IER3IP1Q9Y5U9 82 aa-1.13□□□□□ -2.59
SNORA40.2-201ENST00000390847 TCHHQ07283 1943 aa-1.13□□□□□ -2.59
SNORA40.2-201ENST00000390847 ADGRL2O95490 1459 aa-1.14□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms