RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 CYSRT1A8MQ03 144 aa12.71□□□□□ -0.38
ACTN4-202ENST00000390009 PAX4O43316 350 aa12.71□□□□□ -0.38
ACTN4-202ENST00000390009 ZFAND6Q6FIF0 208 aa12.71□□□□□ -0.38
ACTN4-202ENST00000390009 STAB1Q9NY15 2570 aa12.7□□□□□ -0.38
ACTN4-202ENST00000390009 IGLV4-60A0A075B6I1 120 aa12.7□□□□□ -0.38
ACTN4-202ENST00000390009 PRIMA1Q86XR5 153 aa12.69□□□□□ -0.38
ACTN4-202ENST00000390009 IGLV5-39A0A0G2JS06 123 aa12.68□□□□□ -0.38
ACTN4-202ENST00000390009 EGFEM1PQ0D2K5 195 aa12.68□□□□□ -0.38
ACTN4-202ENST00000390009 LITAFQ99732 161 aa12.68□□□□□ -0.38
ACTN4-202ENST00000390009 A0A096LPF7 62 aa12.67□□□□□ -0.38
ACTN4-202ENST00000390009 SMIM1B2RUZ4 78 aa12.67□□□□□ -0.38
ACTN4-202ENST00000390009 F8W1H4 67 aa12.67□□□□□ -0.38
ACTN4-202ENST00000390009 APOMO95445 188 aa12.67□□□□□ -0.38
ACTN4-202ENST00000390009 ATP5G1P05496 136 aa12.67□□□□□ -0.38
ACTN4-202ENST00000390009 SPART-AS1P0CW21 52 aa12.67□□□□□ -0.38
ACTN4-202ENST00000390009 F5H768 121 aa12.66□□□□□ -0.38
ACTN4-202ENST00000390009 SCGB1A1P11684 91 aa12.65□□□□□ -0.38
ACTN4-202ENST00000390009 WFDC2Q14508 124 aa12.65□□□□□ -0.38
ACTN4-202ENST00000390009 MUSTN1Q8IVN3 82 aa12.65□□□□□ -0.38
ACTN4-202ENST00000390009 PGPEP1Q9NXJ5 209 aa12.65□□□□□ -0.38
ACTN4-202ENST00000390009 CMYA5Q8N3K9 4069 aa12.65□□□□□ -0.38
ACTN4-202ENST00000390009 IGKV3OR2-268A0A0C4DH90 116 aa12.65□□□□□ -0.38
ACTN4-202ENST00000390009 NDUFA1O15239 70 aa12.65□□□□□ -0.38
ACTN4-202ENST00000390009 CFC1BP0CG36 223 aa12.65□□□□□ -0.38
ACTN4-202ENST00000390009 CFC1P0CG37 223 aa12.65□□□□□ -0.38
ACTN4-202ENST00000390009 SIGMAR1Q99720 223 aa12.65□□□□□ -0.38
ACTN4-202ENST00000390009 TRAV26-1A0A087WT03 109 aa12.64□□□□□ -0.39
ACTN4-202ENST00000390009 A4D1N5 150 aa12.64□□□□□ -0.39
ACTN4-202ENST00000390009 H3BMG7 143 aa12.64□□□□□ -0.39
ACTN4-202ENST00000390009 J3QR89 54 aa12.63□□□□□ -0.39
ACTN4-202ENST00000390009 ADAMTSL4-AS1Q5T5F5 129 aa12.63□□□□□ -0.39
ACTN4-202ENST00000390009 SPANXDQ9BXN6 97 aa12.63□□□□□ -0.39
ACTN4-202ENST00000390009 SPANXCQ9NY87 97 aa12.63□□□□□ -0.39
ACTN4-202ENST00000390009 MAST4O15021 2626 aa12.63□□□□□ -0.39
ACTN4-202ENST00000390009 GAGE12HA6NDE8 117 aa12.62□□□□□ -0.39
ACTN4-202ENST00000390009 TMEM262E9PQX1 116 aa12.62□□□□□ -0.39
ACTN4-202ENST00000390009 PKD1L1Q8TDX9 2849 aa12.62□□□□□ -0.39
ACTN4-202ENST00000390009 Q9H8V8 135 aa12.62□□□□□ -0.39
ACTN4-202ENST00000390009 A0A1B0GUV1 79 aa12.61□□□□□ -0.39
ACTN4-202ENST00000390009 TSPAN13O95857 204 aa12.61□□□□□ -0.39
ACTN4-202ENST00000390009 HTN3P15516 51 aa12.61□□□□□ -0.39
ACTN4-202ENST00000390009 SPATA25Q9BR10 227 aa12.61□□□□□ -0.39
ACTN4-202ENST00000390009 TIMM17BO60830 172 aa12.61□□□□□ -0.39
ACTN4-202ENST00000390009 PRSS2P07478 247 aa12.61□□□□□ -0.39
ACTN4-202ENST00000390009 ETDBQ3ZM63 59 aa12.61□□□□□ -0.39
ACTN4-202ENST00000390009 SH2D6Q7Z4S9 175 aa12.61□□□□□ -0.39
ACTN4-202ENST00000390009 MIAQ16674 131 aa12.6□□□□□ -0.39
ACTN4-202ENST00000390009 RETNQ9HD89 108 aa12.6□□□□□ -0.39
ACTN4-202ENST00000390009 PRO1854Q9UHT4 67 aa12.59□□□□□ -0.39
ACTN4-202ENST00000390009 IGHV3OR16-9A0A0B4J2B5 98 aa12.58□□□□□ -0.4
ACTN4-202ENST00000390009 LINC00959A0A1B0GUT2 108 aa12.58□□□□□ -0.4
ACTN4-202ENST00000390009 EIF4EBP3O60516 100 aaPredicted RBP12.58□□□□□ -0.4
ACTN4-202ENST00000390009 PRO0461Q9UI25 63 aa12.58□□□□□ -0.4
ACTN4-202ENST00000390009 MTURNQ8N3F0 131 aa12.58□□□□□ -0.4
ACTN4-202ENST00000390009 ZNF625Q96I27 306 aaPredicted RBP12.58□□□□□ -0.4
ACTN4-202ENST00000390009 ANK2Q01484 3957 aa12.57□□□□□ -0.4
ACTN4-202ENST00000390009 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.57□□□□□ -0.4
ACTN4-202ENST00000390009 A0A0B4J2C4 111 aa12.57□□□□□ -0.4
ACTN4-202ENST00000390009 MRPL23Q16540 153 aaKnown RBP12.57□□□□□ -0.4
ACTN4-202ENST00000390009 NPC2P61916 151 aa12.56□□□□□ -0.4
ACTN4-202ENST00000390009 CIRBPQ14011 172 aaKnown RBP12.56□□□□□ -0.4
ACTN4-202ENST00000390009 DAND5Q8N907 189 aa12.56□□□□□ -0.4
ACTN4-202ENST00000390009 SFTA2Q6UW10 78 aa12.55□□□□□ -0.4
ACTN4-202ENST00000390009 ICOSQ9Y6W8 199 aa12.55□□□□□ -0.4
ACTN4-202ENST00000390009 A0A087WZ39 114 aa12.54□□□□□ -0.4
ACTN4-202ENST00000390009 LOC107984156A0A0G2JMH3 177 aa12.54□□□□□ -0.4
ACTN4-202ENST00000390009 ARL17AQ8IVW1 177 aa12.54□□□□□ -0.4
ACTN4-202ENST00000390009 COX7B2Q8TF08 81 aa12.54□□□□□ -0.4
ACTN4-202ENST00000390009 COL6A5A8TX70 2615 aa12.53□□□□□ -0.4
ACTN4-202ENST00000390009 A0A1B0GV72 72 aa12.53□□□□□ -0.4
ACTN4-202ENST00000390009 IFITM1P13164 125 aa12.53□□□□□ -0.4
ACTN4-202ENST00000390009 HERV-K104P63124 156 aa12.53□□□□□ -0.4
ACTN4-202ENST00000390009 SS18Q15532 418 aa12.53□□□□□ -0.4
ACTN4-202ENST00000390009 CLPSL2Q6UWE3 100 aa12.53□□□□□ -0.4
ACTN4-202ENST00000390009 IGHV3-33P01772 117 aa12.53□□□□□ -0.4
ACTN4-202ENST00000390009 C5orf38Q86SI9 138 aa12.53□□□□□ -0.4
ACTN4-202ENST00000390009 MEIG1Q5JSS6 88 aa12.52□□□□□ -0.4
ACTN4-202ENST00000390009 TOMM7Q9P0U1 55 aa12.52□□□□□ -0.4
ACTN4-202ENST00000390009 DNAH3Q8TD57 4116 aa12.52□□□□□ -0.41
ACTN4-202ENST00000390009 A0A0U1RRA0 63 aa12.52□□□□□ -0.41
ACTN4-202ENST00000390009 XCL1P47992 114 aa12.52□□□□□ -0.41
ACTN4-202ENST00000390009 LINC00269Q8N2A0 174 aa12.51□□□□□ -0.41
ACTN4-202ENST00000390009 Q8N3U1 123 aa12.51□□□□□ -0.41
ACTN4-202ENST00000390009 ERG28Q9UKR5 140 aa12.51□□□□□ -0.41
ACTN4-202ENST00000390009 LELP1Q5T871 98 aa12.5□□□□□ -0.41
ACTN4-202ENST00000390009 LYRM7Q5U5X0 104 aa12.5□□□□□ -0.41
ACTN4-202ENST00000390009 LINC00308Q8TCZ7 52 aa12.5□□□□□ -0.41
ACTN4-202ENST00000390009 C11orf68Q9H3H3 251 aaKnown RBP12.5□□□□□ -0.41
ACTN4-202ENST00000390009 H7C2G1 150 aa12.49□□□□□ -0.41
ACTN4-202ENST00000390009 ANGP03950 147 aaKnown RBP12.49□□□□□ -0.41
ACTN4-202ENST00000390009 FOXI1Q12951 378 aa12.47□□□□□ -0.41
ACTN4-202ENST00000390009 PSMB2P49721 201 aa12.47□□□□□ -0.41
ACTN4-202ENST00000390009 REG3AQ06141 175 aa12.47□□□□□ -0.41
ACTN4-202ENST00000390009 Q1RN00 199 aa12.47□□□□□ -0.41
ACTN4-202ENST00000390009 Q6ZTC4 211 aa12.47□□□□□ -0.41
ACTN4-202ENST00000390009 SMCPP49901 116 aaPredicted RBP12.46□□□□□ -0.41
ACTN4-202ENST00000390009 SCGB1C2P0DMR2 95 aa12.46□□□□□ -0.42
ACTN4-202ENST00000390009 SOSTDC1Q6X4U4 206 aa12.46□□□□□ -0.42
ACTN4-202ENST00000390009 COPS9Q8WXC6 57 aa12.46□□□□□ -0.42
ACTN4-202ENST00000390009 A0A0J9YWU9 116 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms