RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 PAPPA-AS1Q5QFB9 102 aa7.03□□□□□ -1.28
LTN1-203ENST00000389195 HIGD1BQ9P298 99 aa7.03□□□□□ -1.28
LTN1-203ENST00000389195 NDUFA12Q9UI09 145 aa7.03□□□□□ -1.28
LTN1-203ENST00000389195 TINCRA0A1B0GVN0 87 aa7.03□□□□□ -1.28
LTN1-203ENST00000389195 SMIM9A6NGZ8 99 aa7.03□□□□□ -1.28
LTN1-203ENST00000389195 LEPROTO15243 131 aa7.03□□□□□ -1.28
LTN1-203ENST00000389195 SMIM13P0DJ93 91 aa7.03□□□□□ -1.28
LTN1-203ENST00000389195 IGHV1-58A0A0C4DH39 117 aa7.02□□□□□ -1.29
LTN1-203ENST00000389195 A0A0J9YXY3 114 aa7.02□□□□□ -1.29
LTN1-203ENST00000389195 A6NDN8 102 aa7.02□□□□□ -1.29
LTN1-203ENST00000389195 SPART-AS1P0CW21 52 aa7.02□□□□□ -1.29
LTN1-203ENST00000389195 SEC11AP67812 179 aa7.02□□□□□ -1.29
LTN1-203ENST00000389195 LINC00269Q8N2A0 174 aa7.02□□□□□ -1.29
LTN1-203ENST00000389195 LINC00526Q96FQ7 95 aa7.02□□□□□ -1.29
LTN1-203ENST00000389195 TM2D2Q9BX73 214 aa7.02□□□□□ -1.29
LTN1-203ENST00000389195 WIPF1O43516 503 aa7.02□□□□□ -1.29
LTN1-203ENST00000389195 RBX1P62877 108 aa7.02□□□□□ -1.29
LTN1-203ENST00000389195 MUSTN1Q8IVN3 82 aa7.02□□□□□ -1.29
LTN1-203ENST00000389195 ATP5G1P05496 136 aa7.01□□□□□ -1.29
LTN1-203ENST00000389195 MIFP14174 115 aa7.01□□□□□ -1.29
LTN1-203ENST00000389195 Q9H8V8 135 aa7.01□□□□□ -1.29
LTN1-203ENST00000389195 LINC01549A6NIU2 74 aa7.01□□□□□ -1.29
LTN1-203ENST00000389195 LYRM9A8MSI8 78 aa7.01□□□□□ -1.29
LTN1-203ENST00000389195 IGHV3-30P01768 117 aa7.01□□□□□ -1.29
LTN1-203ENST00000389195 IGHV3-30-5P0DP03 117 aa7.01□□□□□ -1.29
LTN1-203ENST00000389195 DNAH7Q8WXX0 4024 aa7.01□□□□□ -1.29
LTN1-203ENST00000389195 C9orf118A6NHY6 69 aa7□□□□□ -1.29
LTN1-203ENST00000389195 SMIM1B2RUZ4 78 aa7□□□□□ -1.29
LTN1-203ENST00000389195 EGFEM1PQ0D2K5 195 aa7□□□□□ -1.29
LTN1-203ENST00000389195 SAMD5Q5TGI4 173 aa7□□□□□ -1.29
LTN1-203ENST00000389195 GTSF1LQ9H1H1 148 aa7□□□□□ -1.29
LTN1-203ENST00000389195 A4D1N5 150 aa7□□□□□ -1.29
LTN1-203ENST00000389195 H3BRM9 83 aa7□□□□□ -1.29
LTN1-203ENST00000389195 UBE2V1Q13404 147 aa7□□□□□ -1.29
LTN1-203ENST00000389195 IGHV3-33P01772 117 aa6.99□□□□□ -1.29
LTN1-203ENST00000389195 ANGP03950 147 aaKnown RBP6.99□□□□□ -1.29
LTN1-203ENST00000389195 CFC1BP0CG36 223 aa6.99□□□□□ -1.29
LTN1-203ENST00000389195 CFC1P0CG37 223 aa6.99□□□□□ -1.29
LTN1-203ENST00000389195 PGPEP1Q9NXJ5 209 aa6.99□□□□□ -1.29
LTN1-203ENST00000389195 LITAFQ99732 161 aa6.99□□□□□ -1.29
LTN1-203ENST00000389195 GAGE10A6NGK3 116 aa6.98□□□□□ -1.29
LTN1-203ENST00000389195 IGLL5B9A064 214 aa6.98□□□□□ -1.29
LTN1-203ENST00000389195 K7EIL1 84 aa6.98□□□□□ -1.29
LTN1-203ENST00000389195 C2orf82Q6UX34 121 aa6.98□□□□□ -1.29
LTN1-203ENST00000389195 TGP01266 2768 aa6.98□□□□□ -1.29
LTN1-203ENST00000389195 PRKDCP78527 4128 aaKnown RBP6.98□□□□□ -1.29
LTN1-203ENST00000389195 A0A1W2PPM0 123 aa6.98□□□□□ -1.29
LTN1-203ENST00000389195 LINC00959A0A1B0GUT2 108 aa6.97□□□□□ -1.29
LTN1-203ENST00000389195 HERVK_113P63121 156 aa6.97□□□□□ -1.29
LTN1-203ENST00000389195 SPCS1Q9Y6A9 102 aa6.97□□□□□ -1.29
LTN1-203ENST00000389195 LOC107984156A0A0G2JMH3 177 aa6.97□□□□□ -1.29
LTN1-203ENST00000389195 H3BMG7 143 aa6.97□□□□□ -1.29
LTN1-203ENST00000389195 ARL17AQ8IVW1 177 aa6.97□□□□□ -1.29
LTN1-203ENST00000389195 KLK12Q9UKR0 248 aa6.97□□□□□ -1.29
LTN1-203ENST00000389195 CSDC2Q9Y534 153 aaKnown RBP6.97□□□□□ -1.29
LTN1-203ENST00000389195 MEGF8Q7Z7M0 2845 aa6.97□□□□□ -1.29
LTN1-203ENST00000389195 DNAH10Q8IVF4 4471 aa6.96□□□□□ -1.29
LTN1-203ENST00000389195 TIRAPP58753 221 aa6.96□□□□□ -1.29
LTN1-203ENST00000389195 KPRPQ5T749 579 aaPredicted RBP6.96□□□□□ -1.29
LTN1-203ENST00000389195 WFDC10BQ8IUB3 73 aa6.96□□□□□ -1.29
LTN1-203ENST00000389195 PFN2P35080 140 aa6.96□□□□□ -1.3
LTN1-203ENST00000389195 DNAH9Q9NYC9 4486 aa6.95□□□□□ -1.3
LTN1-203ENST00000389195 IGLV5-45A0A087WSX0 123 aa6.95□□□□□ -1.3
LTN1-203ENST00000389195 IGHV3OR16-9A0A0B4J2B5 98 aa6.95□□□□□ -1.3
LTN1-203ENST00000389195 ZFAND6Q6FIF0 208 aa6.95□□□□□ -1.3
LTN1-203ENST00000389195 MEIG1Q5JSS6 88 aa6.95□□□□□ -1.3
LTN1-203ENST00000389195 TSPAN13O95857 204 aa6.94□□□□□ -1.3
LTN1-203ENST00000389195 C9orf116Q5BN46 136 aaPredicted RBP6.94□□□□□ -1.3
LTN1-203ENST00000389195 LYPD5Q6UWN5 251 aa6.94□□□□□ -1.3
LTN1-203ENST00000389195 SOSTDC1Q6X4U4 206 aa6.94□□□□□ -1.3
LTN1-203ENST00000389195 IGLV5-39A0A0G2JS06 123 aa6.94□□□□□ -1.3
LTN1-203ENST00000389195 FABP2P12104 132 aa6.93□□□□□ -1.3
LTN1-203ENST00000389195 REG3AQ06141 175 aa6.93□□□□□ -1.3
LTN1-203ENST00000389195 MRPL23Q16540 153 aaKnown RBP6.93□□□□□ -1.3
LTN1-203ENST00000389195 C11orf45Q8TAV5 145 aa6.93□□□□□ -1.3
LTN1-203ENST00000389195 DEFB131BA0A096LNP1 70 aa6.93□□□□□ -1.3
LTN1-203ENST00000389195 TAL2Q16559 108 aa6.93□□□□□ -1.3
LTN1-203ENST00000389195 ESRGQ1W209 222 aa6.93□□□□□ -1.3
LTN1-203ENST00000389195 C6orf223Q8N319 242 aa6.93□□□□□ -1.3
LTN1-203ENST00000389195 CIDEAO60543 219 aa6.92□□□□□ -1.3
LTN1-203ENST00000389195 ICOSQ9Y6W8 199 aa6.92□□□□□ -1.3
LTN1-203ENST00000389195 CHCHD10Q8WYQ3 142 aaPredicted RBP6.92□□□□□ -1.3
LTN1-203ENST00000389195 UBE2WQ96B02 151 aa6.92□□□□□ -1.3
LTN1-203ENST00000389195 K7EP34 96 aa6.92□□□□□ -1.3
LTN1-203ENST00000389195 PSMB2P49721 201 aa6.92□□□□□ -1.3
LTN1-203ENST00000389195 TMEM238C9JI98 176 aa6.91□□□□□ -1.3
LTN1-203ENST00000389195 NDUFA1O15239 70 aa6.91□□□□□ -1.3
LTN1-203ENST00000389195 WFDC2Q14508 124 aa6.91□□□□□ -1.3
LTN1-203ENST00000389195 Q1RN00 199 aa6.91□□□□□ -1.3
LTN1-203ENST00000389195 COX7B2Q8TF08 81 aa6.91□□□□□ -1.3
LTN1-203ENST00000389195 SPANXB1Q9NS25 103 aaPredicted RBP6.91□□□□□ -1.3
LTN1-203ENST00000389195 PRR3P79522 188 aaKnown RBP6.91□□□□□ -1.3
LTN1-203ENST00000389195 C6orf226Q5I0X4 101 aa6.91□□□□□ -1.3
LTN1-203ENST00000389195 A0A1B0GWB2 263 aa6.9□□□□□ -1.31
LTN1-203ENST00000389195 SCGB1C2P0DMR2 95 aa6.9□□□□□ -1.31
LTN1-203ENST00000389195 LINC00158P58513 81 aa6.9□□□□□ -1.31
LTN1-203ENST00000389195 SS18Q15532 418 aa6.9□□□□□ -1.31
LTN1-203ENST00000389195 ENHOQ6UWT2 76 aa6.9□□□□□ -1.31
LTN1-203ENST00000389195 SH2D6Q7Z4S9 175 aa6.9□□□□□ -1.31
LTN1-203ENST00000389195 MIR7-3HGQ8N6C7 128 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms