RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 URB2Q14146 1524 aaKnown RBP-0.23□□□□□ -2.45
RNU6-39P-201ENST00000384344 ERICH3Q5RHP9 1530 aa-0.23□□□□□ -2.45
RNU6-39P-201ENST00000384344 ZNF142P52746 1687 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-39P-201ENST00000384344 QSER1Q2KHR3 1735 aa-0.23□□□□□ -2.45
RNU6-39P-201ENST00000384344 MON2Q7Z3U7 1717 aa-0.23□□□□□ -2.45
RNU6-39P-201ENST00000384344 XRN1Q8IZH2 1706 aaKnown RBP-0.23□□□□□ -2.45
RNU6-39P-201ENST00000384344 GOLGA4Q13439 2230 aaKnown RBP-0.23□□□□□ -2.45
RNU6-39P-201ENST00000384344 TRAV17A0A0B4J275 112 aa-0.23□□□□□ -2.45
RNU6-39P-201ENST00000384344 ZNF670-ZNF695F2Z2N8 137 aa-0.23□□□□□ -2.45
RNU6-39P-201ENST00000384344 HIST1H1BP16401 226 aaKnown RBP-0.23□□□□□ -2.45
RNU6-39P-201ENST00000384344 MYH3P11055 1940 aa-0.23□□□□□ -2.45
RNU6-39P-201ENST00000384344 NSD3Q9BZ95 1437 aa-0.23□□□□□ -2.45
RNU6-39P-201ENST00000384344 NLRP1Q9C000 1473 aa-0.23□□□□□ -2.45
RNU6-39P-201ENST00000384344 ABCC1P33527 1531 aa-0.23□□□□□ -2.45
RNU6-39P-201ENST00000384344 AGLP35573 1532 aa-0.23□□□□□ -2.45
RNU6-39P-201ENST00000384344 KDM3BQ7LBC6 1761 aa-0.24□□□□□ -2.45
RNU6-39P-201ENST00000384344 PHIPQ8WWQ0 1821 aa-0.24□□□□□ -2.45
RNU6-39P-201ENST00000384344 IFITM1P13164 125 aa-0.24□□□□□ -2.45
RNU6-39P-201ENST00000384344 GNG10P50151 68 aa-0.24□□□□□ -2.45
RNU6-39P-201ENST00000384344 OVOS2A0A0G2JMS6 1433 aa-0.24□□□□□ -2.45
RNU6-39P-201ENST00000384344 OVOS2A0A0J9YW53 1432 aa-0.24□□□□□ -2.45
RNU6-39P-201ENST00000384344 OVOS2Q6IE36 1432 aa-0.24□□□□□ -2.45
RNU6-39P-201ENST00000384344 ATP7AQ04656 1500 aa-0.24□□□□□ -2.45
RNU6-39P-201ENST00000384344 LMTK2Q8IWU2 1503 aa-0.24□□□□□ -2.45
RNU6-39P-201ENST00000384344 ALS2Q96Q42 1657 aa-0.24□□□□□ -2.45
RNU6-39P-201ENST00000384344 TIAM2Q8IVF5 1701 aa-0.24□□□□□ -2.45
RNU6-39P-201ENST00000384344 SIPA1L3O60292 1781 aaPredicted RBP-0.24□□□□□ -2.45
RNU6-39P-201ENST00000384344 HAMPP81172 84 aa-0.25□□□□□ -2.45
RNU6-39P-201ENST00000384344 PLGLB1Q02325 96 aa-0.25□□□□□ -2.45
RNU6-39P-201ENST00000384344 TMEM35BQ8NCS4 154 aa-0.25□□□□□ -2.45
RNU6-39P-201ENST00000384344 CCDC115Q96NT0 180 aa-0.25□□□□□ -2.45
RNU6-39P-201ENST00000384344 TAS2R8Q9NYW2 309 aa-0.25□□□□□ -2.45
RNU6-39P-201ENST00000384344 METTL1Q9UBP6 276 aaKnown RBP-0.25□□□□□ -2.45
RNU6-39P-201ENST00000384344 V9GYQ6 96 aa-0.25□□□□□ -2.45
RNU6-39P-201ENST00000384344 DAPK1P53355 1430 aa-0.25□□□□□ -2.45
RNU6-39P-201ENST00000384344 CNTLNQ9NXG0 1405 aa-0.25□□□□□ -2.45
RNU6-39P-201ENST00000384344 RRBP1Q9P2E9 1410 aaKnown RBP-0.25□□□□□ -2.45
RNU6-39P-201ENST00000384344 ABCC6O95255 1503 aa-0.25□□□□□ -2.45
RNU6-39P-201ENST00000384344 NRAPQ86VF7 1730 aa-0.25□□□□□ -2.45
RNU6-39P-201ENST00000384344 NRXN2Q9P2S2 1712 aa-0.25□□□□□ -2.45
RNU6-39P-201ENST00000384344 ZNF236Q9UL36 1845 aa-0.25□□□□□ -2.45
RNU6-39P-201ENST00000384344 ARFGEF1Q9Y6D6 1849 aa-0.26□□□□□ -2.45
RNU6-39P-201ENST00000384344 DDX60LQ5H9U9 1706 aaKnown RBP-0.26□□□□□ -2.45
RNU6-39P-201ENST00000384344 RICTORQ6R327 1708 aa-0.26□□□□□ -2.45
RNU6-39P-201ENST00000384344 ABCA5Q8WWZ7 1642 aa-0.26□□□□□ -2.45
RNU6-39P-201ENST00000384344 INO80Q9ULG1 1556 aaPredicted RBP-0.26□□□□□ -2.45
RNU6-39P-201ENST00000384344 TRAV2A0A0B4J234 112 aa-0.26□□□□□ -2.45
RNU6-39P-201ENST00000384344 A0A1B0GV72 72 aa-0.26□□□□□ -2.45
RNU6-39P-201ENST00000384344 RBAKDNA6NC62 111 aa-0.26□□□□□ -2.45
RNU6-39P-201ENST00000384344 SLC25A5P05141 298 aaKnown RBP-0.26□□□□□ -2.45
RNU6-39P-201ENST00000384344 RPL7P18124 248 aaKnown RBP-0.26□□□□□ -2.45
RNU6-39P-201ENST00000384344 EMX2Q04743 252 aa-0.26□□□□□ -2.45
RNU6-39P-201ENST00000384344 HSD17B12Q53GQ0 312 aa-0.26□□□□□ -2.45
RNU6-39P-201ENST00000384344 SAMD13Q5VXD3 122 aa-0.26□□□□□ -2.45
RNU6-39P-201ENST00000384344 TOMM20LQ6UXN7 152 aa-0.26□□□□□ -2.45
RNU6-39P-201ENST00000384344 DPH3P1Q9H4G8 78 aa-0.26□□□□□ -2.45
RNU6-39P-201ENST00000384344 DLEC1Q9Y238 1755 aa-0.27□□□□□ -2.45
RNU6-39P-201ENST00000384344 PLXNC1O60486 1568 aa-0.27□□□□□ -2.45
RNU6-39P-201ENST00000384344 MED23Q9ULK4 1368 aa-0.27□□□□□ -2.45
RNU6-39P-201ENST00000384344 TCRBV3S1A0A5B6 114 aa-0.27□□□□□ -2.45
RNU6-39P-201ENST00000384344 AKR1D1P51857 326 aa-0.27□□□□□ -2.45
RNU6-39P-201ENST00000384344 ELOF1P60002 83 aaKnown RBP-0.27□□□□□ -2.45
RNU6-39P-201ENST00000384344 TMEM128Q5BJH2 165 aa-0.27□□□□□ -2.45
RNU6-39P-201ENST00000384344 COX6B2Q6YFQ2 88 aa-0.27□□□□□ -2.45
RNU6-39P-201ENST00000384344 CENPHQ9H3R5 247 aa-0.27□□□□□ -2.45
RNU6-39P-201ENST00000384344 PRDM2Q13029 1718 aa-0.27□□□□□ -2.45
RNU6-39P-201ENST00000384344 DDX60Q8IY21 1712 aaKnown RBP-0.27□□□□□ -2.45
RNU6-39P-201ENST00000384344 CLTCQ00610 1675 aaKnown RBP-0.27□□□□□ -2.45
RNU6-39P-201ENST00000384344 CASKIN1Q8WXD9 1431 aa-0.28□□□□□ -2.45
RNU6-39P-201ENST00000384344 TCRAP04437 139 aa-0.28□□□□□ -2.45
RNU6-39P-201ENST00000384344 APODP05090 189 aa-0.28□□□□□ -2.45
RNU6-39P-201ENST00000384344 SLC25A26Q70HW3 274 aa-0.28□□□□□ -2.45
RNU6-39P-201ENST00000384344 SMIM11BQ8TCY0 68 aa-0.28□□□□□ -2.45
RNU6-39P-201ENST00000384344 SLC35B3Q9H1N7 401 aa-0.28□□□□□ -2.45
RNU6-39P-201ENST00000384344 CALML5Q9NZT1 146 aa-0.28□□□□□ -2.45
RNU6-39P-201ENST00000384344 CCDC180Q9P1Z9 1646 aa-0.28□□□□□ -2.45
RNU6-39P-201ENST00000384344 ARHGAP5Q13017 1502 aa-0.28□□□□□ -2.45
RNU6-39P-201ENST00000384344 ZNF518AQ6AHZ1 1483 aa-0.29□□□□□ -2.46
RNU6-39P-201ENST00000384344 KIAA1551Q9HCM1 1747 aa-0.29□□□□□ -2.46
RNU6-39P-201ENST00000384344 SCN7AQ01118 1682 aa-0.29□□□□□ -2.46
RNU6-39P-201ENST00000384344 CXorf51AA0A1B0GTR3 108 aa-0.29□□□□□ -2.46
RNU6-39P-201ENST00000384344 DPM2O94777 84 aa-0.29□□□□□ -2.46
RNU6-39P-201ENST00000384344 COX4I1P13073 169 aa-0.29□□□□□ -2.46
RNU6-39P-201ENST00000384344 MT1GP13640 62 aa-0.29□□□□□ -2.46
RNU6-39P-201ENST00000384344 PPP1R2P3Q6NXS1 205 aa-0.29□□□□□ -2.46
RNU6-39P-201ENST00000384344 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.29□□□□□ -2.46
RNU6-39P-201ENST00000384344 NDUFA11Q86Y39 141 aa-0.29□□□□□ -2.46
RNU6-39P-201ENST00000384344 SCAPERQ9BY12 1400 aa-0.3□□□□□ -2.46
RNU6-39P-201ENST00000384344 UNC13AQ9UPW8 1703 aa-0.3□□□□□ -2.46
RNU6-39P-201ENST00000384344 TMEM2Q9UHN6 1383 aa-0.3□□□□□ -2.46
RNU6-39P-201ENST00000384344 SMIM24O75264 130 aa-0.3□□□□□ -2.46
RNU6-39P-201ENST00000384344 NMBP08949 121 aa-0.3□□□□□ -2.46
RNU6-39P-201ENST00000384344 S100GP29377 79 aa-0.3□□□□□ -2.46
RNU6-39P-201ENST00000384344 PI4KAP42356 2102 aa-0.3□□□□□ -2.46
RNU6-39P-201ENST00000384344 TFAMQ00059 246 aaKnown RBP-0.3□□□□□ -2.46
RNU6-39P-201ENST00000384344 CYP2G1PQ6ZSU1 146 aa-0.3□□□□□ -2.46
RNU6-39P-201ENST00000384344 SKA2Q8WVK7 121 aaPredicted RBP-0.3□□□□□ -2.46
RNU6-39P-201ENST00000384344 TMEM242Q9NWH2 141 aa-0.3□□□□□ -2.46
RNU6-39P-201ENST00000384344 NDUFAF1Q9Y375 327 aa-0.3□□□□□ -2.46
RNU6-39P-201ENST00000384344 IFT172Q9UG01 1749 aa-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms