RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 FAM236AA0A1B0GUQ0 79 aa6.42□□□□□ -1.38
GPNMB-202ENST00000381990 FAM236BA0A1B0GV22 79 aa6.42□□□□□ -1.38
GPNMB-202ENST00000381990 A8MZ25 164 aa6.42□□□□□ -1.38
GPNMB-202ENST00000381990 INAFM1C9JVW0 142 aa6.42□□□□□ -1.38
GPNMB-202ENST00000381990 CXCL5P42830 114 aa6.42□□□□□ -1.38
GPNMB-202ENST00000381990 ZNF415Q09FC8 603 aa6.42□□□□□ -1.38
GPNMB-202ENST00000381990 FAM222AQ5U5X8 452 aa6.42□□□□□ -1.38
GPNMB-202ENST00000381990 IGHV3-73A0A0B4J1V6 119 aa6.42□□□□□ -1.38
GPNMB-202ENST00000381990 ODF3L2Q3SX64 289 aa6.42□□□□□ -1.38
GPNMB-202ENST00000381990 FAM19A3Q7Z5A8 133 aa6.42□□□□□ -1.38
GPNMB-202ENST00000381990 LINC01587Q99440 93 aa6.42□□□□□ -1.38
GPNMB-202ENST00000381990 LINC00467Q9BRT7 94 aa6.42□□□□□ -1.38
GPNMB-202ENST00000381990 NSD1Q96L73 2696 aaPredicted RBP6.42□□□□□ -1.38
GPNMB-202ENST00000381990 IGHV3-53P01767 116 aa6.41□□□□□ -1.38
GPNMB-202ENST00000381990 RBMY1A1P0DJD3 496 aaKnown RBP6.41□□□□□ -1.38
GPNMB-202ENST00000381990 RBMY1CP0DJD4 496 aa6.41□□□□□ -1.38
GPNMB-202ENST00000381990 INAFM2P0DMQ5 153 aa6.41□□□□□ -1.38
GPNMB-202ENST00000381990 RBMY1FQ15415 496 aaKnown RBP6.41□□□□□ -1.38
GPNMB-202ENST00000381990 DAND5Q8N907 189 aa6.41□□□□□ -1.38
GPNMB-202ENST00000381990 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.41□□□□□ -1.38
GPNMB-202ENST00000381990 IGKV2-29A2NJV5 120 aaPredicted RBP6.41□□□□□ -1.38
GPNMB-202ENST00000381990 UQCRQO14949 82 aa6.4□□□□□ -1.38
GPNMB-202ENST00000381990 PF4P02776 101 aa6.4□□□□□ -1.38
GPNMB-202ENST00000381990 DGAT2L7PQ6IED9 249 aa6.4□□□□□ -1.38
GPNMB-202ENST00000381990 Q9H8V8 135 aa6.4□□□□□ -1.38
GPNMB-202ENST00000381990 CMC4P56277 68 aaPredicted RBP6.4□□□□□ -1.38
GPNMB-202ENST00000381990 BEAN1Q3B7T3 259 aa6.4□□□□□ -1.38
GPNMB-202ENST00000381990 C3orf22Q8N5N4 141 aa6.4□□□□□ -1.38
GPNMB-202ENST00000381990 IGLV1-51P01701 117 aa6.4□□□□□ -1.39
GPNMB-202ENST00000381990 DAZ2Q13117 558 aaKnown RBP6.4□□□□□ -1.39
GPNMB-202ENST00000381990 DAZ4Q86SG3 579 aaKnown RBP6.4□□□□□ -1.39
GPNMB-202ENST00000381990 DAZ3Q9NR90 486 aaKnown RBP6.4□□□□□ -1.39
GPNMB-202ENST00000381990 CSDC2Q9Y534 153 aaKnown RBP6.4□□□□□ -1.39
GPNMB-202ENST00000381990 HIVEP1P15822 2718 aa6.39□□□□□ -1.39
GPNMB-202ENST00000381990 C2CD3Q4AC94 2353 aa6.39□□□□□ -1.39
GPNMB-202ENST00000381990 INSP01308 110 aa6.39□□□□□ -1.39
GPNMB-202ENST00000381990 HTN1P15515 57 aa6.39□□□□□ -1.39
GPNMB-202ENST00000381990 KRTAP10-3P60369 221 aa6.39□□□□□ -1.39
GPNMB-202ENST00000381990 STHQ8IWL8 128 aa6.39□□□□□ -1.39
GPNMB-202ENST00000381990 OVOL2Q9BRP0 275 aa6.39□□□□□ -1.39
GPNMB-202ENST00000381990 FN1P02751 2386 aaKnown RBP6.39□□□□□ -1.39
GPNMB-202ENST00000381990 CUBNO60494 3623 aa6.38□□□□□ -1.39
GPNMB-202ENST00000381990 IGHV3OR16-12A0A075B7B8 117 aa6.38□□□□□ -1.39
GPNMB-202ENST00000381990 BAALC-AS2P0C853 105 aa6.38□□□□□ -1.39
GPNMB-202ENST00000381990 LINC00242Q5T6M2 205 aa6.38□□□□□ -1.39
GPNMB-202ENST00000381990 Q6ZSN1 163 aa6.38□□□□□ -1.39
GPNMB-202ENST00000381990 C5orf38Q86SI9 138 aa6.38□□□□□ -1.39
GPNMB-202ENST00000381990 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.38□□□□□ -1.39
GPNMB-202ENST00000381990 SMCR5Q8TEV8 140 aa6.38□□□□□ -1.39
GPNMB-202ENST00000381990 LINC00526Q96FQ7 95 aa6.38□□□□□ -1.39
GPNMB-202ENST00000381990 SMIM1B2RUZ4 78 aa6.38□□□□□ -1.39
GPNMB-202ENST00000381990 C9orf153Q5TBE3 101 aa6.38□□□□□ -1.39
GPNMB-202ENST00000381990 ZNF625Q96I27 306 aaPredicted RBP6.38□□□□□ -1.39
GPNMB-202ENST00000381990 TRAV13-2A0A0B4J235 113 aa6.37□□□□□ -1.39
GPNMB-202ENST00000381990 PRIMA1Q86XR5 153 aa6.37□□□□□ -1.39
GPNMB-202ENST00000381990 NACAE9PAV3 2078 aa6.37□□□□□ -1.39
GPNMB-202ENST00000381990 RS1O15537 224 aa6.37□□□□□ -1.39
GPNMB-202ENST00000381990 C11orf72Q8NBR9 251 aa6.37□□□□□ -1.39
GPNMB-202ENST00000381990 XCL2Q9UBD3 114 aa6.37□□□□□ -1.39
GPNMB-202ENST00000381990 Q9UF83 564 aa6.37□□□□□ -1.39
GPNMB-202ENST00000381990 COX6A2Q02221 97 aa6.36□□□□□ -1.39
GPNMB-202ENST00000381990 SOSTDC1Q6X4U4 206 aa6.36□□□□□ -1.39
GPNMB-202ENST00000381990 IGHV3-38A0A0C4DH36 116 aa6.36□□□□□ -1.39
GPNMB-202ENST00000381990 RPL28P46779 137 aaKnown RBP6.36□□□□□ -1.39
GPNMB-202ENST00000381990 LINC00482Q8N8I6 264 aa6.36□□□□□ -1.39
GPNMB-202ENST00000381990 JMJD1CQ15652 2540 aa6.35□□□□□ -1.39
GPNMB-202ENST00000381990 TRBV10-1A0A0K0K1A3 114 aa6.35□□□□□ -1.39
GPNMB-202ENST00000381990 ATOX1O00244 68 aa6.35□□□□□ -1.39
GPNMB-202ENST00000381990 PRM2P04554 102 aa6.35□□□□□ -1.39
GPNMB-202ENST00000381990 COX7CP15954 63 aa6.35□□□□□ -1.39
GPNMB-202ENST00000381990 MALP21145 153 aa6.35□□□□□ -1.39
GPNMB-202ENST00000381990 HIST1H4AP62805 103 aaKnown RBP6.35□□□□□ -1.39
GPNMB-202ENST00000381990 C19orf73Q9NVV2 129 aa6.35□□□□□ -1.39
GPNMB-202ENST00000381990 NIPBLQ6KC79 2804 aaeCLIP6.35□□□□□ -1.39
GPNMB-202ENST00000381990 A0A1B0GX51 115 aa6.35□□□□□ -1.39
GPNMB-202ENST00000381990 C1orf158Q8N1D5 194 aa6.35□□□□□ -1.39
GPNMB-202ENST00000381990 C22orf24Q9Y442 160 aa6.35□□□□□ -1.39
GPNMB-202ENST00000381990 CRPP02741 224 aa6.34□□□□□ -1.39
GPNMB-202ENST00000381990 CRYGAP11844 174 aa6.34□□□□□ -1.39
GPNMB-202ENST00000381990 F5H768 121 aa6.34□□□□□ -1.4
GPNMB-202ENST00000381990 A0A0U1RRA0 63 aa6.33□□□□□ -1.4
GPNMB-202ENST00000381990 DNAL4O96015 105 aa6.33□□□□□ -1.4
GPNMB-202ENST00000381990 RPL36AP83881 106 aaKnown RBP6.33□□□□□ -1.4
GPNMB-202ENST00000381990 GAGE2AQ6NT46 116 aa6.33□□□□□ -1.4
GPNMB-202ENST00000381990 RPL36ALQ969Q0 106 aaKnown RBP6.33□□□□□ -1.4
GPNMB-202ENST00000381990 FAM218AQ96MZ4 157 aa6.33□□□□□ -1.4
GPNMB-202ENST00000381990 FLNBO75369 2602 aaKnown RBP6.33□□□□□ -1.4
GPNMB-202ENST00000381990 WFDC10AQ9H1F0 79 aa6.33□□□□□ -1.4
GPNMB-202ENST00000381990 CDC42SE2Q9NRR3 84 aa6.33□□□□□ -1.4
GPNMB-202ENST00000381990 TRAV13-1A0A0B4J241 112 aa6.32□□□□□ -1.4
GPNMB-202ENST00000381990 H0YGX0 51 aa6.32□□□□□ -1.4
GPNMB-202ENST00000381990 J3KT08 172 aa6.32□□□□□ -1.4
GPNMB-202ENST00000381990 GIG44P09565 113 aaPredicted RBP6.32□□□□□ -1.4
GPNMB-202ENST00000381990 LINC00694P0DN24 101 aa6.32□□□□□ -1.4
GPNMB-202ENST00000381990 NOTCH3Q9UM47 2321 aa6.32□□□□□ -1.4
GPNMB-202ENST00000381990 F8P00451 2351 aa6.31□□□□□ -1.4
GPNMB-202ENST00000381990 RPS28P62857 69 aaKnown RBP6.31□□□□□ -1.4
GPNMB-202ENST00000381990 C3orf56Q8N813 242 aa6.31□□□□□ -1.4
GPNMB-202ENST00000381990 IL17DQ8TAD2 202 aa6.31□□□□□ -1.4
GPNMB-202ENST00000381990 K7EQD1 137 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms