RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 IL17DQ8TAD2 202 aa10.23□□□□□ -0.77
CLCN4-201ENST00000380829 SPANXA1Q9NS26 97 aa10.23□□□□□ -0.77
CLCN4-201ENST00000380829 KLK5Q9Y337 293 aaPredicted RBP10.23□□□□□ -0.77
CLCN4-201ENST00000380829 Q6ZTI0 123 aa10.23□□□□□ -0.77
CLCN4-201ENST00000380829 C20orf203Q8NBC4 194 aa10.23□□□□□ -0.77
CLCN4-201ENST00000380829 TMEM141Q96I45 108 aa10.23□□□□□ -0.77
CLCN4-201ENST00000380829 NPC2P61916 151 aa10.22□□□□□ -0.77
CLCN4-201ENST00000380829 IGHV3-53P01767 116 aa10.22□□□□□ -0.77
CLCN4-201ENST00000380829 IGHV3-38A0A0C4DH36 116 aa10.21□□□□□ -0.77
CLCN4-201ENST00000380829 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.21□□□□□ -0.77
CLCN4-201ENST00000380829 NOP10Q9NPE3 64 aaKnown RBP10.21□□□□□ -0.77
CLCN4-201ENST00000380829 TRBV30A0A0K0K1B3 111 aa10.21□□□□□ -0.78
CLCN4-201ENST00000380829 TRBV7-7A0A0K0K1E9 115 aa10.21□□□□□ -0.78
CLCN4-201ENST00000380829 C9orf153Q5TBE3 101 aa10.21□□□□□ -0.78
CLCN4-201ENST00000380829 ICOSQ9Y6W8 199 aa10.21□□□□□ -0.78
CLCN4-201ENST00000380829 CSNK1G2-AS1Q8NCQ2 148 aa10.2□□□□□ -0.78
CLCN4-201ENST00000380829 ATRQ13535 2644 aa10.2□□□□□ -0.78
CLCN4-201ENST00000380829 TMEM223A0PJW6 202 aa10.19□□□□□ -0.78
CLCN4-201ENST00000380829 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.19□□□□□ -0.78
CLCN4-201ENST00000380829 LEPROTO15243 131 aa10.19□□□□□ -0.78
CLCN4-201ENST00000380829 LINC01600Q96MT4 127 aa10.19□□□□□ -0.78
CLCN4-201ENST00000380829 PLAC8L1A1L4L8 177 aa10.18□□□□□ -0.78
CLCN4-201ENST00000380829 TMEM101Q96IK0 257 aa10.18□□□□□ -0.78
CLCN4-201ENST00000380829 A0A0J9YXY3 114 aa10.18□□□□□ -0.78
CLCN4-201ENST00000380829 PRSS2P07478 247 aa10.18□□□□□ -0.78
CLCN4-201ENST00000380829 C16orf74Q96GX8 76 aa10.18□□□□□ -0.78
CLCN4-201ENST00000380829 DNAJC30Q96LL9 226 aa10.17□□□□□ -0.78
CLCN4-201ENST00000380829 IGLV4-3A0A075B6K6 122 aa10.17□□□□□ -0.78
CLCN4-201ENST00000380829 SMCR5Q8TEV8 140 aa10.17□□□□□ -0.78
CLCN4-201ENST00000380829 FAM240AA0A1B0GVK7 77 aa10.16□□□□□ -0.78
CLCN4-201ENST00000380829 H3BT86 120 aa10.16□□□□□ -0.78
CLCN4-201ENST00000380829 HERVK_113P63121 156 aa10.16□□□□□ -0.78
CLCN4-201ENST00000380829 CHCHD7Q9BUK0 85 aa10.16□□□□□ -0.78
CLCN4-201ENST00000380829 TRRAPQ9Y4A5 3859 aa10.16□□□□□ -0.78
CLCN4-201ENST00000380829 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.16□□□□□ -0.78
CLCN4-201ENST00000380829 TRAV8-3A0A0A6YYJ7 113 aa10.16□□□□□ -0.78
CLCN4-201ENST00000380829 IGKV2-29A2NJV5 120 aaPredicted RBP10.16□□□□□ -0.78
CLCN4-201ENST00000380829 DAZ2Q13117 558 aaKnown RBP10.16□□□□□ -0.78
CLCN4-201ENST00000380829 A0A0J9YXV3 536 aa10.15□□□□□ -0.78
CLCN4-201ENST00000380829 RNASE13Q5GAN3 156 aaKnown RBP10.15□□□□□ -0.78
CLCN4-201ENST00000380829 ADAMTSL4-AS1Q5T5F5 129 aa10.15□□□□□ -0.78
CLCN4-201ENST00000380829 C9orf66Q5T8R8 295 aa10.15□□□□□ -0.79
CLCN4-201ENST00000380829 C3orf22Q8N5N4 141 aa10.15□□□□□ -0.79
CLCN4-201ENST00000380829 FAM104AQ969W3 186 aa10.15□□□□□ -0.79
CLCN4-201ENST00000380829 LITAFQ99732 161 aa10.15□□□□□ -0.79
CLCN4-201ENST00000380829 TRGV2A0A075B6R0 118 aa10.14□□□□□ -0.79
CLCN4-201ENST00000380829 K7EQD1 137 aa10.14□□□□□ -0.79
CLCN4-201ENST00000380829 FAM19A5Q7Z5A7 132 aaPredicted RBP10.14□□□□□ -0.79
CLCN4-201ENST00000380829 LST1O00453 97 aa10.13□□□□□ -0.79
CLCN4-201ENST00000380829 SMIM9A6NGZ8 99 aa10.13□□□□□ -0.79
CLCN4-201ENST00000380829 DEFB121Q5J5C9 76 aa10.13□□□□□ -0.79
CLCN4-201ENST00000380829 PYGO1Q9Y3Y4 419 aa10.13□□□□□ -0.79
CLCN4-201ENST00000380829 A8MZ25 164 aa10.12□□□□□ -0.79
CLCN4-201ENST00000380829 IGHV3-30-3P0DP02 117 aa10.12□□□□□ -0.79
CLCN4-201ENST00000380829 UBE2D4Q9Y2X8 147 aa10.12□□□□□ -0.79
CLCN4-201ENST00000380829 COX6CP09669 75 aa10.12□□□□□ -0.79
CLCN4-201ENST00000380829 RPL36AP83881 106 aaKnown RBP10.11□□□□□ -0.79
CLCN4-201ENST00000380829 RPL36ALQ969Q0 106 aaKnown RBP10.11□□□□□ -0.79
CLCN4-201ENST00000380829 OVOL2Q9BRP0 275 aa10.11□□□□□ -0.79
CLCN4-201ENST00000380829 DAND5Q8N907 189 aa10.11□□□□□ -0.79
CLCN4-201ENST00000380829 NBEAL2Q6ZNJ1 2754 aa10.1□□□□□ -0.79
CLCN4-201ENST00000380829 TRBV10-1A0A0K0K1A3 114 aa10.1□□□□□ -0.79
CLCN4-201ENST00000380829 UQCRQO14949 82 aa10.1□□□□□ -0.79
CLCN4-201ENST00000380829 LOC100131303A0A0U1RQF7 123 aa10.09□□□□□ -0.79
CLCN4-201ENST00000380829 J3KT08 172 aa10.09□□□□□ -0.79
CLCN4-201ENST00000380829 TIMM21Q9BVV7 248 aa10.09□□□□□ -0.79
CLCN4-201ENST00000380829 CYSTM1Q9H1C7 97 aa10.09□□□□□ -0.79
CLCN4-201ENST00000380829 LINC00526Q96FQ7 95 aa10.08□□□□□ -0.8
CLCN4-201ENST00000380829 TRGV4A0A0C4DH28 118 aa10.08□□□□□ -0.8
CLCN4-201ENST00000380829 DEFB130BP0DP73 79 aa10.08□□□□□ -0.8
CLCN4-201ENST00000380829 DEFB130AP0DP74 79 aa10.08□□□□□ -0.8
CLCN4-201ENST00000380829 NTM-AS1Q6ZSK4 140 aa10.07□□□□□ -0.8
CLCN4-201ENST00000380829 IMUPQ9GZP8 106 aa10.07□□□□□ -0.8
CLCN4-201ENST00000380829 X6R8D5 127 aa10.07□□□□□ -0.8
CLCN4-201ENST00000380829 MIAQ16674 131 aa10.06□□□□□ -0.8
CLCN4-201ENST00000380829 DAZ4Q86SG3 579 aaKnown RBP10.06□□□□□ -0.8
CLCN4-201ENST00000380829 DAZ3Q9NR90 486 aaKnown RBP10.06□□□□□ -0.8
CLCN4-201ENST00000380829 NDUFA12Q9UI09 145 aa10.06□□□□□ -0.8
CLCN4-201ENST00000380829 MRPS36P82909 103 aaKnown RBP10.06□□□□□ -0.8
CLCN4-201ENST00000380829 FHL2Q14192 279 aa10.05□□□□□ -0.8
CLCN4-201ENST00000380829 DEFB135Q30KP9 77 aa10.05□□□□□ -0.8
CLCN4-201ENST00000380829 DGAT2L7PQ6IED9 249 aa10.05□□□□□ -0.8
CLCN4-201ENST00000380829 SPANXDQ9BXN6 97 aa10.05□□□□□ -0.8
CLCN4-201ENST00000380829 SPANXCQ9NY87 97 aa10.05□□□□□ -0.8
CLCN4-201ENST00000380829 TRBV6-4A0A1B0GX49 114 aa10.05□□□□□ -0.8
CLCN4-201ENST00000380829 hADV29S1A0JD25 119 aa10.05□□□□□ -0.8
CLCN4-201ENST00000380829 LINC00643Q86TS7 51 aa10.04□□□□□ -0.8
CLCN4-201ENST00000380829 COX7CP15954 63 aa10.04□□□□□ -0.8
CLCN4-201ENST00000380829 GAGE2AQ6NT46 116 aa10.04□□□□□ -0.8
CLCN4-201ENST00000380829 KIR2DL5BQ8NHK3 375 aa10.04□□□□□ -0.8
CLCN4-201ENST00000380829 DEFB4AO15263 64 aa10.03□□□□□ -0.8
CLCN4-201ENST00000380829 C2orf48Q96LS8 159 aa10.03□□□□□ -0.8
CLCN4-201ENST00000380829 STAB1Q9NY15 2570 aa10.03□□□□□ -0.8
CLCN4-201ENST00000380829 ACYP1P07311 99 aa10.03□□□□□ -0.8
CLCN4-201ENST00000380829 WFDC9Q8NEX5 89 aa10.03□□□□□ -0.8
CLCN4-201ENST00000380829 FBN1P35555 2871 aaKnown RBP10.02□□□□□ -0.8
CLCN4-201ENST00000380829 A0A1B0GX51 115 aa10.02□□□□□ -0.81
CLCN4-201ENST00000380829 TINCRA0A1B0GVN0 87 aa10.02□□□□□ -0.81
CLCN4-201ENST00000380829 IGHV1-58A0A0C4DH39 117 aa10.01□□□□□ -0.81
CLCN4-201ENST00000380829 KRTAP24-1Q3LI83 254 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms