RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 GAGE12HA6NDE8 117 aa8.38□□□□□ -1.07
SMN1-202ENST00000380707 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.38□□□□□ -1.07
SMN1-202ENST00000380707 BAALCQ8WXS3 180 aa8.38□□□□□ -1.07
SMN1-202ENST00000380707 A0A087WTM6 91 aa8.37□□□□□ -1.07
SMN1-202ENST00000380707 LECT2O14960 151 aa8.37□□□□□ -1.07
SMN1-202ENST00000380707 FOXI1Q12951 378 aa8.37□□□□□ -1.07
SMN1-202ENST00000380707 WFDC2Q14508 124 aa8.37□□□□□ -1.07
SMN1-202ENST00000380707 PAPPA-AS1Q5QFB9 102 aa8.37□□□□□ -1.07
SMN1-202ENST00000380707 UBE2D1P51668 147 aa8.36□□□□□ -1.07
SMN1-202ENST00000380707 NDUFA6P56556 154 aa8.36□□□□□ -1.07
SMN1-202ENST00000380707 CD164L2Q6UWJ8 174 aa8.36□□□□□ -1.07
SMN1-202ENST00000380707 C2orf88Q9BSF0 95 aa8.36□□□□□ -1.07
SMN1-202ENST00000380707 COA6Q5JTJ3 125 aaKnown RBP8.35□□□□□ -1.07
SMN1-202ENST00000380707 CST9LQ9H4G1 147 aa8.35□□□□□ -1.07
SMN1-202ENST00000380707 ATP5LO75964 103 aa8.34□□□□□ -1.07
SMN1-202ENST00000380707 PMVKQ15126 192 aa8.34□□□□□ -1.07
SMN1-202ENST00000380707 LINC00242Q5T6M2 205 aa8.34□□□□□ -1.07
SMN1-202ENST00000380707 KRTAP9-9Q9BYP9 154 aa8.34□□□□□ -1.07
SMN1-202ENST00000380707 KRTAP9-4Q9BYQ2 154 aa8.34□□□□□ -1.07
SMN1-202ENST00000380707 A0A1B0GVY2 172 aa8.34□□□□□ -1.08
SMN1-202ENST00000380707 USP17L23D6RBM5 183 aa8.34□□□□□ -1.08
SMN1-202ENST00000380707 LEPROTL1O95214 131 aa8.34□□□□□ -1.08
SMN1-202ENST00000380707 COX6A2Q02221 97 aa8.34□□□□□ -1.08
SMN1-202ENST00000380707 IGHV3OR16-9A0A0B4J2B5 98 aa8.33□□□□□ -1.08
SMN1-202ENST00000380707 FABP4P15090 132 aa8.33□□□□□ -1.08
SMN1-202ENST00000380707 FAM19A3Q7Z5A8 133 aa8.33□□□□□ -1.08
SMN1-202ENST00000380707 IFI27L1Q96BM0 104 aa8.33□□□□□ -1.08
SMN1-202ENST00000380707 A0A0J9YXV3 536 aa8.32□□□□□ -1.08
SMN1-202ENST00000380707 PRSS1P07477 247 aa8.32□□□□□ -1.08
SMN1-202ENST00000380707 C5orf38Q86SI9 138 aa8.32□□□□□ -1.08
SMN1-202ENST00000380707 Q8N814 137 aa8.32□□□□□ -1.08
SMN1-202ENST00000380707 DYNC1H1Q14204 4646 aaKnown RBP8.32□□□□□ -1.08
SMN1-202ENST00000380707 COX7A2LO14548 114 aa8.31□□□□□ -1.08
SMN1-202ENST00000380707 EREGO14944 169 aa8.31□□□□□ -1.08
SMN1-202ENST00000380707 FUSP35637 526 aaKnown RBP eCLIP8.31□□□□□ -1.08
SMN1-202ENST00000380707 KRTAP10-2P60368 255 aa8.31□□□□□ -1.08
SMN1-202ENST00000380707 C15orf56Q8N910 161 aa8.31□□□□□ -1.08
SMN1-202ENST00000380707 LRP1BQ9NZR2 4599 aa8.31□□□□□ -1.08
SMN1-202ENST00000380707 HSPB8Q9UJY1 196 aa8.3□□□□□ -1.08
SMN1-202ENST00000380707 TINCRA0A1B0GVN0 87 aa8.29□□□□□ -1.08
SMN1-202ENST00000380707 MALP21145 153 aa8.29□□□□□ -1.08
SMN1-202ENST00000380707 SPATA12Q7Z6I5 190 aa8.29□□□□□ -1.08
SMN1-202ENST00000380707 IGLV4-69A0A075B6H9 119 aa8.29□□□□□ -1.08
SMN1-202ENST00000380707 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.29□□□□□ -1.08
SMN1-202ENST00000380707 A0A087WZ39 114 aa8.29□□□□□ -1.08
SMN1-202ENST00000380707 TRAV12-1A0A0B4J245 112 aa8.29□□□□□ -1.08
SMN1-202ENST00000380707 H0Y8G0 127 aa8.29□□□□□ -1.08
SMN1-202ENST00000380707 HERVK_113P63121 156 aa8.29□□□□□ -1.08
SMN1-202ENST00000380707 SEC11AP67812 179 aa8.29□□□□□ -1.08
SMN1-202ENST00000380707 CFAP161Q6P656 301 aa8.29□□□□□ -1.08
SMN1-202ENST00000380707 GEMIN7Q9H840 131 aaKnown RBP8.29□□□□□ -1.08
SMN1-202ENST00000380707 CDKN2A-AS1Q9UH64 79 aa8.29□□□□□ -1.08
SMN1-202ENST00000380707 IGHV1-58A0A0C4DH39 117 aa8.28□□□□□ -1.08
SMN1-202ENST00000380707 hDV102S1A0JD36 115 aa8.28□□□□□ -1.08
SMN1-202ENST00000380707 IGLC3P0DOY3 106 aa8.28□□□□□ -1.08
SMN1-202ENST00000380707 HIGD2BQ4VC39 106 aa8.28□□□□□ -1.08
SMN1-202ENST00000380707 C14orf177Q52M58 125 aa8.28□□□□□ -1.08
SMN1-202ENST00000380707 S100A6P06703 90 aa8.27□□□□□ -1.09
SMN1-202ENST00000380707 LINC00469Q8N7U9 141 aa8.27□□□□□ -1.09
SMN1-202ENST00000380707 CHTOPQ9Y3Y2 248 aaKnown RBP8.27□□□□□ -1.09
SMN1-202ENST00000380707 IGLV5-45A0A087WSX0 123 aa8.26□□□□□ -1.09
SMN1-202ENST00000380707 GVQW2A0A096LPI5 108 aaPredicted RBP8.26□□□□□ -1.09
SMN1-202ENST00000380707 HIST3H2BBQ8N257 126 aa8.26□□□□□ -1.09
SMN1-202ENST00000380707 NTN5Q8WTR8 489 aaPredicted RBP8.26□□□□□ -1.09
SMN1-202ENST00000380707 LINC00526Q96FQ7 95 aa8.26□□□□□ -1.09
SMN1-202ENST00000380707 PACRGQ96M98 296 aaPredicted RBP8.26□□□□□ -1.09
SMN1-202ENST00000380707 CHAC1Q9BUX1 264 aa8.26□□□□□ -1.09
SMN1-202ENST00000380707 MAP1LC3CQ9BXW4 147 aa8.26□□□□□ -1.09
SMN1-202ENST00000380707 MRPL35Q9NZE8 188 aaKnown RBP8.26□□□□□ -1.09
SMN1-202ENST00000380707 DNAH8Q96JB1 4490 aa8.26□□□□□ -1.09
SMN1-202ENST00000380707 IGHV3-64A0A075B6Q5 118 aa8.25□□□□□ -1.09
SMN1-202ENST00000380707 C11orf86A6NJI1 115 aa8.25□□□□□ -1.09
SMN1-202ENST00000380707 SLPIP03973 132 aa8.25□□□□□ -1.09
SMN1-202ENST00000380707 SNRPEP62304 92 aaKnown RBP8.25□□□□□ -1.09
SMN1-202ENST00000380707 ODF1Q14990 250 aa8.25□□□□□ -1.09
SMN1-202ENST00000380707 F8VRH5 84 aa8.24□□□□□ -1.09
SMN1-202ENST00000380707 APOMO95445 188 aa8.24□□□□□ -1.09
SMN1-202ENST00000380707 ORAOV1Q8WV07 137 aa8.24□□□□□ -1.09
SMN1-202ENST00000380707 IGLV5-52A0A0A0MRZ9 124 aa8.24□□□□□ -1.09
SMN1-202ENST00000380707 ZNF561-AS1K7EIQ3 104 aa8.24□□□□□ -1.09
SMN1-202ENST00000380707 ZNF22P17026 224 aaPredicted RBP8.24□□□□□ -1.09
SMN1-202ENST00000380707 LINC01561Q8N1V8 128 aa8.24□□□□□ -1.09
SMN1-202ENST00000380707 OR10D4PQ8NGN7 298 aa8.24□□□□□ -1.09
SMN1-202ENST00000380707 C5orf52A6NGY3 159 aa8.23□□□□□ -1.09
SMN1-202ENST00000380707 SMIM1B2RUZ4 78 aa8.23□□□□□ -1.09
SMN1-202ENST00000380707 SYS1-DBNDD2H3BUS1 97 aa8.23□□□□□ -1.09
SMN1-202ENST00000380707 CNBPP62633 177 aaKnown RBP8.23□□□□□ -1.09
SMN1-202ENST00000380707 CDPF1Q6NVV7 123 aa8.23□□□□□ -1.09
SMN1-202ENST00000380707 HIST1H2BLQ99880 126 aa8.23□□□□□ -1.09
SMN1-202ENST00000380707 PMCHL2Q9BQD1 86 aa8.23□□□□□ -1.09
SMN1-202ENST00000380707 KRTAP4-7Q9BYR0 210 aa8.23□□□□□ -1.09
SMN1-202ENST00000380707 SPINK8P0C7L1 97 aa8.22□□□□□ -1.09
SMN1-202ENST00000380707 C3orf79P0CE67 100 aa8.22□□□□□ -1.09
SMN1-202ENST00000380707 S100A2P29034 98 aa8.22□□□□□ -1.09
SMN1-202ENST00000380707 SPAG11BQ08648 103 aa8.22□□□□□ -1.09
SMN1-202ENST00000380707 KIAA0087Q14695 138 aa8.22□□□□□ -1.09
SMN1-202ENST00000380707 LINC01620Q4KN68 170 aa8.22□□□□□ -1.09
SMN1-202ENST00000380707 BIRC6Q9NR09 4857 aa8.22□□□□□ -1.09
SMN1-202ENST00000380707 APOBP04114 4563 aaKnown RBP8.21□□□□□ -1.09
SMN1-202ENST00000380707 C16orf90A8MZG2 172 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms