RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 CDSNQ15517 529 aa10.36□□□□□ -0.75
TRIM13-202ENST00000378182 CPAMD8Q8IZJ3 1885 aa10.36□□□□□ -0.75
TRIM13-202ENST00000378182 Q6ZSR3 168 aa10.35□□□□□ -0.75
TRIM13-202ENST00000378182 C9orf116Q5BN46 136 aaPredicted RBP10.35□□□□□ -0.75
TRIM13-202ENST00000378182 Q6ZQY7 126 aa10.35□□□□□ -0.75
TRIM13-202ENST00000378182 PTPRSQ13332 1948 aa10.35□□□□□ -0.75
TRIM13-202ENST00000378182 CSPG4Q6UVK1 2322 aa10.35□□□□□ -0.75
TRIM13-202ENST00000378182 ZNF22P17026 224 aaPredicted RBP10.34□□□□□ -0.75
TRIM13-202ENST00000378182 REG3GQ6UW15 175 aa10.34□□□□□ -0.75
TRIM13-202ENST00000378182 Q6ZTC4 211 aa10.33□□□□□ -0.76
TRIM13-202ENST00000378182 TRIAP1O43715 76 aa10.33□□□□□ -0.76
TRIM13-202ENST00000378182 LINC00643Q86TS7 51 aa10.33□□□□□ -0.76
TRIM13-202ENST00000378182 LINC00337Q8N6G1 96 aa10.33□□□□□ -0.76
TRIM13-202ENST00000378182 SMIM11BQ8TCY0 68 aa10.33□□□□□ -0.76
TRIM13-202ENST00000378182 CRIP1P50238 77 aa10.32□□□□□ -0.76
TRIM13-202ENST00000378182 XGP55808 180 aa10.32□□□□□ -0.76
TRIM13-202ENST00000378182 NDUFA7O95182 113 aa10.32□□□□□ -0.76
TRIM13-202ENST00000378182 LRP4O75096 1905 aa10.31□□□□□ -0.76
TRIM13-202ENST00000378182 CYSRT1A8MQ03 144 aa10.31□□□□□ -0.76
TRIM13-202ENST00000378182 DEFB116Q30KQ4 102 aa10.31□□□□□ -0.76
TRIM13-202ENST00000378182 G3V4G9 280 aa10.31□□□□□ -0.76
TRIM13-202ENST00000378182 CELA1Q9UNI1 258 aa10.31□□□□□ -0.76
TRIM13-202ENST00000378182 MRGPRG-AS1Q2M3A8 158 aa10.3□□□□□ -0.76
TRIM13-202ENST00000378182 TP73-AS1Q9UF72 201 aa10.3□□□□□ -0.76
TRIM13-202ENST00000378182 SONP18583 2426 aaKnown RBP10.29□□□□□ -0.76
TRIM13-202ENST00000378182 TSHBP01222 138 aa10.29□□□□□ -0.76
TRIM13-202ENST00000378182 COA6Q5JTJ3 125 aaKnown RBP10.29□□□□□ -0.76
TRIM13-202ENST00000378182 MAPKAPK5-AS1Q8N8E1 139 aa10.29□□□□□ -0.76
TRIM13-202ENST00000378182 PLA2G1BP04054 148 aaKnown RBP10.28□□□□□ -0.76
TRIM13-202ENST00000378182 PRR3P79522 188 aaKnown RBP10.28□□□□□ -0.76
TRIM13-202ENST00000378182 PRR9Q5T870 116 aa10.28□□□□□ -0.76
TRIM13-202ENST00000378182 NDUFC2-KCTD14E9PQ53 114 aa10.28□□□□□ -0.76
TRIM13-202ENST00000378182 AVPP01185 164 aa10.28□□□□□ -0.76
TRIM13-202ENST00000378182 CRIP2P52943 208 aaPredicted RBP10.28□□□□□ -0.76
TRIM13-202ENST00000378182 ZNF73O43830 326 aaPredicted RBP10.27□□□□□ -0.77
TRIM13-202ENST00000378182 SBSPONQ8IVN8 264 aa10.27□□□□□ -0.77
TRIM13-202ENST00000378182 UNQ6190/PRO20217Q6UXQ8 127 aa10.26□□□□□ -0.77
TRIM13-202ENST00000378182 TRBV27A0A0K0K1C4 114 aa10.26□□□□□ -0.77
TRIM13-202ENST00000378182 MBD6Q96DN6 1003 aa10.26□□□□□ -0.77
TRIM13-202ENST00000378182 RNF185Q96GF1 192 aa10.26□□□□□ -0.77
TRIM13-202ENST00000378182 LST1O00453 97 aa10.25□□□□□ -0.77
TRIM13-202ENST00000378182 HIVEP3Q5T1R4 2406 aa10.25□□□□□ -0.77
TRIM13-202ENST00000378182 MT-ATP8P03928 68 aa10.25□□□□□ -0.77
TRIM13-202ENST00000378182 RNASE3P12724 160 aaKnown RBP10.25□□□□□ -0.77
TRIM13-202ENST00000378182 A0A1B0GXF2 115 aa10.25□□□□□ -0.77
TRIM13-202ENST00000378182 COX6A2Q02221 97 aa10.25□□□□□ -0.77
TRIM13-202ENST00000378182 PCOTHQ58A44 107 aa10.24□□□□□ -0.77
TRIM13-202ENST00000378182 PYGO1Q9Y3Y4 419 aa10.23□□□□□ -0.77
TRIM13-202ENST00000378182 FAM240AA0A1B0GVK7 77 aa10.23□□□□□ -0.77
TRIM13-202ENST00000378182 MRPL55Q7Z7F7 128 aaKnown RBP10.23□□□□□ -0.77
TRIM13-202ENST00000378182 C2orf48Q96LS8 159 aa10.23□□□□□ -0.77
TRIM13-202ENST00000378182 FAM19A3Q7Z5A8 133 aa10.23□□□□□ -0.77
TRIM13-202ENST00000378182 Q9BRP9 147 aa10.22□□□□□ -0.77
TRIM13-202ENST00000378182 COX17Q14061 63 aa10.22□□□□□ -0.77
TRIM13-202ENST00000378182 BRWD1-AS2P59051 145 aa10.22□□□□□ -0.77
TRIM13-202ENST00000378182 TRBV7-6A0A0J9YX20 115 aa10.22□□□□□ -0.77
TRIM13-202ENST00000378182 RNASE8Q8TDE3 154 aaKnown RBP10.2□□□□□ -0.78
TRIM13-202ENST00000378182 MRPS12O15235 138 aaKnown RBP10.2□□□□□ -0.78
TRIM13-202ENST00000378182 EBI3Q14213 229 aa10.2□□□□□ -0.78
TRIM13-202ENST00000378182 LINC00574Q9H8X3 128 aa10.19□□□□□ -0.78
TRIM13-202ENST00000378182 ABCA2Q9BZC7 2435 aa10.19□□□□□ -0.78
TRIM13-202ENST00000378182 IGLV1-40P01703 118 aa10.19□□□□□ -0.78
TRIM13-202ENST00000378182 TRBV10-3A0A0K0K1G6 114 aa10.18□□□□□ -0.78
TRIM13-202ENST00000378182 LINC01547P58512 204 aaPredicted RBP10.18□□□□□ -0.78
TRIM13-202ENST00000378182 CDC42SE2Q9NRR3 84 aa10.18□□□□□ -0.78
TRIM13-202ENST00000378182 Q6ZPA2 131 aa10.17□□□□□ -0.78
TRIM13-202ENST00000378182 SPACA4Q8TDM5 124 aa10.17□□□□□ -0.78
TRIM13-202ENST00000378182 LINC00208Q96KT6 92 aa10.17□□□□□ -0.78
TRIM13-202ENST00000378182 NAV3Q8IVL0 2385 aa10.17□□□□□ -0.78
TRIM13-202ENST00000378182 Q8IZM0 81 aa10.17□□□□□ -0.78
TRIM13-202ENST00000378182 NRACQ8N912 160 aa10.17□□□□□ -0.78
TRIM13-202ENST00000378182 IGLV4-60A0A075B6I1 120 aa10.16□□□□□ -0.78
TRIM13-202ENST00000378182 PRLHP81277 87 aa10.16□□□□□ -0.78
TRIM13-202ENST00000378182 GAS8-AS1O95177 125 aa10.16□□□□□ -0.78
TRIM13-202ENST00000378182 TRBV30A0A0K0K1B3 111 aa10.16□□□□□ -0.78
TRIM13-202ENST00000378182 ATP5EP2Q5VTU8 51 aa10.16□□□□□ -0.78
TRIM13-202ENST00000378182 V9GYY9 64 aa10.16□□□□□ -0.78
TRIM13-202ENST00000378182 TIMM17BO60830 172 aa10.16□□□□□ -0.78
TRIM13-202ENST00000378182 IGKV2D-30A0A075B6S6 120 aa10.15□□□□□ -0.78
TRIM13-202ENST00000378182 UQCRQO14949 82 aa10.15□□□□□ -0.78
TRIM13-202ENST00000378182 IGKV2-30P06310 120 aa10.15□□□□□ -0.78
TRIM13-202ENST00000378182 BDP1A6H8Y1 2624 aa10.15□□□□□ -0.78
TRIM13-202ENST00000378182 C11orf21Q9P2W6 132 aa10.15□□□□□ -0.78
TRIM13-202ENST00000378182 MDFIQ99750 246 aa10.15□□□□□ -0.79
TRIM13-202ENST00000378182 P0C879 139 aa10.14□□□□□ -0.79
TRIM13-202ENST00000378182 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.14□□□□□ -0.79
TRIM13-202ENST00000378182 ODF3L2Q3SX64 289 aa10.13□□□□□ -0.79
TRIM13-202ENST00000378182 C7orf65Q6ZTY9 151 aa10.13□□□□□ -0.79
TRIM13-202ENST00000378182 FAM229AH3BQW9 127 aa10.13□□□□□ -0.79
TRIM13-202ENST00000378182 EIF4EBP1Q13541 118 aaPredicted RBP10.12□□□□□ -0.79
TRIM13-202ENST00000378182 KLLNB2CW77 178 aa10.12□□□□□ -0.79
TRIM13-202ENST00000378182 Q8N6K4 173 aa10.12□□□□□ -0.79
TRIM13-202ENST00000378182 C11orf1Q9H5F2 150 aa10.12□□□□□ -0.79
TRIM13-202ENST00000378182 J3QL48 77 aa10.12□□□□□ -0.79
TRIM13-202ENST00000378182 CUL9Q8IWT3 2517 aa10.12□□□□□ -0.79
TRIM13-202ENST00000378182 FHL2Q14192 279 aa10.12□□□□□ -0.79
TRIM13-202ENST00000378182 LINC00694P0DN24 101 aa10.11□□□□□ -0.79
TRIM13-202ENST00000378182 BEAN1Q3B7T3 259 aa10.11□□□□□ -0.79
TRIM13-202ENST00000378182 A8MTW9 85 aa10.11□□□□□ -0.79
TRIM13-202ENST00000378182 MRPS36P82909 103 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms