RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 BIRC6Q9NR09 4857 aa8.66□□□□□ -1.02
CKAP2-202ENST00000378034 S100A12P80511 92 aa8.66□□□□□ -1.02
CKAP2-202ENST00000378034 PKHD1P08F94 4074 aa8.65□□□□□ -1.02
CKAP2-202ENST00000378034 PCP4L1A6NKN8 68 aa8.65□□□□□ -1.02
CKAP2-202ENST00000378034 FUSP35637 526 aaKnown RBP eCLIP8.65□□□□□ -1.02
CKAP2-202ENST00000378034 C15orf56Q8N910 161 aa8.65□□□□□ -1.02
CKAP2-202ENST00000378034 CHCHD1Q96BP2 118 aaKnown RBP8.65□□□□□ -1.02
CKAP2-202ENST00000378034 IGHV1-58A0A0C4DH39 117 aa8.64□□□□□ -1.03
CKAP2-202ENST00000378034 hDV102S1A0JD36 115 aa8.64□□□□□ -1.03
CKAP2-202ENST00000378034 COX7A2LO14548 114 aa8.64□□□□□ -1.03
CKAP2-202ENST00000378034 NDUFA6P56556 154 aa8.64□□□□□ -1.03
CKAP2-202ENST00000378034 GVQW2A0A096LPI5 108 aaPredicted RBP8.63□□□□□ -1.03
CKAP2-202ENST00000378034 HBDP02042 147 aa8.63□□□□□ -1.03
CKAP2-202ENST00000378034 UBE2D1P51668 147 aa8.63□□□□□ -1.03
CKAP2-202ENST00000378034 CNBPP62633 177 aaKnown RBP8.63□□□□□ -1.03
CKAP2-202ENST00000378034 LINC00173Q6ZV60 143 aa8.63□□□□□ -1.03
CKAP2-202ENST00000378034 IGHV3OR16-9A0A0B4J2B5 98 aa8.62□□□□□ -1.03
CKAP2-202ENST00000378034 MALP21145 153 aa8.62□□□□□ -1.03
CKAP2-202ENST00000378034 FAM19A3Q7Z5A8 133 aa8.62□□□□□ -1.03
CKAP2-202ENST00000378034 A0A096LNJ9 63 aa8.62□□□□□ -1.03
CKAP2-202ENST00000378034 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.62□□□□□ -1.03
CKAP2-202ENST00000378034 CDK2AP2O75956 126 aa8.62□□□□□ -1.03
CKAP2-202ENST00000378034 APOMO95445 188 aa8.62□□□□□ -1.03
CKAP2-202ENST00000378034 KRTAP10-1P60331 282 aa8.62□□□□□ -1.03
CKAP2-202ENST00000378034 SEC11AP67812 179 aa8.62□□□□□ -1.03
CKAP2-202ENST00000378034 LINC00242Q5T6M2 205 aa8.62□□□□□ -1.03
CKAP2-202ENST00000378034 BAGE3Q86Y29 109 aa8.62□□□□□ -1.03
CKAP2-202ENST00000378034 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.61□□□□□ -1.03
CKAP2-202ENST00000378034 S100A2P29034 98 aa8.61□□□□□ -1.03
CKAP2-202ENST00000378034 PDZD11Q5EBL8 140 aa8.61□□□□□ -1.03
CKAP2-202ENST00000378034 C5orf38Q86SI9 138 aa8.61□□□□□ -1.03
CKAP2-202ENST00000378034 HIST3H2BBQ8N257 126 aa8.61□□□□□ -1.03
CKAP2-202ENST00000378034 DYNC1H1Q14204 4646 aaKnown RBP8.6□□□□□ -1.03
CKAP2-202ENST00000378034 ATP5LO75964 103 aa8.6□□□□□ -1.03
CKAP2-202ENST00000378034 HIGD2BQ4VC39 106 aa8.6□□□□□ -1.03
CKAP2-202ENST00000378034 ZC2HC1BQ5TFG8 222 aa8.6□□□□□ -1.03
CKAP2-202ENST00000378034 C9orf163Q8N9P6 203 aa8.6□□□□□ -1.03
CKAP2-202ENST00000378034 PMVKQ15126 192 aa8.59□□□□□ -1.03
CKAP2-202ENST00000378034 LINC01561Q8N1V8 128 aa8.59□□□□□ -1.03
CKAP2-202ENST00000378034 DNAH5Q8TE73 4624 aa8.59□□□□□ -1.03
CKAP2-202ENST00000378034 A0A087WZ39 114 aa8.59□□□□□ -1.03
CKAP2-202ENST00000378034 ZNF561-AS1K7EIQ3 104 aa8.59□□□□□ -1.03
CKAP2-202ENST00000378034 HSBP1O75506 76 aa8.59□□□□□ -1.03
CKAP2-202ENST00000378034 HERVK_113P63121 156 aa8.59□□□□□ -1.03
CKAP2-202ENST00000378034 PMCHL1Q16048 86 aa8.59□□□□□ -1.03
CKAP2-202ENST00000378034 OR10D4PQ8NGN7 298 aa8.59□□□□□ -1.03
CKAP2-202ENST00000378034 CST9LQ9H4G1 147 aa8.59□□□□□ -1.03
CKAP2-202ENST00000378034 SLPIP03973 132 aa8.58□□□□□ -1.04
CKAP2-202ENST00000378034 COX6A2Q02221 97 aa8.58□□□□□ -1.04
CKAP2-202ENST00000378034 COA6Q5JTJ3 125 aaKnown RBP8.58□□□□□ -1.04
CKAP2-202ENST00000378034 IGHV3-64A0A075B6Q5 118 aa8.57□□□□□ -1.04
CKAP2-202ENST00000378034 F8WDY8 70 aa8.57□□□□□ -1.04
CKAP2-202ENST00000378034 PYY3Q5JQD4 70 aa8.57□□□□□ -1.04
CKAP2-202ENST00000378034 C2orf48Q96LS8 159 aa8.57□□□□□ -1.04
CKAP2-202ENST00000378034 GEMIN7Q9H840 131 aaKnown RBP8.57□□□□□ -1.04
CKAP2-202ENST00000378034 TINCRA0A1B0GVN0 87 aa8.56□□□□□ -1.04
CKAP2-202ENST00000378034 A0A0J9YXV3 536 aa8.55□□□□□ -1.04
CKAP2-202ENST00000378034 SERF1AO75920 110 aa8.55□□□□□ -1.04
CKAP2-202ENST00000378034 CTAG1AP78358 180 aa8.55□□□□□ -1.04
CKAP2-202ENST00000378034 LINC01620Q4KN68 170 aa8.55□□□□□ -1.04
CKAP2-202ENST00000378034 Q6ZSA8 131 aa8.55□□□□□ -1.04
CKAP2-202ENST00000378034 ORAOV1Q8WV07 137 aa8.55□□□□□ -1.04
CKAP2-202ENST00000378034 LRP1BQ9NZR2 4599 aa8.55□□□□□ -1.04
CKAP2-202ENST00000378034 IGLV4-69A0A075B6H9 119 aa8.55□□□□□ -1.04
CKAP2-202ENST00000378034 SPAG11BQ08648 103 aa8.55□□□□□ -1.04
CKAP2-202ENST00000378034 PKIGQ9Y2B9 76 aa8.55□□□□□ -1.04
CKAP2-202ENST00000378034 FABP4P15090 132 aa8.54□□□□□ -1.04
CKAP2-202ENST00000378034 LINC00310P59036 64 aa8.54□□□□□ -1.04
CKAP2-202ENST00000378034 SYCNQ0VAF6 134 aa8.54□□□□□ -1.04
CKAP2-202ENST00000378034 SDIM1Q6ZPB5 146 aa8.54□□□□□ -1.04
CKAP2-202ENST00000378034 HIST1H2BLQ99880 126 aa8.54□□□□□ -1.04
CKAP2-202ENST00000378034 IGLV5-45A0A087WSX0 123 aa8.53□□□□□ -1.04
CKAP2-202ENST00000378034 FAM19A2Q8N3H0 131 aa8.53□□□□□ -1.04
CKAP2-202ENST00000378034 IFI27L1Q96BM0 104 aa8.53□□□□□ -1.04
CKAP2-202ENST00000378034 CARD19Q96LW7 228 aa8.53□□□□□ -1.04
CKAP2-202ENST00000378034 PACRGQ96M98 296 aaPredicted RBP8.53□□□□□ -1.04
CKAP2-202ENST00000378034 CDKN2A-AS1Q9UH64 79 aa8.53□□□□□ -1.04
CKAP2-202ENST00000378034 XGP55808 180 aa8.53□□□□□ -1.04
CKAP2-202ENST00000378034 LINC00526Q96FQ7 95 aa8.53□□□□□ -1.04
CKAP2-202ENST00000378034 CAMK2N2Q96S95 79 aa8.53□□□□□ -1.04
CKAP2-202ENST00000378034 FAM30AQ9NZY2 134 aa8.53□□□□□ -1.04
CKAP2-202ENST00000378034 IGLC3P0DOY3 106 aa8.52□□□□□ -1.05
CKAP2-202ENST00000378034 LINC00469Q8N7U9 141 aa8.52□□□□□ -1.05
CKAP2-202ENST00000378034 TRAV12-1A0A0B4J245 112 aa8.52□□□□□ -1.05
CKAP2-202ENST00000378034 LINC00587B1AMM8 73 aa8.52□□□□□ -1.05
CKAP2-202ENST00000378034 LEPROTL1O95214 131 aa8.52□□□□□ -1.05
CKAP2-202ENST00000378034 KIAA0087Q14695 138 aa8.51□□□□□ -1.05
CKAP2-202ENST00000378034 RNF151Q2KHN1 245 aa8.51□□□□□ -1.05
CKAP2-202ENST00000378034 H3BRM9 83 aa8.5□□□□□ -1.05
CKAP2-202ENST00000378034 NDUFA1O15239 70 aa8.5□□□□□ -1.05
CKAP2-202ENST00000378034 NUPR1O60356 82 aa8.5□□□□□ -1.05
CKAP2-202ENST00000378034 Q6ZRU5 148 aa8.5□□□□□ -1.05
CKAP2-202ENST00000378034 HSPB8Q9UJY1 196 aa8.5□□□□□ -1.05
CKAP2-202ENST00000378034 Q8IZM0 81 aa8.5□□□□□ -1.05
CKAP2-202ENST00000378034 CHAC1Q9BUX1 264 aa8.5□□□□□ -1.05
CKAP2-202ENST00000378034 MRPL35Q9NZE8 188 aaKnown RBP8.5□□□□□ -1.05
CKAP2-202ENST00000378034 PRSS2P07478 247 aa8.49□□□□□ -1.05
CKAP2-202ENST00000378034 JOSD1Q15040 202 aaPredicted RBP8.49□□□□□ -1.05
CKAP2-202ENST00000378034 CHTOPQ9Y3Y2 248 aaKnown RBP8.49□□□□□ -1.05
CKAP2-202ENST00000378034 KIAA1109Q2LD37 5005 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms