RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 Q96MF0 132 aa11.19□□□□□ -0.62
CSNK1A1-202ENST00000377843 BPESC1Q9GZL8 116 aa11.19□□□□□ -0.62
CSNK1A1-202ENST00000377843 WFDC9Q8NEX5 89 aa11.19□□□□□ -0.62
CSNK1A1-202ENST00000377843 ABCA12Q86UK0 2595 aa11.18□□□□□ -0.62
CSNK1A1-202ENST00000377843 CRPP02741 224 aa11.18□□□□□ -0.62
CSNK1A1-202ENST00000377843 SLPIP03973 132 aa11.18□□□□□ -0.62
CSNK1A1-202ENST00000377843 TRAV13-2A0A0B4J235 113 aa11.17□□□□□ -0.62
CSNK1A1-202ENST00000377843 C10orf99Q6UWK7 81 aa11.17□□□□□ -0.62
CSNK1A1-202ENST00000377843 SS18Q15532 418 aa11.16□□□□□ -0.62
CSNK1A1-202ENST00000377843 LECT2O14960 151 aa11.15□□□□□ -0.62
CSNK1A1-202ENST00000377843 MIR7-3HGQ8N6C7 128 aa11.15□□□□□ -0.62
CSNK1A1-202ENST00000377843 H3BUX3 64 aa11.15□□□□□ -0.63
CSNK1A1-202ENST00000377843 IGHV3-53P01767 116 aa11.15□□□□□ -0.63
CSNK1A1-202ENST00000377843 SND1-IT1Q9HBX3 110 aa11.15□□□□□ -0.63
CSNK1A1-202ENST00000377843 UBR5O95071 2799 aaPredicted RBP11.14□□□□□ -0.63
CSNK1A1-202ENST00000377843 RBMY1BA6NDE4 496 aaKnown RBP11.14□□□□□ -0.63
CSNK1A1-202ENST00000377843 RBMY1EA6NEQ0 496 aaKnown RBP11.14□□□□□ -0.63
CSNK1A1-202ENST00000377843 RBMY1DP0C7P1 496 aaKnown RBP11.14□□□□□ -0.63
CSNK1A1-202ENST00000377843 CFHR3Q02985 330 aa11.14□□□□□ -0.63
CSNK1A1-202ENST00000377843 ABCA2Q9BZC7 2435 aa11.14□□□□□ -0.63
CSNK1A1-202ENST00000377843 PTPN13Q12923 2485 aa11.14□□□□□ -0.63
CSNK1A1-202ENST00000377843 PF4P02776 101 aa11.14□□□□□ -0.63
CSNK1A1-202ENST00000377843 FAM19A3Q7Z5A8 133 aa11.14□□□□□ -0.63
CSNK1A1-202ENST00000377843 USP9YO00507 2555 aaPredicted RBP11.14□□□□□ -0.63
CSNK1A1-202ENST00000377843 ZANQ9Y493 2812 aa11.13□□□□□ -0.63
CSNK1A1-202ENST00000377843 GHRHP01286 108 aa11.13□□□□□ -0.63
CSNK1A1-202ENST00000377843 IGHV4-38-2P0DP08 117 aa11.13□□□□□ -0.63
CSNK1A1-202ENST00000377843 TENM4Q6N022 2769 aa11.13□□□□□ -0.63
CSNK1A1-202ENST00000377843 TRAV23DV6A0A075B6W5 121 aa11.13□□□□□ -0.63
CSNK1A1-202ENST00000377843 FAM19A1Q7Z5A9 133 aa11.13□□□□□ -0.63
CSNK1A1-202ENST00000377843 A6NDX4 124 aa11.12□□□□□ -0.63
CSNK1A1-202ENST00000377843 NTM-AS1Q6ZSK4 140 aa11.11□□□□□ -0.63
CSNK1A1-202ENST00000377843 OVOL2Q9BRP0 275 aa11.11□□□□□ -0.63
CSNK1A1-202ENST00000377843 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.1□□□□□ -0.632e-6■■■□□ 18.1
CSNK1A1-202ENST00000377843 C20orf197Q8N268 126 aa11.1□□□□□ -0.63
CSNK1A1-202ENST00000377843 ZNF843Q8N446 348 aa11.1□□□□□ -0.63
CSNK1A1-202ENST00000377843 C11orf72Q8NBR9 251 aa11.1□□□□□ -0.63
CSNK1A1-202ENST00000377843 CCL18P55774 89 aa11.09□□□□□ -0.63
CSNK1A1-202ENST00000377843 RPL36AP83881 106 aaKnown RBP11.09□□□□□ -0.63
CSNK1A1-202ENST00000377843 RPL36ALQ969Q0 106 aaKnown RBP11.09□□□□□ -0.63
CSNK1A1-202ENST00000377843 CCKP06307 115 aa11.09□□□□□ -0.63
CSNK1A1-202ENST00000377843 PFN2P35080 140 aa11.09□□□□□ -0.63
CSNK1A1-202ENST00000377843 TMEM243Q9BU79 118 aa11.08□□□□□ -0.64
CSNK1A1-202ENST00000377843 CDC42SE2Q9NRR3 84 aa11.08□□□□□ -0.64
CSNK1A1-202ENST00000377843 CREBBPQ92793 2442 aa11.08□□□□□ -0.64
CSNK1A1-202ENST00000377843 H0YGX0 51 aa11.08□□□□□ -0.64
CSNK1A1-202ENST00000377843 NDUFC2O95298 119 aa11.08□□□□□ -0.64
CSNK1A1-202ENST00000377843 PSMB8P28062 276 aa11.08□□□□□ -0.64
CSNK1A1-202ENST00000377843 ENHOQ6UWT2 76 aa11.08□□□□□ -0.64
CSNK1A1-202ENST00000377843 LINC00336Q6ZUF6 198 aa11.08□□□□□ -0.64
CSNK1A1-202ENST00000377843 ZNF469Q96JG9 3925 aaPredicted RBP11.07□□□□□ -0.64
CSNK1A1-202ENST00000377843 DEFB131AP59861 70 aa11.07□□□□□ -0.64
CSNK1A1-202ENST00000377843 MRAPQ8TCY5 172 aa11.07□□□□□ -0.64
CSNK1A1-202ENST00000377843 EPM2AB3EWF7 344 aa11.06□□□□□ -0.64
CSNK1A1-202ENST00000377843 NDUFC2-KCTD14E9PQ53 114 aa11.06□□□□□ -0.64
CSNK1A1-202ENST00000377843 XCL1P47992 114 aa11.06□□□□□ -0.64
CSNK1A1-202ENST00000377843 LINC00158P58513 81 aa11.06□□□□□ -0.64
CSNK1A1-202ENST00000377843 TOMM7Q9P0U1 55 aa11.06□□□□□ -0.64
CSNK1A1-202ENST00000377843 XCL2Q9UBD3 114 aa11.06□□□□□ -0.64
CSNK1A1-202ENST00000377843 FAM236DA0A1B0GTK5 79 aa11.05□□□□□ -0.64
CSNK1A1-202ENST00000377843 FAM236CP0DP71 79 aa11.05□□□□□ -0.64
CSNK1A1-202ENST00000377843 COX7B2Q8TF08 81 aa11.05□□□□□ -0.64
CSNK1A1-202ENST00000377843 CUBNO60494 3623 aa11.04□□□□□ -0.64
CSNK1A1-202ENST00000377843 H7BZZ5 65 aa11.03□□□□□ -0.64
CSNK1A1-202ENST00000377843 ORMDL1Q9P0S3 153 aa11.03□□□□□ -0.64
CSNK1A1-202ENST00000377843 ANKRD17O75179 2603 aaKnown RBP11.03□□□□□ -0.64
CSNK1A1-202ENST00000377843 HELZ2Q9BYK8 2649 aaKnown RBP11.03□□□□□ -0.64
CSNK1A1-202ENST00000377843 TMEM89A2RUT3 159 aa11.02□□□□□ -0.65
CSNK1A1-202ENST00000377843 NAV2Q8IVL1 2488 aa11.02□□□□□ -0.65
CSNK1A1-202ENST00000377843 LYPD5Q6UWN5 251 aa11.02□□□□□ -0.65
CSNK1A1-202ENST00000377843 C2CD3Q4AC94 2353 aa11.02□□□□□ -0.65
CSNK1A1-202ENST00000377843 A8MTW9 85 aa11.01□□□□□ -0.65
CSNK1A1-202ENST00000377843 CCL19Q99731 98 aa11.01□□□□□ -0.65
CSNK1A1-202ENST00000377843 PAX4O43316 350 aa11□□□□□ -0.65
CSNK1A1-202ENST00000377843 PRO0628Q9UI54 55 aa11□□□□□ -0.65
CSNK1A1-202ENST00000377843 APCP25054 2843 aa11□□□□□ -0.65
CSNK1A1-202ENST00000377843 CCDC168Q8NDH2 2452 aa11□□□□□ -0.65
CSNK1A1-202ENST00000377843 IGHV4-61A0A0C4DH41 118 aa10.99□□□□□ -0.65
CSNK1A1-202ENST00000377843 IGKV3OR2-268A0A0C4DH90 116 aa10.99□□□□□ -0.65
CSNK1A1-202ENST00000377843 CSPG4Q6UVK1 2322 aa10.99□□□□□ -0.65
CSNK1A1-202ENST00000377843 ATP5EP2Q5VTU8 51 aa10.99□□□□□ -0.65
CSNK1A1-202ENST00000377843 C16orf95Q9H693 158 aa10.99□□□□□ -0.65
CSNK1A1-202ENST00000377843 SERP1Q9Y6X1 66 aa10.99□□□□□ -0.65
CSNK1A1-202ENST00000377843 Q6ZTI0 123 aa10.98□□□□□ -0.65
CSNK1A1-202ENST00000377843 MAPK1IP1LQ8NDC0 245 aa10.98□□□□□ -0.65
CSNK1A1-202ENST00000377843 J3QLI3 93 aa10.98□□□□□ -0.65
CSNK1A1-202ENST00000377843 KRTAP10-9P60411 292 aa10.98□□□□□ -0.65
CSNK1A1-202ENST00000377843 FP248Q71RG6 208 aaPredicted RBP10.98□□□□□ -0.65
CSNK1A1-202ENST00000377843 A0A096LNT2 108 aa10.97□□□□□ -0.65
CSNK1A1-202ENST00000377843 TLN2Q9Y4G6 2542 aa10.97□□□□□ -0.65
CSNK1A1-202ENST00000377843 AVPP01185 164 aa10.97□□□□□ -0.65
CSNK1A1-202ENST00000377843 S100A7L2Q5SY68 101 aa10.97□□□□□ -0.65
CSNK1A1-202ENST00000377843 LINC00167Q96N53 147 aa10.97□□□□□ -0.65
CSNK1A1-202ENST00000377843 TRBV6-4A0A1B0GX49 114 aa10.96□□□□□ -0.65
CSNK1A1-202ENST00000377843 LY6G6DO95868 133 aa10.96□□□□□ -0.65
CSNK1A1-202ENST00000377843 IGHV4-30-2A0A087WSY4 118 aa10.96□□□□□ -0.66
CSNK1A1-202ENST00000377843 TRGV1A0A0A0MS02 117 aa10.96□□□□□ -0.66
CSNK1A1-202ENST00000377843 K7EQD1 137 aa10.95□□□□□ -0.66
CSNK1A1-202ENST00000377843 NANOS2P60321 138 aaKnown RBP10.95□□□□□ -0.66
CSNK1A1-202ENST00000377843 SNURFQ9Y675 71 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms