RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 F8P00451 2351 aa8.66□□□□□ -1.02
VPS13A-205ENST00000376636 TRBV7-7A0A0K0K1E9 115 aa8.66□□□□□ -1.02
VPS13A-205ENST00000376636 E7EUB6 86 aa8.66□□□□□ -1.02
VPS13A-205ENST00000376636 TRAV10A0A0B4J240 114 aa8.65□□□□□ -1.02
VPS13A-205ENST00000376636 DEFB1P60022 68 aa8.65□□□□□ -1.02
VPS13A-205ENST00000376636 POM121L12Q8N7R1 296 aa8.65□□□□□ -1.02
VPS13A-205ENST00000376636 IGF2-ASQ6U949 168 aa8.65□□□□□ -1.02
VPS13A-205ENST00000376636 Q8IZM0 81 aa8.65□□□□□ -1.02
VPS13A-205ENST00000376636 ZFHX2Q9C0A1 2572 aaPredicted RBP8.65□□□□□ -1.02
VPS13A-205ENST00000376636 hDV103S1A0JD37 113 aa8.65□□□□□ -1.02
VPS13A-205ENST00000376636 CXCL6P80162 114 aa8.65□□□□□ -1.02
VPS13A-205ENST00000376636 RPL37AP8A6NKH3 93 aa8.65□□□□□ -1.03
VPS13A-205ENST00000376636 SPAG11AQ6PDA7 123 aa8.65□□□□□ -1.03
VPS13A-205ENST00000376636 C1orf137Q5JT78 98 aa8.64□□□□□ -1.03
VPS13A-205ENST00000376636 GRNP28799 593 aaKnown RBP8.64□□□□□ -1.03
VPS13A-205ENST00000376636 MAPKAPK5-AS1Q8N8E1 139 aa8.64□□□□□ -1.03
VPS13A-205ENST00000376636 CLUHP3Q96NS8 147 aa8.64□□□□□ -1.03
VPS13A-205ENST00000376636 H0Y9P7 68 aa8.64□□□□□ -1.03
VPS13A-205ENST00000376636 Q8N814 137 aa8.64□□□□□ -1.03
VPS13A-205ENST00000376636 TLN2Q9Y4G6 2542 aa8.64□□□□□ -1.03
VPS13A-205ENST00000376636 PLA2G2CQ5R387 149 aa8.64□□□□□ -1.03
VPS13A-205ENST00000376636 Q6ZSR3 168 aa8.64□□□□□ -1.03
VPS13A-205ENST00000376636 FRMD6-AS1P0C7T7 363 aa8.64□□□□□ -1.03
VPS13A-205ENST00000376636 LELP1Q5T871 98 aa8.64□□□□□ -1.03
VPS13A-205ENST00000376636 U3KQA8 63 aa8.64□□□□□ -1.03
VPS13A-205ENST00000376636 REG3GQ6UW15 175 aa8.63□□□□□ -1.03
VPS13A-205ENST00000376636 DAZAP2Q15038 168 aaPredicted RBP8.63□□□□□ -1.03
VPS13A-205ENST00000376636 IGHV6-1A0A0B4J1U7 121 aa8.63□□□□□ -1.03
VPS13A-205ENST00000376636 C2orf91Q6ZV80 131 aa8.63□□□□□ -1.03
VPS13A-205ENST00000376636 K7EQG2 157 aa8.63□□□□□ -1.03
VPS13A-205ENST00000376636 ZFP36P26651 326 aaKnown RBP8.63□□□□□ -1.03
VPS13A-205ENST00000376636 COL4A6Q14031 1691 aa8.63□□□□□ -1.03
VPS13A-205ENST00000376636 CRYGAP11844 174 aa8.63□□□□□ -1.03
VPS13A-205ENST00000376636 GDF5OSQ5U4N7 250 aa8.63□□□□□ -1.03
VPS13A-205ENST00000376636 PLA2G2EQ9NZK7 142 aa8.63□□□□□ -1.03
VPS13A-205ENST00000376636 ACANP16112 2415 aa8.63□□□□□ -1.03
VPS13A-205ENST00000376636 PLA2G2AP14555 144 aa8.62□□□□□ -1.03
VPS13A-205ENST00000376636 Q8N3U1 123 aa8.62□□□□□ -1.03
VPS13A-205ENST00000376636 CIRBP-AS1Q8TBR5 109 aa8.62□□□□□ -1.03
VPS13A-205ENST00000376636 DEFB114Q30KQ6 69 aa8.62□□□□□ -1.03
VPS13A-205ENST00000376636 Q8N7P7 452 aa8.62□□□□□ -1.03
VPS13A-205ENST00000376636 ZNF843Q8N446 348 aa8.62□□□□□ -1.03
VPS13A-205ENST00000376636 EIF4EBP1Q13541 118 aaPredicted RBP8.61□□□□□ -1.03
VPS13A-205ENST00000376636 IGLV2-8P01709 118 aa8.61□□□□□ -1.03
VPS13A-205ENST00000376636 TSHBP01222 138 aa8.6□□□□□ -1.03
VPS13A-205ENST00000376636 IGFL2Q6UWQ7 119 aa8.6□□□□□ -1.03
VPS13A-205ENST00000376636 TNFRSF13BO14836 293 aaPredicted RBP8.6□□□□□ -1.03
VPS13A-205ENST00000376636 BEAN1Q3B7T3 259 aa8.6□□□□□ -1.03
VPS13A-205ENST00000376636 ODF3BA8MYP8 253 aa8.6□□□□□ -1.03
VPS13A-205ENST00000376636 ZNF462Q96JM2 2506 aa8.59□□□□□ -1.03
VPS13A-205ENST00000376636 KPRPQ5T749 579 aaPredicted RBP8.59□□□□□ -1.03
VPS13A-205ENST00000376636 SPINK1P00995 79 aa8.59□□□□□ -1.03
VPS13A-205ENST00000376636 HCG22E2RYF7 251 aa8.59□□□□□ -1.04
VPS13A-205ENST00000376636 MRGPRG-AS1Q2M3A8 158 aa8.59□□□□□ -1.04
VPS13A-205ENST00000376636 LINC00574Q9H8X3 128 aa8.58□□□□□ -1.04
VPS13A-205ENST00000376636 PIP4P1Q86T03 277 aa8.58□□□□□ -1.04
VPS13A-205ENST00000376636 LINC00959A0A1B0GUT2 108 aa8.58□□□□□ -1.04
VPS13A-205ENST00000376636 C11orf1Q9H5F2 150 aa8.58□□□□□ -1.04
VPS13A-205ENST00000376636 TMEM254Q8TBM7 123 aa8.58□□□□□ -1.04
VPS13A-205ENST00000376636 PRORYQ9H606 182 aa8.57□□□□□ -1.04
VPS13A-205ENST00000376636 A0A1B0GU69 56 aa8.57□□□□□ -1.04
VPS13A-205ENST00000376636 P0C879 139 aa8.57□□□□□ -1.04
VPS13A-205ENST00000376636 TRBV10-3A0A0K0K1G6 114 aa8.57□□□□□ -1.04
VPS13A-205ENST00000376636 LINC00575Q6W349 94 aa8.57□□□□□ -1.04
VPS13A-205ENST00000376636 MBD6Q96DN6 1003 aa8.56□□□□□ -1.04
VPS13A-205ENST00000376636 F8WDY8 70 aa8.56□□□□□ -1.04
VPS13A-205ENST00000376636 C8orf87E5RJ46 101 aa8.55□□□□□ -1.04
VPS13A-205ENST00000376636 Q6YL49 198 aa8.55□□□□□ -1.04
VPS13A-205ENST00000376636 BBC3Q96PG8 261 aaPredicted RBP8.55□□□□□ -1.04
VPS13A-205ENST00000376636 FN1P02751 2386 aaKnown RBP8.55□□□□□ -1.04
VPS13A-205ENST00000376636 NRGNQ92686 78 aa8.55□□□□□ -1.04
VPS13A-205ENST00000376636 PCOTHQ58A44 107 aa8.54□□□□□ -1.04
VPS13A-205ENST00000376636 C7orf65Q6ZTY9 151 aa8.54□□□□□ -1.04
VPS13A-205ENST00000376636 CYSRT1A8MQ03 144 aa8.54□□□□□ -1.04
VPS13A-205ENST00000376636 ADORA2A-AS1P86434 159 aa8.54□□□□□ -1.04
VPS13A-205ENST00000376636 EGFEM1PQ0D2K5 195 aa8.54□□□□□ -1.04
VPS13A-205ENST00000376636 Q8N6K4 173 aa8.54□□□□□ -1.04
VPS13A-205ENST00000376636 SHISA2Q6UWI4 295 aa8.54□□□□□ -1.04
VPS13A-205ENST00000376636 FSTL3O95633 263 aa8.53□□□□□ -1.04
VPS13A-205ENST00000376636 PLA2G1BP04054 148 aaKnown RBP8.53□□□□□ -1.04
VPS13A-205ENST00000376636 TP53AIP1Q9HCN2 124 aa8.53□□□□□ -1.04
VPS13A-205ENST00000376636 FBXL19-AS1Q494R0 122 aa8.53□□□□□ -1.04
VPS13A-205ENST00000376636 SPINT4Q6UDR6 99 aa8.53□□□□□ -1.04
VPS13A-205ENST00000376636 CNFNQ9BYD5 112 aa8.52□□□□□ -1.04
VPS13A-205ENST00000376636 ZNF702PQ9H963 129 aa8.52□□□□□ -1.04
VPS13A-205ENST00000376636 ACYP2P14621 99 aa8.52□□□□□ -1.05
VPS13A-205ENST00000376636 Q6ZS46 218 aa8.52□□□□□ -1.05
VPS13A-205ENST00000376636 Q9BRP9 147 aa8.52□□□□□ -1.05
VPS13A-205ENST00000376636 CRIP1P50238 77 aa8.52□□□□□ -1.05
VPS13A-205ENST00000376636 SBSPONQ8IVN8 264 aa8.51□□□□□ -1.05
VPS13A-205ENST00000376636 PRLHP81277 87 aa8.51□□□□□ -1.05
VPS13A-205ENST00000376636 CDC42SE2Q9NRR3 84 aa8.51□□□□□ -1.05
VPS13A-205ENST00000376636 IGLV2-18A0A075B6J9 118 aa8.51□□□□□ -1.05
VPS13A-205ENST00000376636 KLLNB2CW77 178 aa8.51□□□□□ -1.05
VPS13A-205ENST00000376636 NUPR2A6NF83 97 aa8.51□□□□□ -1.05
VPS13A-205ENST00000376636 RNASE3P12724 160 aaKnown RBP8.5□□□□□ -1.05
VPS13A-205ENST00000376636 CHCHD7Q9BUK0 85 aa8.5□□□□□ -1.05
VPS13A-205ENST00000376636 A0A087WVE0 104 aa8.5□□□□□ -1.05
VPS13A-205ENST00000376636 C1orf64Q8NEQ6 169 aa8.5□□□□□ -1.05
VPS13A-205ENST00000376636 FSHBP01225 129 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms