RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 PPDPFQ9H3Y8 114 aa9.3□□□□□ -0.92
VPS13A-204ENST00000376634 COX7CP15954 63 aa9.3□□□□□ -0.92
VPS13A-204ENST00000376634 M0R378 163 aa9.3□□□□□ -0.92
VPS13A-204ENST00000376634 FBXL19-AS1Q494R0 122 aa9.3□□□□□ -0.92
VPS13A-204ENST00000376634 C6orf99Q4VX62 202 aa9.3□□□□□ -0.92
VPS13A-204ENST00000376634 ZNF22P17026 224 aaPredicted RBP9.29□□□□□ -0.92
VPS13A-204ENST00000376634 K7EQG2 157 aa9.29□□□□□ -0.92
VPS13A-204ENST00000376634 CCDC179H3BU77 68 aa9.29□□□□□ -0.92
VPS13A-204ENST00000376634 KPRPQ5T749 579 aaPredicted RBP9.28□□□□□ -0.92
VPS13A-204ENST00000376634 C22orf34Q6ZV56 151 aa9.28□□□□□ -0.92
VPS13A-204ENST00000376634 WFDC10AQ9H1F0 79 aa9.28□□□□□ -0.92
VPS13A-204ENST00000376634 FRMD6-AS1P0C7T7 363 aa9.28□□□□□ -0.92
VPS13A-204ENST00000376634 LRRC75A-AS1Q8N1F1 130 aa9.28□□□□□ -0.92
VPS13A-204ENST00000376634 TRBV6-4A0A1B0GX49 114 aa9.28□□□□□ -0.92
VPS13A-204ENST00000376634 Q6ZSR3 168 aa9.28□□□□□ -0.92
VPS13A-204ENST00000376634 MRPS12O15235 138 aaKnown RBP9.27□□□□□ -0.92
VPS13A-204ENST00000376634 IGF1P05019 195 aa9.27□□□□□ -0.92
VPS13A-204ENST00000376634 PLA2G2EQ9NZK7 142 aa9.27□□□□□ -0.92
VPS13A-204ENST00000376634 SHISA2Q6UWI4 295 aa9.27□□□□□ -0.92
VPS13A-204ENST00000376634 RPL37AP8A6NKH3 93 aa9.27□□□□□ -0.93
VPS13A-204ENST00000376634 U3KQK5 164 aa9.27□□□□□ -0.93
VPS13A-204ENST00000376634 PLAC8L1A1L4L8 177 aa9.27□□□□□ -0.93
VPS13A-204ENST00000376634 IGLV2-18A0A075B6J9 118 aa9.27□□□□□ -0.93
VPS13A-204ENST00000376634 SMIM26A0A096LP01 95 aa9.27□□□□□ -0.93
VPS13A-204ENST00000376634 INAFM1C9JVW0 142 aa9.27□□□□□ -0.93
VPS13A-204ENST00000376634 LINC00574Q9H8X3 128 aa9.26□□□□□ -0.93
VPS13A-204ENST00000376634 LINC00694P0DN24 101 aa9.26□□□□□ -0.93
VPS13A-204ENST00000376634 M0R2N4 97 aa9.26□□□□□ -0.93
VPS13A-204ENST00000376634 GDF5OSQ5U4N7 250 aa9.25□□□□□ -0.93
VPS13A-204ENST00000376634 IGLV4-69A0A075B6H9 119 aa9.25□□□□□ -0.93
VPS13A-204ENST00000376634 ZNF73O43830 326 aaPredicted RBP9.25□□□□□ -0.93
VPS13A-204ENST00000376634 COL4A3Q01955 1670 aa9.25□□□□□ -0.93
VPS13A-204ENST00000376634 TRBV7-6A0A0J9YX20 115 aa9.25□□□□□ -0.93
VPS13A-204ENST00000376634 Q6ZQY7 126 aa9.25□□□□□ -0.93
VPS13A-204ENST00000376634 ESRGQ1W209 222 aa9.24□□□□□ -0.93
VPS13A-204ENST00000376634 LELP1Q5T871 98 aa9.24□□□□□ -0.93
VPS13A-204ENST00000376634 HECTD1Q9ULT8 2610 aa9.24□□□□□ -0.93
VPS13A-204ENST00000376634 CENPFP49454 3210 aa9.24□□□□□ -0.93
VPS13A-204ENST00000376634 LY6G6CO95867 125 aa9.24□□□□□ -0.93
VPS13A-204ENST00000376634 Q8N976 141 aa9.24□□□□□ -0.93
VPS13A-204ENST00000376634 P0C879 139 aa9.23□□□□□ -0.93
VPS13A-204ENST00000376634 LST1O00453 97 aa9.23□□□□□ -0.93
VPS13A-204ENST00000376634 PYGO1Q9Y3Y4 419 aa9.22□□□□□ -0.93
VPS13A-204ENST00000376634 LINC00482Q8N8I6 264 aa9.22□□□□□ -0.93
VPS13A-204ENST00000376634 BBC3Q96PG8 261 aaPredicted RBP9.22□□□□□ -0.93
VPS13A-204ENST00000376634 AKAP13Q12802 2813 aa9.22□□□□□ -0.93
VPS13A-204ENST00000376634 TRAV7A0A075B6U4 112 aa9.22□□□□□ -0.93
VPS13A-204ENST00000376634 LMO4P61968 165 aa9.22□□□□□ -0.93
VPS13A-204ENST00000376634 X6R8D5 127 aa9.22□□□□□ -0.93
VPS13A-204ENST00000376634 RBX1P62877 108 aa9.22□□□□□ -0.93
VPS13A-204ENST00000376634 LOC100131303A0A0U1RQF7 123 aa9.22□□□□□ -0.93
VPS13A-204ENST00000376634 CIRBP-AS1Q8TBR5 109 aa9.22□□□□□ -0.93
VPS13A-204ENST00000376634 TSHBP01222 138 aa9.21□□□□□ -0.93
VPS13A-204ENST00000376634 SMIM11BQ8TCY0 68 aa9.21□□□□□ -0.93
VPS13A-204ENST00000376634 IGLV2-8P01709 118 aa9.21□□□□□ -0.93
VPS13A-204ENST00000376634 RPL28P46779 137 aaKnown RBP9.21□□□□□ -0.93
VPS13A-204ENST00000376634 CLUHP3Q96NS8 147 aa9.21□□□□□ -0.93
VPS13A-204ENST00000376634 Q6JHZ5 121 aa9.21□□□□□ -0.94
VPS13A-204ENST00000376634 MUC7Q8TAX7 377 aa9.21□□□□□ -0.94
VPS13A-204ENST00000376634 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.21□□□□□ -0.94
VPS13A-204ENST00000376634 TP73-AS1Q9UF72 201 aa9.2□□□□□ -0.94
VPS13A-204ENST00000376634 Q8NA96 180 aa9.2□□□□□ -0.94
VPS13A-204ENST00000376634 LINC00526Q96FQ7 95 aa9.2□□□□□ -0.94
VPS13A-204ENST00000376634 POM121L12Q8N7R1 296 aa9.2□□□□□ -0.94
VPS13A-204ENST00000376634 EBI3Q14213 229 aa9.2□□□□□ -0.94
VPS13A-204ENST00000376634 C11orf1Q9H5F2 150 aa9.2□□□□□ -0.94
VPS13A-204ENST00000376634 PRORYQ9H606 182 aa9.2□□□□□ -0.94
VPS13A-204ENST00000376634 MAST4O15021 2626 aa9.2□□□□□ -0.94
VPS13A-204ENST00000376634 NRACQ8N912 160 aa9.19□□□□□ -0.94
VPS13A-204ENST00000376634 Q6Q795 121 aa9.19□□□□□ -0.94
VPS13A-204ENST00000376634 MAPKAPK5-AS1Q8N8E1 139 aa9.19□□□□□ -0.94
VPS13A-204ENST00000376634 RNF185Q96GF1 192 aa9.19□□□□□ -0.94
VPS13A-204ENST00000376634 CR1P17927 2039 aa9.19□□□□□ -0.94
VPS13A-204ENST00000376634 CELA1Q9UNI1 258 aa9.19□□□□□ -0.94
VPS13A-204ENST00000376634 PROK1P58294 105 aa9.19□□□□□ -0.94
VPS13A-204ENST00000376634 FSTL3O95633 263 aa9.18□□□□□ -0.94
VPS13A-204ENST00000376634 REG3GQ6UW15 175 aa9.18□□□□□ -0.94
VPS13A-204ENST00000376634 PSPHP1O15172 72 aa9.18□□□□□ -0.94
VPS13A-204ENST00000376634 ATRQ13535 2644 aa9.18□□□□□ -0.94
VPS13A-204ENST00000376634 NUPR2A6NF83 97 aa9.18□□□□□ -0.94
VPS13A-204ENST00000376634 ZNF843Q8N446 348 aa9.18□□□□□ -0.94
VPS13A-204ENST00000376634 Q8IZM0 81 aa9.17□□□□□ -0.94
VPS13A-204ENST00000376634 M0QXV9 152 aa9.17□□□□□ -0.94
VPS13A-204ENST00000376634 NANOS2P60321 138 aaKnown RBP9.17□□□□□ -0.94
VPS13A-204ENST00000376634 Q6ZSV7 163 aa9.16□□□□□ -0.94
VPS13A-204ENST00000376634 SOSTDC1Q6X4U4 206 aa9.16□□□□□ -0.94
VPS13A-204ENST00000376634 LINC00959A0A1B0GUT2 108 aa9.16□□□□□ -0.94
VPS13A-204ENST00000376634 MSMPQ1L6U9 139 aa9.15□□□□□ -0.94
VPS13A-204ENST00000376634 IGHV6-1A0A0B4J1U7 121 aa9.15□□□□□ -0.94
VPS13A-204ENST00000376634 LY6G6DO95868 133 aa9.15□□□□□ -0.95
VPS13A-204ENST00000376634 CRIP1P50238 77 aa9.15□□□□□ -0.95
VPS13A-204ENST00000376634 A8MZ25 164 aa9.15□□□□□ -0.95
VPS13A-204ENST00000376634 PSMG3-AS1Q96PY0 264 aa9.14□□□□□ -0.95
VPS13A-204ENST00000376634 A0A1W2PNU3 283 aaPredicted RBP9.14□□□□□ -0.95
VPS13A-204ENST00000376634 XGP55808 180 aa9.14□□□□□ -0.95
VPS13A-204ENST00000376634 C2orf91Q6ZV80 131 aa9.14□□□□□ -0.95
VPS13A-204ENST00000376634 MBD6Q96DN6 1003 aa9.14□□□□□ -0.95
VPS13A-204ENST00000376634 IGLV2-11P01706 119 aa9.13□□□□□ -0.95
VPS13A-204ENST00000376634 IGLV5-52A0A0A0MRZ9 124 aa9.13□□□□□ -0.95
VPS13A-204ENST00000376634 C1orf137Q5JT78 98 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms