RNA–Protein interactions for RNA: ENST00000375639.6

C6orf48-204, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-204ENST00000375639 LINC00242Q5T6M2 205 aa11.7□□□□□ -0.54
C6orf48-204ENST00000375639 HSPB8Q9UJY1 196 aa11.7□□□□□ -0.54
C6orf48-204ENST00000375639 C5orf38Q86SI9 138 aa11.69□□□□□ -0.54
C6orf48-204ENST00000375639 A0A0J9YXV3 536 aa11.68□□□□□ -0.54
C6orf48-204ENST00000375639 USP17L23D6RBM5 183 aa11.68□□□□□ -0.54
C6orf48-204ENST00000375639 COX7A2LO14548 114 aa11.68□□□□□ -0.54
C6orf48-204ENST00000375639 S100A6P06703 90 aa11.68□□□□□ -0.54
C6orf48-204ENST00000375639 COX6A2Q02221 97 aa11.68□□□□□ -0.54
C6orf48-204ENST00000375639 GEMIN7Q9H840 131 aaKnown RBP11.68□□□□□ -0.54
C6orf48-204ENST00000375639 ABCA13Q86UQ4 5058 aa11.68□□□□□ -0.54
C6orf48-204ENST00000375639 DNAH2Q9P225 4427 aa11.68□□□□□ -0.54
C6orf48-204ENST00000375639 MALP21145 153 aa11.67□□□□□ -0.54
C6orf48-204ENST00000375639 SEC11AP67812 179 aa11.67□□□□□ -0.54
C6orf48-204ENST00000375639 IGHV3OR16-9A0A0B4J2B5 98 aa11.66□□□□□ -0.54
C6orf48-204ENST00000375639 H0Y8G0 127 aa11.66□□□□□ -0.54
C6orf48-204ENST00000375639 CFAP161Q6P656 301 aa11.66□□□□□ -0.54
C6orf48-204ENST00000375639 FAM19A3Q7Z5A8 133 aa11.66□□□□□ -0.54
C6orf48-204ENST00000375639 HERVK_113P63121 156 aa11.65□□□□□ -0.54
C6orf48-204ENST00000375639 C14orf177Q52M58 125 aa11.65□□□□□ -0.54
C6orf48-204ENST00000375639 Q8N814 137 aa11.65□□□□□ -0.54
C6orf48-204ENST00000375639 TINCRA0A1B0GVN0 87 aa11.64□□□□□ -0.55
C6orf48-204ENST00000375639 CHTOPQ9Y3Y2 248 aaKnown RBP11.64□□□□□ -0.55
C6orf48-204ENST00000375639 DNAH17Q9UFH2 4485 aa11.64□□□□□ -0.55
C6orf48-204ENST00000375639 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.63□□□□□ -0.55
C6orf48-204ENST00000375639 TRAV12-1A0A0B4J245 112 aa11.63□□□□□ -0.55
C6orf48-204ENST00000375639 IGHV1-58A0A0C4DH39 117 aa11.63□□□□□ -0.55
C6orf48-204ENST00000375639 C15orf56Q8N910 161 aa11.63□□□□□ -0.55
C6orf48-204ENST00000375639 PACRGQ96M98 296 aaPredicted RBP11.63□□□□□ -0.55
C6orf48-204ENST00000375639 MAP1LC3CQ9BXW4 147 aa11.63□□□□□ -0.55
C6orf48-204ENST00000375639 A0A087WZ39 114 aa11.62□□□□□ -0.55
C6orf48-204ENST00000375639 A0A1B0GVY2 172 aa11.62□□□□□ -0.55
C6orf48-204ENST00000375639 APOMO95445 188 aa11.62□□□□□ -0.55
C6orf48-204ENST00000375639 IGLC3P0DOY3 106 aa11.62□□□□□ -0.55
C6orf48-204ENST00000375639 HIGD2BQ4VC39 106 aa11.62□□□□□ -0.55
C6orf48-204ENST00000375639 SPATA12Q7Z6I5 190 aa11.62□□□□□ -0.55
C6orf48-204ENST00000375639 LINC00469Q8N7U9 141 aa11.62□□□□□ -0.55
C6orf48-204ENST00000375639 CHAC1Q9BUX1 264 aa11.62□□□□□ -0.55
C6orf48-204ENST00000375639 CDKN2A-AS1Q9UH64 79 aa11.62□□□□□ -0.55
C6orf48-204ENST00000375639 IGLV4-69A0A075B6H9 119 aa11.61□□□□□ -0.55
C6orf48-204ENST00000375639 hDV102S1A0JD36 115 aa11.61□□□□□ -0.55
C6orf48-204ENST00000375639 S100A2P29034 98 aa11.61□□□□□ -0.55
C6orf48-204ENST00000375639 SNRPEP62304 92 aaKnown RBP11.61□□□□□ -0.55
C6orf48-204ENST00000375639 HIST3H2BBQ8N257 126 aa11.61□□□□□ -0.55
C6orf48-204ENST00000375639 FUSP35637 526 aaKnown RBP eCLIP11.6□□□□□ -0.55
C6orf48-204ENST00000375639 KRTAP10-2P60368 255 aa11.6□□□□□ -0.55
C6orf48-204ENST00000375639 MRPL35Q9NZE8 188 aaKnown RBP11.6□□□□□ -0.55
C6orf48-204ENST00000375639 F8VRH5 84 aa11.59□□□□□ -0.55
C6orf48-204ENST00000375639 ODF1Q14990 250 aa11.59□□□□□ -0.55
C6orf48-204ENST00000375639 IGHV3-64A0A075B6Q5 118 aa11.58□□□□□ -0.56
C6orf48-204ENST00000375639 IGLV5-45A0A087WSX0 123 aa11.58□□□□□ -0.56
C6orf48-204ENST00000375639 GVQW2A0A096LPI5 108 aaPredicted RBP11.58□□□□□ -0.56
C6orf48-204ENST00000375639 C11orf86A6NJI1 115 aa11.58□□□□□ -0.56
C6orf48-204ENST00000375639 SYS1-DBNDD2H3BUS1 97 aa11.58□□□□□ -0.56
C6orf48-204ENST00000375639 ZNF561-AS1K7EIQ3 104 aa11.58□□□□□ -0.56
C6orf48-204ENST00000375639 LINC01561Q8N1V8 128 aa11.58□□□□□ -0.56
C6orf48-204ENST00000375639 ORAOV1Q8WV07 137 aa11.58□□□□□ -0.56
C6orf48-204ENST00000375639 LINC00526Q96FQ7 95 aa11.58□□□□□ -0.56
C6orf48-204ENST00000375639 H3BRM9 83 aa11.57□□□□□ -0.56
C6orf48-204ENST00000375639 NTN5Q8WTR8 489 aaPredicted RBP11.57□□□□□ -0.56
C6orf48-204ENST00000375639 PGPEP1Q9NXJ5 209 aa11.57□□□□□ -0.56
C6orf48-204ENST00000375639 TMA7Q9Y2S6 64 aaKnown RBP11.57□□□□□ -0.56
C6orf48-204ENST00000375639 IGLV5-52A0A0A0MRZ9 124 aa11.56□□□□□ -0.56
C6orf48-204ENST00000375639 C5orf52A6NGY3 159 aa11.56□□□□□ -0.56
C6orf48-204ENST00000375639 C3orf79P0CE67 100 aa11.56□□□□□ -0.56
C6orf48-204ENST00000375639 ZNF22P17026 224 aaPredicted RBP11.56□□□□□ -0.56
C6orf48-204ENST00000375639 KRTDAPP60985 99 aa11.56□□□□□ -0.56
C6orf48-204ENST00000375639 SPAG11BQ08648 103 aa11.56□□□□□ -0.56
C6orf48-204ENST00000375639 TMEM170BQ5T4T1 132 aa11.56□□□□□ -0.56
C6orf48-204ENST00000375639 OR10D4PQ8NGN7 298 aa11.56□□□□□ -0.56
C6orf48-204ENST00000375639 HIST1H2BLQ99880 126 aa11.56□□□□□ -0.56
C6orf48-204ENST00000375639 PMCHL2Q9BQD1 86 aa11.56□□□□□ -0.56
C6orf48-204ENST00000375639 FAT2Q9NYQ8 4349 aa11.56□□□□□ -0.56
C6orf48-204ENST00000375639 SPINK8P0C7L1 97 aa11.55□□□□□ -0.56
C6orf48-204ENST00000375639 PET117Q6UWS5 81 aa11.54□□□□□ -0.56
C6orf48-204ENST00000375639 TOMM7Q9P0U1 55 aa11.54□□□□□ -0.56
C6orf48-204ENST00000375639 SMIM1B2RUZ4 78 aa11.53□□□□□ -0.56
C6orf48-204ENST00000375639 DPM2O94777 84 aa11.53□□□□□ -0.56
C6orf48-204ENST00000375639 SLPIP03973 132 aa11.53□□□□□ -0.56
C6orf48-204ENST00000375639 CDPF1Q6NVV7 123 aa11.53□□□□□ -0.56
C6orf48-204ENST00000375639 PRSS2P07478 247 aa11.52□□□□□ -0.57
C6orf48-204ENST00000375639 PLNP26678 52 aa11.52□□□□□ -0.57
C6orf48-204ENST00000375639 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.51□□□□□ -0.57
C6orf48-204ENST00000375639 C16orf90A8MZG2 172 aa11.51□□□□□ -0.57
C6orf48-204ENST00000375639 IGKCP01834 107 aa11.51□□□□□ -0.57
C6orf48-204ENST00000375639 CNBPP62633 177 aaKnown RBP11.51□□□□□ -0.57
C6orf48-204ENST00000375639 CAMK2N2Q96S95 79 aa11.51□□□□□ -0.57
C6orf48-204ENST00000375639 SYCNQ0VAF6 134 aa11.5□□□□□ -0.57
C6orf48-204ENST00000375639 KIAA0087Q14695 138 aa11.5□□□□□ -0.57
C6orf48-204ENST00000375639 C6orf226Q5I0X4 101 aa11.5□□□□□ -0.57
C6orf48-204ENST00000375639 LINC01545Q5VT33 79 aa11.5□□□□□ -0.57
C6orf48-204ENST00000375639 C2orf48Q96LS8 159 aa11.5□□□□□ -0.57
C6orf48-204ENST00000375639 LINC01620Q4KN68 170 aa11.49□□□□□ -0.57
C6orf48-204ENST00000375639 Q8IZM0 81 aa11.49□□□□□ -0.57
C6orf48-204ENST00000375639 TMEM223A0PJW6 202 aa11.48□□□□□ -0.57
C6orf48-204ENST00000375639 C20orf202A1L168 122 aa11.48□□□□□ -0.57
C6orf48-204ENST00000375639 GCSHP23434 173 aa11.48□□□□□ -0.57
C6orf48-204ENST00000375639 COX7B2Q8TF08 81 aa11.48□□□□□ -0.57
C6orf48-204ENST00000375639 CARD19Q96LW7 228 aa11.48□□□□□ -0.57
C6orf48-204ENST00000375639 F8WDY8 70 aa11.47□□□□□ -0.57
C6orf48-204ENST00000375639 NDUFA1O15239 70 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms