RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 M0QY20 66 aa8.86□□□□□ -0.99
C9orf3-203ENST00000375315 COPS9Q8WXC6 57 aa8.86□□□□□ -0.99
C9orf3-203ENST00000375315 MALP21145 153 aa8.85□□□□□ -0.99
C9orf3-203ENST00000375315 IGKV3D-7A0A0C4DH55 119 aa8.85□□□□□ -0.99
C9orf3-203ENST00000375315 DNAJC9-AS1A6NH13 148 aa8.85□□□□□ -0.99
C9orf3-203ENST00000375315 BEAN1Q3B7T3 259 aa8.85□□□□□ -0.99
C9orf3-203ENST00000375315 PRO0628Q9UI54 55 aa8.85□□□□□ -0.99
C9orf3-203ENST00000375315 MUC4Q99102 2169 aa8.85□□□□□ -0.99
C9orf3-203ENST00000375315 USP17L23D6RBM5 183 aa8.85□□□□□ -0.99
C9orf3-203ENST00000375315 RS1O15537 224 aa8.85□□□□□ -0.99
C9orf3-203ENST00000375315 NDUFC2-KCTD14E9PQ53 114 aa8.84□□□□□ -0.99
C9orf3-203ENST00000375315 LY6G6DO95868 133 aa8.84□□□□□ -0.99
C9orf3-203ENST00000375315 KRTAP1-1Q07627 177 aa8.84□□□□□ -0.99
C9orf3-203ENST00000375315 ZNF702PQ9H963 129 aa8.84□□□□□ -0.99
C9orf3-203ENST00000375315 NSD1Q96L73 2696 aaPredicted RBP8.84□□□□□ -0.99
C9orf3-203ENST00000375315 TINCRA0A1B0GVN0 87 aa8.84□□□□□ -0.99
C9orf3-203ENST00000375315 A8MZ25 164 aa8.84□□□□□ -0.99
C9orf3-203ENST00000375315 PRIMA1Q86XR5 153 aa8.84□□□□□ -0.99
C9orf3-203ENST00000375315 INAFM1C9JVW0 142 aa8.83□□□□□ -1
C9orf3-203ENST00000375315 LINC00308Q8TCZ7 52 aa8.83□□□□□ -1
C9orf3-203ENST00000375315 NDUFC2O95298 119 aa8.83□□□□□ -1
C9orf3-203ENST00000375315 FSHBP01225 129 aa8.83□□□□□ -1
C9orf3-203ENST00000375315 PFN2P35080 140 aa8.83□□□□□ -1
C9orf3-203ENST00000375315 ZNF415Q09FC8 603 aa8.83□□□□□ -1
C9orf3-203ENST00000375315 FAM223BA6NKX1 122 aa8.82□□□□□ -1
C9orf3-203ENST00000375315 F6UB75 175 aa8.82□□□□□ -1
C9orf3-203ENST00000375315 KLK9Q2XQG4 91 aa8.82□□□□□ -1
C9orf3-203ENST00000375315 FAM223AQ8IWN6 122 aa8.82□□□□□ -1
C9orf3-203ENST00000375315 KLK9Q9UKQ9 250 aa8.82□□□□□ -1
C9orf3-203ENST00000375315 C22orf24Q9Y442 160 aa8.82□□□□□ -1
C9orf3-203ENST00000375315 NACAE9PAV3 2078 aa8.82□□□□□ -1
C9orf3-203ENST00000375315 NDUFA1O15239 70 aa8.82□□□□□ -1
C9orf3-203ENST00000375315 A0A087WVE0 104 aa8.81□□□□□ -1
C9orf3-203ENST00000375315 IGKV3-20P01619 116 aa8.81□□□□□ -1
C9orf3-203ENST00000375315 SLURP1P55000 103 aa8.81□□□□□ -1
C9orf3-203ENST00000375315 C19orf54Q5BKX5 351 aa8.81□□□□□ -1
C9orf3-203ENST00000375315 F8WDY8 70 aa8.8□□□□□ -1
C9orf3-203ENST00000375315 SOCS3O14543 225 aa8.8□□□□□ -1
C9orf3-203ENST00000375315 RHPN1-AS1Q9BWJ2 59 aa8.8□□□□□ -1
C9orf3-203ENST00000375315 IGLV1-40P01703 118 aa8.8□□□□□ -1
C9orf3-203ENST00000375315 PSMB8P28062 276 aa8.8□□□□□ -1
C9orf3-203ENST00000375315 C1orf43Q9BWL3 253 aa8.8□□□□□ -1
C9orf3-203ENST00000375315 KLLNB2CW77 178 aa8.8□□□□□ -1
C9orf3-203ENST00000375315 RNASE13Q5GAN3 156 aaKnown RBP8.8□□□□□ -1
C9orf3-203ENST00000375315 LINC01561Q8N1V8 128 aa8.8□□□□□ -1
C9orf3-203ENST00000375315 Q8N2B8 174 aa8.8□□□□□ -1
C9orf3-203ENST00000375315 USMG5Q96IX5 58 aa8.8□□□□□ -1
C9orf3-203ENST00000375315 OVOL2Q9BRP0 275 aa8.79□□□□□ -1
C9orf3-203ENST00000375315 FHL2Q14192 279 aa8.79□□□□□ -1
C9orf3-203ENST00000375315 FAM218AQ96MZ4 157 aa8.79□□□□□ -1
C9orf3-203ENST00000375315 C9orf85Q96MD7 179 aa8.78□□□□□ -1
C9orf3-203ENST00000375315 Q9HAA7 133 aa8.78□□□□□ -1
C9orf3-203ENST00000375315 TMEM243Q9BU79 118 aa8.78□□□□□ -1
C9orf3-203ENST00000375315 LINC00846Q9NV44 126 aa8.78□□□□□ -1
C9orf3-203ENST00000375315 MAST4O15021 2626 aa8.78□□□□□ -1
C9orf3-203ENST00000375315 C14orf132Q9NPU4 83 aa8.78□□□□□ -1
C9orf3-203ENST00000375315 FAM236DA0A1B0GTK5 79 aa8.77□□□□□ -1.01
C9orf3-203ENST00000375315 FAM236CP0DP71 79 aa8.77□□□□□ -1.01
C9orf3-203ENST00000375315 FAM104AQ969W3 186 aa8.77□□□□□ -1.01
C9orf3-203ENST00000375315 IGHV3-16A0A0C4DH30 117 aa8.77□□□□□ -1.01
C9orf3-203ENST00000375315 A0A0U1RRA0 63 aa8.77□□□□□ -1.01
C9orf3-203ENST00000375315 HOXD3P31249 432 aaPredicted RBP8.77□□□□□ -1.01
C9orf3-203ENST00000375315 CFHR3Q02985 330 aa8.77□□□□□ -1.01
C9orf3-203ENST00000375315 Q9H8V8 135 aa8.77□□□□□ -1.01
C9orf3-203ENST00000375315 TENM1Q9UKZ4 2725 aa8.76□□□□□ -1.01
C9orf3-203ENST00000375315 TRAV12-2A0A075B6T6 113 aa8.76□□□□□ -1.01
C9orf3-203ENST00000375315 LINC00336Q6ZUF6 198 aa8.76□□□□□ -1.01
C9orf3-203ENST00000375315 UBE2D4Q9Y2X8 147 aa8.76□□□□□ -1.01
C9orf3-203ENST00000375315 SERP1Q9Y6X1 66 aa8.76□□□□□ -1.01
C9orf3-203ENST00000375315 RBMY1BA6NDE4 496 aaKnown RBP8.76□□□□□ -1.01
C9orf3-203ENST00000375315 RBMY1EA6NEQ0 496 aaKnown RBP8.76□□□□□ -1.01
C9orf3-203ENST00000375315 RBMY1DP0C7P1 496 aaKnown RBP8.76□□□□□ -1.01
C9orf3-203ENST00000375315 RBMY1A1P0DJD3 496 aaKnown RBP8.76□□□□□ -1.01
C9orf3-203ENST00000375315 RBMY1CP0DJD4 496 aa8.76□□□□□ -1.01
C9orf3-203ENST00000375315 RBMY1FQ15415 496 aaKnown RBP8.76□□□□□ -1.01
C9orf3-203ENST00000375315 NDUFA4O00483 81 aa8.75□□□□□ -1.01
C9orf3-203ENST00000375315 GHRHP01286 108 aa8.75□□□□□ -1.01
C9orf3-203ENST00000375315 ZNF625Q96I27 306 aaPredicted RBP8.75□□□□□ -1.01
C9orf3-203ENST00000375315 CDKN2A-AS1Q9UH64 79 aa8.75□□□□□ -1.01
C9orf3-203ENST00000375315 PF4P02776 101 aa8.74□□□□□ -1.01
C9orf3-203ENST00000375315 SOSTDC1Q6X4U4 206 aa8.74□□□□□ -1.01
C9orf3-203ENST00000375315 TRAV13-2A0A0B4J235 113 aa8.74□□□□□ -1.01
C9orf3-203ENST00000375315 S100A7L2Q5SY68 101 aa8.74□□□□□ -1.01
C9orf3-203ENST00000375315 RPL28P46779 137 aaKnown RBP8.73□□□□□ -1.01
C9orf3-203ENST00000375315 LINC01006Q8NI28 216 aa8.73□□□□□ -1.01
C9orf3-203ENST00000375315 ANK3Q12955 4377 aaKnown RBP8.73□□□□□ -1.01
C9orf3-203ENST00000375315 VWFP04275 2813 aa8.72□□□□□ -1.01
C9orf3-203ENST00000375315 CYSRT1A8MQ03 144 aa8.72□□□□□ -1.01
C9orf3-203ENST00000375315 H3BUA1 57 aa8.72□□□□□ -1.01
C9orf3-203ENST00000375315 RPL35AP18077 110 aaKnown RBP8.72□□□□□ -1.01
C9orf3-203ENST00000375315 C20orf197Q8N268 126 aa8.72□□□□□ -1.01
C9orf3-203ENST00000375315 CRPP02741 224 aa8.72□□□□□ -1.01
C9orf3-203ENST00000375315 IGLV5-45A0A087WSX0 123 aa8.71□□□□□ -1.01
C9orf3-203ENST00000375315 ATP5EP2Q5VTU8 51 aa8.71□□□□□ -1.01
C9orf3-203ENST00000375315 OBSCN-AS1Q96MR7 158 aa8.71□□□□□ -1.01
C9orf3-203ENST00000375315 PKIGQ9Y2B9 76 aa8.71□□□□□ -1.01
C9orf3-203ENST00000375315 STAB1Q9NY15 2570 aa8.71□□□□□ -1.01
C9orf3-203ENST00000375315 EPM2AB3EWF7 344 aa8.71□□□□□ -1.01
C9orf3-203ENST00000375315 HTN1P15515 57 aa8.71□□□□□ -1.01
C9orf3-203ENST00000375315 UBE2E2Q96LR5 201 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms