RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 CHCHD1Q96BP2 118 aaKnown RBP9.38□□□□□ -0.91
CDKN1A-202ENST00000373711 PLAC8Q9NZF1 115 aa9.38□□□□□ -0.91
CDKN1A-202ENST00000373711 TRBV25-1A0A075B6N4 114 aa9.37□□□□□ -0.91
CDKN1A-202ENST00000373711 A0A096LNJ9 63 aa9.37□□□□□ -0.91
CDKN1A-202ENST00000373711 IGHV1-24A0A0C4DH33 117 aa9.37□□□□□ -0.91
CDKN1A-202ENST00000373711 K7EMI3 77 aa9.37□□□□□ -0.91
CDKN1A-202ENST00000373711 PMCHL1Q16048 86 aa9.37□□□□□ -0.91
CDKN1A-202ENST00000373711 CLPSL2Q6UWE3 100 aa9.37□□□□□ -0.91
CDKN1A-202ENST00000373711 LINC00269Q8N2A0 174 aa9.37□□□□□ -0.91
CDKN1A-202ENST00000373711 TMA7Q9Y2S6 64 aaKnown RBP9.37□□□□□ -0.91
CDKN1A-202ENST00000373711 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.36□□□□□ -0.91
CDKN1A-202ENST00000373711 TRAV8-4A0A0B4J246 113 aa9.36□□□□□ -0.91
CDKN1A-202ENST00000373711 IGKV2-29A2NJV5 120 aaPredicted RBP9.36□□□□□ -0.91
CDKN1A-202ENST00000373711 CHTF8P0CG12 524 aa9.36□□□□□ -0.91
CDKN1A-202ENST00000373711 RPL39P62891 51 aaKnown RBP9.36□□□□□ -0.91
CDKN1A-202ENST00000373711 ORMDL2Q53FV1 153 aa9.36□□□□□ -0.91
CDKN1A-202ENST00000373711 FAM19A2Q8N3H0 131 aa9.36□□□□□ -0.91
CDKN1A-202ENST00000373711 C20orf203Q8NBC4 194 aa9.36□□□□□ -0.91
CDKN1A-202ENST00000373711 TMEM243Q9BU79 118 aa9.36□□□□□ -0.91
CDKN1A-202ENST00000373711 HSBP1O75506 76 aa9.35□□□□□ -0.91
CDKN1A-202ENST00000373711 RBX1P62877 108 aa9.35□□□□□ -0.91
CDKN1A-202ENST00000373711 PRR3P79522 188 aaKnown RBP9.35□□□□□ -0.91
CDKN1A-202ENST00000373711 KRTAP26-1Q6PEX3 210 aa9.35□□□□□ -0.91
CDKN1A-202ENST00000373711 GAGE6Q13070 117 aa9.34□□□□□ -0.91
CDKN1A-202ENST00000373711 SPINK6Q6UWN8 80 aa9.34□□□□□ -0.91
CDKN1A-202ENST00000373711 C2orf66Q6UXQ4 117 aa9.34□□□□□ -0.91
CDKN1A-202ENST00000373711 S100A6P06703 90 aa9.33□□□□□ -0.92
CDKN1A-202ENST00000373711 KRTAP10-8P60410 259 aa9.33□□□□□ -0.92
CDKN1A-202ENST00000373711 SNRPEP62304 92 aaKnown RBP9.33□□□□□ -0.92
CDKN1A-202ENST00000373711 REG3AQ06141 175 aa9.33□□□□□ -0.92
CDKN1A-202ENST00000373711 TOMM6Q96B49 74 aa9.33□□□□□ -0.92
CDKN1A-202ENST00000373711 IGLV10-54A0A075B6I4 117 aa9.32□□□□□ -0.92
CDKN1A-202ENST00000373711 C5orf52A6NGY3 159 aa9.32□□□□□ -0.92
CDKN1A-202ENST00000373711 HBDP02042 147 aa9.32□□□□□ -0.92
CDKN1A-202ENST00000373711 PDZD11Q5EBL8 140 aa9.32□□□□□ -0.92
CDKN1A-202ENST00000373711 H7C423 109 aa9.31□□□□□ -0.92
CDKN1A-202ENST00000373711 UBE2L6O14933 153 aa9.31□□□□□ -0.92
CDKN1A-202ENST00000373711 FGF6P10767 208 aa9.31□□□□□ -0.92
CDKN1A-202ENST00000373711 ODF1Q14990 250 aa9.31□□□□□ -0.92
CDKN1A-202ENST00000373711 MAJINQ3KP22 176 aa9.31□□□□□ -0.92
CDKN1A-202ENST00000373711 CFAP161Q6P656 301 aa9.31□□□□□ -0.92
CDKN1A-202ENST00000373711 LINC00173Q6ZV60 143 aa9.31□□□□□ -0.92
CDKN1A-202ENST00000373711 FAM104AQ969W3 186 aa9.31□□□□□ -0.92
CDKN1A-202ENST00000373711 TMEM18Q96B42 140 aa9.31□□□□□ -0.92
CDKN1A-202ENST00000373711 CYSLTR1Q9Y271 337 aa9.31□□□□□ -0.92
CDKN1A-202ENST00000373711 PKIGQ9Y2B9 76 aa9.31□□□□□ -0.92
CDKN1A-202ENST00000373711 UBE2D4Q9Y2X8 147 aa9.31□□□□□ -0.92
CDKN1A-202ENST00000373711 G0S2P27469 103 aa9.3□□□□□ -0.92
CDKN1A-202ENST00000373711 HIST3H2BBQ8N257 126 aa9.3□□□□□ -0.92
CDKN1A-202ENST00000373711 OPRPNQ99935 248 aaPredicted RBP9.3□□□□□ -0.92
CDKN1A-202ENST00000373711 IGLV4-60A0A075B6I1 120 aa9.29□□□□□ -0.92
CDKN1A-202ENST00000373711 IGIPA6NJ69 53 aa9.29□□□□□ -0.92
CDKN1A-202ENST00000373711 COX6A2Q02221 97 aa9.29□□□□□ -0.92
CDKN1A-202ENST00000373711 MRPL52Q86TS9 123 aaKnown RBP9.29□□□□□ -0.92
CDKN1A-202ENST00000373711 TIMM21Q9BVV7 248 aa9.29□□□□□ -0.92
CDKN1A-202ENST00000373711 A0A0U1RQV1 116 aa9.28□□□□□ -0.92
CDKN1A-202ENST00000373711 IFITM10A6NMD0 228 aa9.28□□□□□ -0.92
CDKN1A-202ENST00000373711 FABP4P15090 132 aa9.28□□□□□ -0.92
CDKN1A-202ENST00000373711 AMMECR1LQ6DCA0 310 aa9.28□□□□□ -0.92
CDKN1A-202ENST00000373711 ERASQ7Z444 233 aa9.28□□□□□ -0.92
CDKN1A-202ENST00000373711 STPG4Q8N801 248 aa9.28□□□□□ -0.92
CDKN1A-202ENST00000373711 SCGB3A1Q96QR1 104 aa9.28□□□□□ -0.92
CDKN1A-202ENST00000373711 LINC00474Q9P2X8 69 aa9.28□□□□□ -0.92
CDKN1A-202ENST00000373711 PYGO1Q9Y3Y4 419 aa9.28□□□□□ -0.92
CDKN1A-202ENST00000373711 IGKV2-24A0A0C4DH68 120 aa9.27□□□□□ -0.93
CDKN1A-202ENST00000373711 A0A1B0GUV1 79 aa9.27□□□□□ -0.93
CDKN1A-202ENST00000373711 SLPIP03973 132 aa9.27□□□□□ -0.93
CDKN1A-202ENST00000373711 ZC2HC1BQ5TFG8 222 aa9.27□□□□□ -0.93
CDKN1A-202ENST00000373711 CDC42SE2Q9NRR3 84 aa9.27□□□□□ -0.93
CDKN1A-202ENST00000373711 SPANXA1Q9NS26 97 aa9.27□□□□□ -0.93
CDKN1A-202ENST00000373711 CSDC2Q9Y534 153 aaKnown RBP9.27□□□□□ -0.93
CDKN1A-202ENST00000373711 IGLV4-3A0A075B6K6 122 aa9.26□□□□□ -0.93
CDKN1A-202ENST00000373711 LINC01549A6NIU2 74 aa9.26□□□□□ -0.93
CDKN1A-202ENST00000373711 LEPROTL1O95214 131 aa9.26□□□□□ -0.93
CDKN1A-202ENST00000373711 RNASE13Q5GAN3 156 aaKnown RBP9.26□□□□□ -0.93
CDKN1A-202ENST00000373711 Q6ZUT4 128 aa9.26□□□□□ -0.93
CDKN1A-202ENST00000373711 TIMM17AQ99595 171 aa9.26□□□□□ -0.93
CDKN1A-202ENST00000373711 ZNF25P17030 456 aaPredicted RBP9.25□□□□□ -0.93
CDKN1A-202ENST00000373711 Q6ZRP5 223 aa9.25□□□□□ -0.93
CDKN1A-202ENST00000373711 ZNF664Q8N3J9 261 aa9.25□□□□□ -0.93
CDKN1A-202ENST00000373711 OR5A1Q8NGJ0 315 aa9.25□□□□□ -0.93
CDKN1A-202ENST00000373711 IFI27L1Q96BM0 104 aa9.25□□□□□ -0.93
CDKN1A-202ENST00000373711 TMEM101Q96IK0 257 aa9.25□□□□□ -0.93
CDKN1A-202ENST00000373711 HIST1H2BLQ99880 126 aa9.25□□□□□ -0.93
CDKN1A-202ENST00000373711 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.24□□□□□ -0.93
CDKN1A-202ENST00000373711 ATP5LO75964 103 aa9.24□□□□□ -0.93
CDKN1A-202ENST00000373711 S100A2P29034 98 aa9.24□□□□□ -0.93
CDKN1A-202ENST00000373711 MRPS36P82909 103 aaKnown RBP9.24□□□□□ -0.93
CDKN1A-202ENST00000373711 SMAGPQ0VAQ4 97 aa9.24□□□□□ -0.93
CDKN1A-202ENST00000373711 TMEM141Q96I45 108 aa9.24□□□□□ -0.93
CDKN1A-202ENST00000373711 PACRGQ96M98 296 aaPredicted RBP9.24□□□□□ -0.93
CDKN1A-202ENST00000373711 AMELXQ99217 191 aa9.23□□□□□ -0.93
CDKN1A-202ENST00000373711 KRTAP9-2Q9BYQ4 174 aa9.23□□□□□ -0.93
CDKN1A-202ENST00000373711 HSPB8Q9UJY1 196 aa9.23□□□□□ -0.93
CDKN1A-202ENST00000373711 NPSP0C0P6 89 aa9.22□□□□□ -0.93
CDKN1A-202ENST00000373711 C15orf56Q8N910 161 aa9.22□□□□□ -0.93
CDKN1A-202ENST00000373711 LPAP08519 4548 aa9.22□□□□□ -0.93
CDKN1A-202ENST00000373711 SRSF9Q13242 221 aaKnown RBP eCLIP9.21□□□□□ -0.94
CDKN1A-202ENST00000373711 Q6ZN92 141 aa9.21□□□□□ -0.94
CDKN1A-202ENST00000373711 VCX2Q9H322 139 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms