RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 TEX49A0A1B0GTD5 131 aa7.6□□□□□ -1.19
NUP188-201ENST00000372577 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.6□□□□□ -1.19
NUP188-201ENST00000372577 NOTCH2Q04721 2471 aa7.6□□□□□ -1.19
NUP188-201ENST00000372577 TLN1Q9Y490 2541 aaKnown RBP7.6□□□□□ -1.19
NUP188-201ENST00000372577 IGLV2-18A0A075B6J9 118 aa7.59□□□□□ -1.19
NUP188-201ENST00000372577 ARHGAP32A7KAX9 2087 aa7.59□□□□□ -1.19
NUP188-201ENST00000372577 TRIOO75962 3097 aa7.59□□□□□ -1.19
NUP188-201ENST00000372577 IGLV4-69A0A075B6H9 119 aa7.59□□□□□ -1.19
NUP188-201ENST00000372577 LOC100131303A0A0U1RQF7 123 aa7.59□□□□□ -1.19
NUP188-201ENST00000372577 EDN2P20800 178 aa7.59□□□□□ -1.19
NUP188-201ENST00000372577 Q8N2B8 174 aa7.59□□□□□ -1.19
NUP188-201ENST00000372577 M0R378 163 aa7.59□□□□□ -1.19
NUP188-201ENST00000372577 TRAV23DV6A0A075B6W5 121 aa7.59□□□□□ -1.19
NUP188-201ENST00000372577 SEC61GP60059 68 aa7.59□□□□□ -1.19
NUP188-201ENST00000372577 LINC00242Q5T6M2 205 aa7.59□□□□□ -1.19
NUP188-201ENST00000372577 AMELXQ99217 191 aa7.59□□□□□ -1.19
NUP188-201ENST00000372577 C1orf158Q8N1D5 194 aa7.58□□□□□ -1.2
NUP188-201ENST00000372577 PTPN13Q12923 2485 aa7.58□□□□□ -1.2
NUP188-201ENST00000372577 PRB2P02812 416 aaPredicted RBP7.58□□□□□ -1.2
NUP188-201ENST00000372577 C6orf99Q4VX62 202 aa7.58□□□□□ -1.2
NUP188-201ENST00000372577 WNK1Q9H4A3 2382 aa7.57□□□□□ -1.2
NUP188-201ENST00000372577 A8MZ25 164 aa7.57□□□□□ -1.2
NUP188-201ENST00000372577 BPY2O14599 106 aa7.57□□□□□ -1.2
NUP188-201ENST00000372577 IMUPQ9GZP8 106 aa7.57□□□□□ -1.2
NUP188-201ENST00000372577 A0A096LNJ9 63 aa7.57□□□□□ -1.2
NUP188-201ENST00000372577 LINC01546A6NGU7 62 aa7.57□□□□□ -1.2
NUP188-201ENST00000372577 IGHV4-30-4P0DP06 118 aa7.57□□□□□ -1.2
NUP188-201ENST00000372577 PIEZO2Q9H5I5 2752 aa7.57□□□□□ -1.2
NUP188-201ENST00000372577 MRPL55Q7Z7F7 128 aaKnown RBP7.56□□□□□ -1.2
NUP188-201ENST00000372577 DHRS4-AS1Q9P1J3 65 aa7.56□□□□□ -1.2
NUP188-201ENST00000372577 UPK3BQ9BT76 320 aa7.56□□□□□ -1.2
NUP188-201ENST00000372577 IGKV2-24A0A0C4DH68 120 aa7.56□□□□□ -1.2
NUP188-201ENST00000372577 A0A087WZ39 114 aa7.56□□□□□ -1.2
NUP188-201ENST00000372577 SMIM1B2RUZ4 78 aa7.56□□□□□ -1.2
NUP188-201ENST00000372577 PRM2P04554 102 aa7.56□□□□□ -1.2
NUP188-201ENST00000372577 WFDC9Q8NEX5 89 aa7.55□□□□□ -1.2
NUP188-201ENST00000372577 NDUFV3P56181 108 aaKnown RBP7.55□□□□□ -1.2
NUP188-201ENST00000372577 POM121L12Q8N7R1 296 aa7.55□□□□□ -1.2
NUP188-201ENST00000372577 RNF183Q96D59 192 aa7.55□□□□□ -1.2
NUP188-201ENST00000372577 XAGE1AQ9HD64 81 aa7.55□□□□□ -1.2
NUP188-201ENST00000372577 LINC01561Q8N1V8 128 aa7.55□□□□□ -1.2
NUP188-201ENST00000372577 F8WDY8 70 aa7.54□□□□□ -1.2
NUP188-201ENST00000372577 J3KT08 172 aa7.54□□□□□ -1.2
NUP188-201ENST00000372577 MT-ATP8P03928 68 aa7.54□□□□□ -1.2
NUP188-201ENST00000372577 FHL2Q14192 279 aa7.54□□□□□ -1.2
NUP188-201ENST00000372577 FAM19A1Q7Z5A9 133 aa7.54□□□□□ -1.2
NUP188-201ENST00000372577 SMIM11BQ8TCY0 68 aa7.54□□□□□ -1.2
NUP188-201ENST00000372577 HIGD2AQ9BW72 106 aa7.54□□□□□ -1.2
NUP188-201ENST00000372577 LOC107984640A0A0U1RRK4 108 aa7.54□□□□□ -1.2
NUP188-201ENST00000372577 KLK9Q2XQG4 91 aa7.54□□□□□ -1.2
NUP188-201ENST00000372577 UQCRQO14949 82 aa7.53□□□□□ -1.2
NUP188-201ENST00000372577 DSCAML1Q8TD84 2053 aa7.53□□□□□ -1.2
NUP188-201ENST00000372577 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.53□□□□□ -1.2
NUP188-201ENST00000372577 A0A1B0GUV1 79 aa7.53□□□□□ -1.2
NUP188-201ENST00000372577 FAM19A4Q96LR4 140 aa7.53□□□□□ -1.2
NUP188-201ENST00000372577 KIF25-AS1Q9Y6Z4 181 aa7.53□□□□□ -1.2
NUP188-201ENST00000372577 SLPIP03973 132 aa7.52□□□□□ -1.2
NUP188-201ENST00000372577 EGFEM1PQ0D2K5 195 aa7.52□□□□□ -1.21
NUP188-201ENST00000372577 XIRP2A4UGR9 3374 aa7.52□□□□□ -1.21
NUP188-201ENST00000372577 REV3LO60673 3130 aa7.51□□□□□ -1.21
NUP188-201ENST00000372577 FAM240AA0A1B0GVK7 77 aa7.51□□□□□ -1.21
NUP188-201ENST00000372577 RPL28P46779 137 aaKnown RBP7.51□□□□□ -1.21
NUP188-201ENST00000372577 OXLD1Q5BKU9 147 aa7.51□□□□□ -1.21
NUP188-201ENST00000372577 CYSRT1A8MQ03 144 aa7.5□□□□□ -1.21
NUP188-201ENST00000372577 FAM19A5Q7Z5A7 132 aaPredicted RBP7.5□□□□□ -1.21
NUP188-201ENST00000372577 PRRC2AP48634 2157 aaKnown RBP7.5□□□□□ -1.21
NUP188-201ENST00000372577 LINC00474Q9P2X8 69 aa7.5□□□□□ -1.21
NUP188-201ENST00000372577 ZNF73O43830 326 aaPredicted RBP7.5□□□□□ -1.21
NUP188-201ENST00000372577 HIVEP3Q5T1R4 2406 aa7.5□□□□□ -1.21
NUP188-201ENST00000372577 Q6ZQY7 126 aa7.5□□□□□ -1.21
NUP188-201ENST00000372577 PCSK5Q92824 1860 aa7.5□□□□□ -1.21
NUP188-201ENST00000372577 A0A0J9YWU9 116 aa7.49□□□□□ -1.21
NUP188-201ENST00000372577 SDIM1Q6ZPB5 146 aa7.49□□□□□ -1.21
NUP188-201ENST00000372577 ZNF706Q9Y5V0 76 aaPredicted RBP7.49□□□□□ -1.21
NUP188-201ENST00000372577 CCDC168Q8NDH2 2452 aa7.49□□□□□ -1.21
NUP188-201ENST00000372577 H0Y9J4 135 aa7.49□□□□□ -1.21
NUP188-201ENST00000372577 TSPEAR-AS2P59090 65 aa7.49□□□□□ -1.21
NUP188-201ENST00000372577 SMR3AQ99954 134 aa7.49□□□□□ -1.21
NUP188-201ENST00000372577 LINC00694P0DN24 101 aa7.48□□□□□ -1.21
NUP188-201ENST00000372577 CCKP06307 115 aa7.48□□□□□ -1.21
NUP188-201ENST00000372577 COX6A2Q02221 97 aa7.48□□□□□ -1.21
NUP188-201ENST00000372577 TET2Q6N021 2002 aaPredicted RBP7.48□□□□□ -1.21
NUP188-201ENST00000372577 NANOS2P60321 138 aaKnown RBP7.48□□□□□ -1.21
NUP188-201ENST00000372577 K7ERS5 55 aa7.47□□□□□ -1.21
NUP188-201ENST00000372577 CHD7Q9P2D1 2997 aa7.47□□□□□ -1.21
NUP188-201ENST00000372577 IGLV4-60A0A075B6I1 120 aa7.47□□□□□ -1.21
NUP188-201ENST00000372577 C11orf72Q8NBR9 251 aa7.47□□□□□ -1.21
NUP188-201ENST00000372577 Q6Q795 121 aa7.47□□□□□ -1.21
NUP188-201ENST00000372577 M0QXV9 152 aa7.47□□□□□ -1.21
NUP188-201ENST00000372577 ENHOQ6UWT2 76 aa7.47□□□□□ -1.21
NUP188-201ENST00000372577 C3orf22Q8N5N4 141 aa7.47□□□□□ -1.21
NUP188-201ENST00000372577 CASC2Q6XLA1 102 aa7.46□□□□□ -1.21
NUP188-201ENST00000372577 Q6ZSN1 163 aa7.46□□□□□ -1.21
NUP188-201ENST00000372577 SONP18583 2426 aaKnown RBP7.46□□□□□ -1.21
NUP188-201ENST00000372577 Q6JHZ5 121 aa7.46□□□□□ -1.22
NUP188-201ENST00000372577 WDFY4Q6ZS81 3184 aa7.46□□□□□ -1.22
NUP188-201ENST00000372577 C7orf33Q8WU49 177 aa7.46□□□□□ -1.22
NUP188-201ENST00000372577 FHL3Q13643 280 aa7.45□□□□□ -1.22
NUP188-201ENST00000372577 C2orf48Q96LS8 159 aa7.45□□□□□ -1.22
NUP188-201ENST00000372577 NUPR2A6NF83 97 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms