RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 F8P00451 2351 aa10.68□□□□□ -0.7
NDC1-201ENST00000371429 IGKV2-28A0A075B6P5 120 aa10.68□□□□□ -0.7
NDC1-201ENST00000371429 A8MZ25 164 aa10.68□□□□□ -0.7
NDC1-201ENST00000371429 IGKV2D-28P01615 120 aa10.68□□□□□ -0.7
NDC1-201ENST00000371429 TAX1BP3O14907 124 aa10.68□□□□□ -0.7
NDC1-201ENST00000371429 ATG2AQ2TAZ0 1938 aa10.67□□□□□ -0.7
NDC1-201ENST00000371429 MRPS36P82909 103 aaKnown RBP10.67□□□□□ -0.7
NDC1-201ENST00000371429 LOC107984640A0A0U1RRK4 108 aa10.67□□□□□ -0.7
NDC1-201ENST00000371429 C6orf99Q4VX62 202 aa10.66□□□□□ -0.7
NDC1-201ENST00000371429 C14orf132Q9NPU4 83 aa10.66□□□□□ -0.7
NDC1-201ENST00000371429 CNFNQ9BYD5 112 aa10.65□□□□□ -0.7
NDC1-201ENST00000371429 ADAMTS20P59510 1910 aa10.65□□□□□ -0.7
NDC1-201ENST00000371429 GAS8-AS1O95177 125 aa10.65□□□□□ -0.7
NDC1-201ENST00000371429 CDC42SE2Q9NRR3 84 aa10.65□□□□□ -0.71
NDC1-201ENST00000371429 EXPH5Q8NEV8 1989 aa10.64□□□□□ -0.71
NDC1-201ENST00000371429 CHCHD7Q9BUK0 85 aa10.64□□□□□ -0.71
NDC1-201ENST00000371429 TRAV23DV6A0A075B6W5 121 aa10.63□□□□□ -0.71
NDC1-201ENST00000371429 MAPKAPK5-AS1Q8N8E1 139 aa10.63□□□□□ -0.71
NDC1-201ENST00000371429 M0R378 163 aa10.62□□□□□ -0.71
NDC1-201ENST00000371429 TCL1BO95988 128 aa10.62□□□□□ -0.71
NDC1-201ENST00000371429 UBE2D1P51668 147 aa10.62□□□□□ -0.71
NDC1-201ENST00000371429 CHKB-CPT1BH3BT56 60 aa10.62□□□□□ -0.71
NDC1-201ENST00000371429 LINC00474Q9P2X8 69 aa10.62□□□□□ -0.71
NDC1-201ENST00000371429 BPY2O14599 106 aa10.62□□□□□ -0.71
NDC1-201ENST00000371429 CPAMD8Q8IZJ3 1885 aa10.62□□□□□ -0.71
NDC1-201ENST00000371429 PTH2Q96A98 100 aa10.62□□□□□ -0.71
NDC1-201ENST00000371429 RNASE8Q8TDE3 154 aaKnown RBP10.61□□□□□ -0.71
NDC1-201ENST00000371429 PPDPFQ9H3Y8 114 aa10.61□□□□□ -0.71
NDC1-201ENST00000371429 SLPIP03973 132 aa10.61□□□□□ -0.71
NDC1-201ENST00000371429 EML5Q05BV3 1969 aa10.61□□□□□ -0.71
NDC1-201ENST00000371429 CYSRT1A8MQ03 144 aa10.61□□□□□ -0.71
NDC1-201ENST00000371429 FOXI1Q12951 378 aa10.6□□□□□ -0.71
NDC1-201ENST00000371429 FHL2Q14192 279 aa10.6□□□□□ -0.71
NDC1-201ENST00000371429 Q8IZM0 81 aa10.59□□□□□ -0.71
NDC1-201ENST00000371429 HECTD1Q9ULT8 2610 aa10.59□□□□□ -0.71
NDC1-201ENST00000371429 G3V4G9 280 aa10.59□□□□□ -0.71
NDC1-201ENST00000371429 TIMM17BO60830 172 aa10.59□□□□□ -0.71
NDC1-201ENST00000371429 RPL37AP8A6NKH3 93 aa10.59□□□□□ -0.71
NDC1-201ENST00000371429 ZNF706Q9Y5V0 76 aaPredicted RBP10.59□□□□□ -0.71
NDC1-201ENST00000371429 Q8N2B8 174 aa10.58□□□□□ -0.72
NDC1-201ENST00000371429 NHLRC4P0CG21 123 aaPredicted RBP10.58□□□□□ -0.72
NDC1-201ENST00000371429 LINC00242Q5T6M2 205 aa10.57□□□□□ -0.72
NDC1-201ENST00000371429 TP73-AS1Q9UF72 201 aa10.57□□□□□ -0.72
NDC1-201ENST00000371429 COX17Q14061 63 aa10.56□□□□□ -0.72
NDC1-201ENST00000371429 DHRS4-AS1Q9P1J3 65 aa10.56□□□□□ -0.72
NDC1-201ENST00000371429 ATOX1O00244 68 aa10.56□□□□□ -0.72
NDC1-201ENST00000371429 UNQ6190/PRO20217Q6UXQ8 127 aa10.56□□□□□ -0.72
NDC1-201ENST00000371429 FAM236AA0A1B0GUQ0 79 aa10.56□□□□□ -0.72
NDC1-201ENST00000371429 FAM236BA0A1B0GV22 79 aa10.56□□□□□ -0.72
NDC1-201ENST00000371429 Q6ZQY7 126 aa10.55□□□□□ -0.72
NDC1-201ENST00000371429 TRIAP1O43715 76 aa10.55□□□□□ -0.72
NDC1-201ENST00000371429 IGKV4-1P06312 121 aa10.55□□□□□ -0.72
NDC1-201ENST00000371429 YPEL4Q96NS1 127 aa10.55□□□□□ -0.72
NDC1-201ENST00000371429 PLAC8L1A1L4L8 177 aa10.55□□□□□ -0.72
NDC1-201ENST00000371429 IGIPA6NJ69 53 aa10.55□□□□□ -0.72
NDC1-201ENST00000371429 WFDC9Q8NEX5 89 aa10.55□□□□□ -0.72
NDC1-201ENST00000371429 MUC7Q8TAX7 377 aa10.54□□□□□ -0.72
NDC1-201ENST00000371429 IGLV4-60A0A075B6I1 120 aa10.54□□□□□ -0.72
NDC1-201ENST00000371429 EGFEM1PQ0D2K5 195 aa10.54□□□□□ -0.72
NDC1-201ENST00000371429 CCKP06307 115 aa10.54□□□□□ -0.72
NDC1-201ENST00000371429 BEAN1Q3B7T3 259 aa10.54□□□□□ -0.72
NDC1-201ENST00000371429 TET2Q6N021 2002 aaPredicted RBP10.53□□□□□ -0.72
NDC1-201ENST00000371429 SPINK6Q6UWN8 80 aa10.53□□□□□ -0.72
NDC1-201ENST00000371429 FHL3Q13643 280 aa10.53□□□□□ -0.72
NDC1-201ENST00000371429 IGLV5-52A0A0A0MRZ9 124 aa10.52□□□□□ -0.72
NDC1-201ENST00000371429 TRBV30A0A0K0K1B3 111 aa10.52□□□□□ -0.72
NDC1-201ENST00000371429 USP17L23D6RBM5 183 aa10.52□□□□□ -0.72
NDC1-201ENST00000371429 UPK3BQ9BT76 320 aa10.52□□□□□ -0.73
NDC1-201ENST00000371429 ZNF73O43830 326 aaPredicted RBP10.52□□□□□ -0.73
NDC1-201ENST00000371429 POM121L12Q8N7R1 296 aa10.52□□□□□ -0.73
NDC1-201ENST00000371429 LINC00694P0DN24 101 aa10.52□□□□□ -0.73
NDC1-201ENST00000371429 KRTAP24-1Q3LI83 254 aa10.51□□□□□ -0.73
NDC1-201ENST00000371429 C1orf134Q5TEV5 83 aa10.51□□□□□ -0.73
NDC1-201ENST00000371429 COX8CQ7Z4L0 72 aa10.51□□□□□ -0.73
NDC1-201ENST00000371429 TMEM258P61165 79 aa10.51□□□□□ -0.73
NDC1-201ENST00000371429 LINC00643Q86TS7 51 aa10.51□□□□□ -0.73
NDC1-201ENST00000371429 C6orf223Q8N319 242 aa10.51□□□□□ -0.73
NDC1-201ENST00000371429 M0QXV9 152 aa10.5□□□□□ -0.73
NDC1-201ENST00000371429 SMIM20Q8N5G0 67 aa10.5□□□□□ -0.73
NDC1-201ENST00000371429 LYPD5Q6UWN5 251 aa10.5□□□□□ -0.73
NDC1-201ENST00000371429 TEX49A0A1B0GTD5 131 aa10.5□□□□□ -0.73
NDC1-201ENST00000371429 SS18L2Q9UHA2 77 aa10.5□□□□□ -0.73
NDC1-201ENST00000371429 WFDC10BQ8IUB3 73 aa10.5□□□□□ -0.73
NDC1-201ENST00000371429 IGLV9-49A0A0B4J1Y8 123 aa10.48□□□□□ -0.73
NDC1-201ENST00000371429 SMIM1B2RUZ4 78 aa10.48□□□□□ -0.73
NDC1-201ENST00000371429 C9orf116Q5BN46 136 aaPredicted RBP10.48□□□□□ -0.73
NDC1-201ENST00000371429 HRCT1Q6UXD1 115 aa10.48□□□□□ -0.73
NDC1-201ENST00000371429 SCXQ7RTU7 201 aa10.48□□□□□ -0.73
NDC1-201ENST00000371429 SMIM11BQ8TCY0 68 aa10.48□□□□□ -0.73
NDC1-201ENST00000371429 C3orf84H3BNL1 204 aa10.48□□□□□ -0.73
NDC1-201ENST00000371429 Q6ZSN1 163 aa10.48□□□□□ -0.73
NDC1-201ENST00000371429 COL4A2P08572 1712 aa10.48□□□□□ -0.73
NDC1-201ENST00000371429 AGRNO00468 2067 aa10.47□□□□□ -0.73
NDC1-201ENST00000371429 RPL28P46779 137 aaKnown RBP10.47□□□□□ -0.73
NDC1-201ENST00000371429 CSDC2Q9Y534 153 aaKnown RBP10.47□□□□□ -0.73
NDC1-201ENST00000371429 PRRC2CQ9Y520 2896 aaKnown RBP10.46□□□□□ -0.73
NDC1-201ENST00000371429 A0A1B0GUV1 79 aa10.45□□□□□ -0.74
NDC1-201ENST00000371429 C5orf47Q569G3 176 aa10.45□□□□□ -0.74
NDC1-201ENST00000371429 B5MCH6 92 aa10.45□□□□□ -0.74
NDC1-201ENST00000371429 COX6A2Q02221 97 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 179.1 ms