RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 FCER1GP30273 86 aa9.33□□□□□ -0.92
SSR4-204ENST00000370087 SYCNQ0VAF6 134 aa9.33□□□□□ -0.92
SSR4-204ENST00000370087 LCE2AQ5TA79 106 aaPredicted RBP9.33□□□□□ -0.92
SSR4-204ENST00000370087 TMEM136Q6ZRR5 245 aa9.33□□□□□ -0.92
SSR4-204ENST00000370087 LAMTOR2Q9Y2Q5 125 aa9.33□□□□□ -0.92
SSR4-204ENST00000370087 TRBV24-1A0A075B6N3 115 aa9.32□□□□□ -0.92
SSR4-204ENST00000370087 TRBV27A0A0K0K1C4 114 aa9.32□□□□□ -0.92
SSR4-204ENST00000370087 LINC00959A0A1B0GUT2 108 aa9.32□□□□□ -0.92
SSR4-204ENST00000370087 TNFRSF6BO95407 300 aa9.32□□□□□ -0.92
SSR4-204ENST00000370087 MT-ND6P03923 174 aa9.32□□□□□ -0.92
SSR4-204ENST00000370087 SMAGPQ0VAQ4 97 aa9.32□□□□□ -0.92
SSR4-204ENST00000370087 C1orf137Q5JT78 98 aa9.32□□□□□ -0.92
SSR4-204ENST00000370087 PHF5AQ7RTV0 110 aaKnown RBP9.32□□□□□ -0.92
SSR4-204ENST00000370087 CBLN2Q8IUK8 224 aa9.32□□□□□ -0.92
SSR4-204ENST00000370087 NRACQ8N912 160 aa9.32□□□□□ -0.92
SSR4-204ENST00000370087 OR5A1Q8NGJ0 315 aa9.32□□□□□ -0.92
SSR4-204ENST00000370087 PKIGQ9Y2B9 76 aa9.32□□□□□ -0.92
SSR4-204ENST00000370087 H7C423 109 aa9.31□□□□□ -0.92
SSR4-204ENST00000370087 POLR2KP53803 58 aaKnown RBP9.31□□□□□ -0.92
SSR4-204ENST00000370087 PRELID3AQ96N28 172 aa9.31□□□□□ -0.92
SSR4-204ENST00000370087 GNB1LQ9BYB4 327 aa9.31□□□□□ -0.92
SSR4-204ENST00000370087 LOC107984640A0A0U1RRK4 108 aa9.3□□□□□ -0.92
SSR4-204ENST00000370087 RPL32P62910 135 aaKnown RBP9.3□□□□□ -0.92
SSR4-204ENST00000370087 C9orf116Q5BN46 136 aaPredicted RBP9.3□□□□□ -0.92
SSR4-204ENST00000370087 KRTAP11-1Q8IUC1 163 aa9.3□□□□□ -0.92
SSR4-204ENST00000370087 IGLV4-69A0A075B6H9 119 aa9.29□□□□□ -0.92
SSR4-204ENST00000370087 PRR4Q16378 134 aa9.29□□□□□ -0.92
SSR4-204ENST00000370087 TMEM18Q96B42 140 aa9.29□□□□□ -0.92
SSR4-204ENST00000370087 ZNF561-AS1K7EIQ3 104 aa9.28□□□□□ -0.92
SSR4-204ENST00000370087 TSHBP01222 138 aa9.28□□□□□ -0.92
SSR4-204ENST00000370087 RAB5AP20339 215 aa9.28□□□□□ -0.92
SSR4-204ENST00000370087 TMEM101Q96IK0 257 aa9.28□□□□□ -0.92
SSR4-204ENST00000370087 SMIM2Q9BVW6 85 aa9.28□□□□□ -0.92
SSR4-204ENST00000370087 MAP1LC3AQ9H492 121 aa9.28□□□□□ -0.92
SSR4-204ENST00000370087 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.27□□□□□ -0.93
SSR4-204ENST00000370087 NPYP01303 97 aa9.27□□□□□ -0.93
SSR4-204ENST00000370087 IGLV7-43P04211 117 aa9.27□□□□□ -0.93
SSR4-204ENST00000370087 KRTAP1-4P0C5Y4 121 aa9.27□□□□□ -0.93
SSR4-204ENST00000370087 ZNF25P17030 456 aaPredicted RBP9.27□□□□□ -0.93
SSR4-204ENST00000370087 A0A0U1RQV1 116 aa9.26□□□□□ -0.93
SSR4-204ENST00000370087 H0Y9J4 135 aa9.26□□□□□ -0.93
SSR4-204ENST00000370087 CD164L2Q6UWJ8 174 aa9.26□□□□□ -0.93
SSR4-204ENST00000370087 DIRC1Q969H9 104 aa9.26□□□□□ -0.93
SSR4-204ENST00000370087 SMCO4Q9NRQ5 59 aa9.26□□□□□ -0.93
SSR4-204ENST00000370087 RPL18AQ02543 176 aaKnown RBP9.25□□□□□ -0.93
SSR4-204ENST00000370087 TGIF2-C20orf24A0A0A6YYL0 155 aa9.24□□□□□ -0.93
SSR4-204ENST00000370087 PRSS47A8MTI9 375 aa9.24□□□□□ -0.93
SSR4-204ENST00000370087 K7EMI3 77 aa9.24□□□□□ -0.93
SSR4-204ENST00000370087 APOMO95445 188 aa9.24□□□□□ -0.93
SSR4-204ENST00000370087 ESDP10768 282 aa9.24□□□□□ -0.93
SSR4-204ENST00000370087 FABP9Q0Z7S8 132 aa9.24□□□□□ -0.93
SSR4-204ENST00000370087 MRPL18Q9H0U6 180 aaKnown RBP9.24□□□□□ -0.93
SSR4-204ENST00000370087 NXT2Q9NPJ8 142 aaKnown RBP9.24□□□□□ -0.93
SSR4-204ENST00000370087 MUC17Q685J3 4493 aa9.23□□□□□ -0.93
SSR4-204ENST00000370087 LOC389332A0A1B0GUA5 103 aa9.23□□□□□ -0.93
SSR4-204ENST00000370087 G0S2P27469 103 aa9.23□□□□□ -0.93
SSR4-204ENST00000370087 SS18Q15532 418 aa9.23□□□□□ -0.93
SSR4-204ENST00000370087 OPRPNQ99935 248 aaPredicted RBP9.23□□□□□ -0.93
SSR4-204ENST00000370087 CDC42SE2Q9NRR3 84 aa9.23□□□□□ -0.93
SSR4-204ENST00000370087 TRAPPC1Q9Y5R8 145 aa9.23□□□□□ -0.93
SSR4-204ENST00000370087 FAM168BA1KXE4 195 aa9.22□□□□□ -0.93
SSR4-204ENST00000370087 KIAA1644Q3SXP7 199 aa9.22□□□□□ -0.93
SSR4-204ENST00000370087 MRPL52Q86TS9 123 aaKnown RBP9.22□□□□□ -0.93
SSR4-204ENST00000370087 Q8N8P6 123 aa9.22□□□□□ -0.93
SSR4-204ENST00000370087 CAMK2N2Q96S95 79 aa9.22□□□□□ -0.93
SSR4-204ENST00000370087 IGLV1-50A0A075B6I6 118 aa9.21□□□□□ -0.94
SSR4-204ENST00000370087 ORMDL2Q53FV1 153 aa9.21□□□□□ -0.94
SSR4-204ENST00000370087 YPEL4Q96NS1 127 aa9.2□□□□□ -0.94
SSR4-204ENST00000370087 TIMM21Q9BVV7 248 aa9.2□□□□□ -0.94
SSR4-204ENST00000370087 CSDC2Q9Y534 153 aaKnown RBP9.2□□□□□ -0.94
SSR4-204ENST00000370087 A0A087WZ39 114 aa9.19□□□□□ -0.94
SSR4-204ENST00000370087 COX7A2LO14548 114 aa9.19□□□□□ -0.94
SSR4-204ENST00000370087 MALP21145 153 aa9.19□□□□□ -0.94
SSR4-204ENST00000370087 RNASE13Q5GAN3 156 aaKnown RBP9.19□□□□□ -0.94
SSR4-204ENST00000370087 ALKBH7Q9BT30 221 aaPredicted RBP9.19□□□□□ -0.94
SSR4-204ENST00000370087 SPANXA1Q9NS26 97 aa9.19□□□□□ -0.94
SSR4-204ENST00000370087 KRTAP7-1Q8IUC3 87 aa9.18□□□□□ -0.94
SSR4-204ENST00000370087 C2orf48Q96LS8 159 aa9.18□□□□□ -0.94
SSR4-204ENST00000370087 UBE2D4Q9Y2X8 147 aa9.18□□□□□ -0.94
SSR4-204ENST00000370087 IFI27P40305 119 aaPredicted RBP9.17□□□□□ -0.94
SSR4-204ENST00000370087 C5orf38Q86SI9 138 aa9.17□□□□□ -0.94
SSR4-204ENST00000370087 CYSLTR1Q9Y271 337 aa9.17□□□□□ -0.94
SSR4-204ENST00000370087 LINC01549A6NIU2 74 aa9.16□□□□□ -0.94
SSR4-204ENST00000370087 COLCA2A8K830 154 aa9.16□□□□□ -0.94
SSR4-204ENST00000370087 SPAG11BQ08648 103 aa9.16□□□□□ -0.94
SSR4-204ENST00000370087 FA2HQ7L5A8 372 aa9.16□□□□□ -0.94
SSR4-204ENST00000370087 FAM19A5Q7Z5A7 132 aaPredicted RBP9.16□□□□□ -0.94
SSR4-204ENST00000370087 UBE2D1P51668 147 aa9.15□□□□□ -0.94
SSR4-204ENST00000370087 RAB5BP61020 215 aa9.15□□□□□ -0.94
SSR4-204ENST00000370087 RPL39P62891 51 aaKnown RBP9.15□□□□□ -0.94
SSR4-204ENST00000370087 C1orf196B1AJZ1 125 aa9.14□□□□□ -0.95
SSR4-204ENST00000370087 MRPS36P82909 103 aaKnown RBP9.14□□□□□ -0.95
SSR4-204ENST00000370087 RNF151Q2KHN1 245 aa9.14□□□□□ -0.95
SSR4-204ENST00000370087 PAPPA-AS1Q5QFB9 102 aa9.14□□□□□ -0.95
SSR4-204ENST00000370087 C10orf25Q5T742 122 aa9.14□□□□□ -0.95
SSR4-204ENST00000370087 C2orf66Q6UXQ4 117 aa9.14□□□□□ -0.95
SSR4-204ENST00000370087 Q6ZN92 141 aa9.14□□□□□ -0.95
SSR4-204ENST00000370087 PYGO1Q9Y3Y4 419 aa9.14□□□□□ -0.95
SSR4-204ENST00000370087 TRAV13-1A0A0B4J241 112 aa9.13□□□□□ -0.95
SSR4-204ENST00000370087 TSPAN13O95857 204 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 389.1 ms